RNA–Protein interactions for RNA: ENST00000595049.5

SIN3B-205, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-205ENST00000595049 NISCHQ9Y2I1 1504 aa51.79■■■■■ 5.88
SIN3B-205ENST00000595049 CCDC180Q9P1Z9 1646 aa45.9■■■■■ 4.94
SIN3B-205ENST00000595049 ABCC9O60706 1549 aa44.78■■■■■ 4.76
SIN3B-205ENST00000595049 DCAF8L2P0C7V8 631 aa43.19■■■■■ 4.5
SIN3B-205ENST00000595049 ZCCHC6Q5VYS8 1495 aaKnown RBP43.16■■■■■ 4.5
SIN3B-205ENST00000595049 NACADO15069 1562 aa43.12■■■■■ 4.49
SIN3B-205ENST00000595049 RB1CC1Q8TDY2 1594 aa43.11■■■■■ 4.49
SIN3B-205ENST00000595049 MYO15BQ96JP2 1530 aa42.93■■■■■ 4.46
SIN3B-205ENST00000595049 DCAF1Q9Y4B6 1507 aa42.83■■■■■ 4.45
SIN3B-205ENST00000595049 UNC13AQ9UPW8 1703 aa42.23■■■■■ 4.35
SIN3B-205ENST00000595049 SCRIBQ14160 1630 aa41.93■■■■■ 4.3
SIN3B-205ENST00000595049 PABPN1Q86U42 306 aaKnown RBP eCLIP41.92■■■■■ 4.32e-6■□□□□ 9.6
SIN3B-205ENST00000595049 BICRAQ9NZM4 1560 aa41.89■■■■■ 4.3
SIN3B-205ENST00000595049 SHROOM4Q9ULL8 1493 aa41.33■■■■■ 4.21
SIN3B-205ENST00000595049 DNAJC5BQ9UF47 199 aa41.06■■■■■ 4.16
SIN3B-205ENST00000595049 EIF4G1Q04637 1599 aaKnown RBP40.71■■■■■ 4.11
SIN3B-205ENST00000595049 CC2D2AQ9P2K1 1620 aa40.52■■■■■ 4.08
SIN3B-205ENST00000595049 CECR2Q9BXF3 1484 aa40.38■■■■■ 4.05
SIN3B-205ENST00000595049 SMARCA4P51532 1647 aa40.13■■■■■ 4.01
SIN3B-205ENST00000595049 BAZ1AQ9NRL2 1556 aaPredicted RBP40.07■■■■■ 4.01
SIN3B-205ENST00000595049 MROH2BQ7Z745 1585 aa39.94■■■■□ 3.98
SIN3B-205ENST00000595049 ATAD2BQ9ULI0 1458 aa39.88■■■■□ 3.98
SIN3B-205ENST00000595049 NCAPD3P42695 1498 aa39.82■■■■□ 3.97
SIN3B-205ENST00000595049 SMARCA2P51531 1590 aa39.78■■■■□ 3.96
SIN3B-205ENST00000595049 PEG3Q9GZU2 1588 aa39.73■■■■□ 3.95
SIN3B-205ENST00000595049 HMGXB3Q12766 1538 aa39.6■■■■□ 3.93
SIN3B-205ENST00000595049 RSF1Q96T23 1441 aaPredicted RBP39.56■■■■□ 3.92
SIN3B-205ENST00000595049 WIZO95785 1651 aa39.52■■■■□ 3.92
SIN3B-205ENST00000595049 BAZ1BQ9UIG0 1483 aaKnown RBP39.51■■■■□ 3.92
SIN3B-205ENST00000595049 TOP2AP11388 1531 aaKnown RBP39.06■■■■□ 3.84
SIN3B-205ENST00000595049 NESP48681 1621 aa38.85■■■■□ 3.81
SIN3B-205ENST00000595049 LAMC3Q9Y6N6 1575 aa38.7■■■■□ 3.79
SIN3B-205ENST00000595049 SUPT5HO00267 1087 aaKnown RBP38.69■■■■□ 3.78
SIN3B-205ENST00000595049 CADPSQ9ULU8 1353 aa38.67■■■■□ 3.78
SIN3B-205ENST00000595049 CCDC88BA6NC98 1476 aa38.66■■■■□ 3.78
SIN3B-205ENST00000595049 ERCC6Q03468 1493 aa38.5■■■■□ 3.75
SIN3B-205ENST00000595049 CFTRP13569 1480 aa38.47■■■■□ 3.75
SIN3B-205ENST00000595049 PDS5BQ9NTI5 1447 aa38.43■■■■□ 3.74
SIN3B-205ENST00000595049 KIF21AQ7Z4S6 1674 aa38.36■■■■□ 3.73
SIN3B-205ENST00000595049 FANCD2Q9BXW9 1451 aa38.21■■■■□ 3.71
SIN3B-205ENST00000595049 PRDM2Q13029 1718 aa38.18■■■■□ 3.7
SIN3B-205ENST00000595049 THOC2Q8NI27 1593 aaKnown RBP38.17■■■■□ 3.7
SIN3B-205ENST00000595049 CEP164Q9UPV0 1460 aa38.11■■■■□ 3.69
SIN3B-205ENST00000595049 CUX2O14529 1486 aa38.04■■■■□ 3.68
SIN3B-205ENST00000595049 MRC2Q9UBG0 1479 aa38.03■■■■□ 3.68
SIN3B-205ENST00000595049 WDR62O43379 1518 aa37.91■■■■□ 3.66
SIN3B-205ENST00000595049 URB2Q14146 1524 aaKnown RBP37.86■■■■□ 3.65
SIN3B-205ENST00000595049 TOPBP1Q92547 1522 aa37.64■■■■□ 3.62
SIN3B-205ENST00000595049 ABCC8Q09428 1581 aa37.59■■■■□ 3.61
SIN3B-205ENST00000595049 DNMBPQ6XZF7 1577 aa37.59■■■■□ 3.61
SIN3B-205ENST00000595049 CUX1P39880 1505 aa37.45■■■■□ 3.59
SIN3B-205ENST00000595049 POLA1P09884 1462 aaPredicted RBP37.33■■■■□ 3.57
SIN3B-205ENST00000595049 IFT140Q96RY7 1462 aa37.32■■■■□ 3.56
SIN3B-205ENST00000595049 FGD5Q6ZNL6 1462 aa37.26■■■■□ 3.56
SIN3B-205ENST00000595049 WRNQ14191 1432 aaPredicted RBP eCLIP37.24■■■■□ 3.55
SIN3B-205ENST00000595049 TARBP1Q13395 1621 aaKnown RBP37.23■■■■□ 3.55
SIN3B-205ENST00000595049 RAD54L2Q9Y4B4 1467 aa37.2■■■■□ 3.55
SIN3B-205ENST00000595049 ZNF608Q9ULD9 1512 aaPredicted RBP37.2■■■■□ 3.55
SIN3B-205ENST00000595049 SOGA1O94964 1423 aa37.19■■■■□ 3.54
SIN3B-205ENST00000595049 SYNJ1O43426 1573 aa37.17■■■■□ 3.54
SIN3B-205ENST00000595049 TOP2BQ02880 1626 aa37.14■■■■□ 3.54
SIN3B-205ENST00000595049 BIVM-ERCC5R4GMW8 1640 aa37.14■■■■□ 3.54
SIN3B-205ENST00000595049 AQRO60306 1485 aaKnown RBP eCLIP37.01■■■■□ 3.521e-12■■■■■ 44.1
SIN3B-205ENST00000595049 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
SIN3B-205ENST00000595049 TDRD9Q8NDG6 1382 aaKnown RBP36.97■■■■□ 3.51
SIN3B-205ENST00000595049 WDR97A6NE52 1622 aa36.95■■■■□ 3.51
SIN3B-205ENST00000595049 ABCA10Q8WWZ4 1543 aa36.91■■■■□ 3.5
SIN3B-205ENST00000595049 DNAJC5Q9H3Z4 198 aa36.75■■■■□ 3.47
SIN3B-205ENST00000595049 GAPVD1Q14C86 1478 aa36.74■■■■□ 3.47
SIN3B-205ENST00000595049 ABCA5Q8WWZ7 1642 aa36.74■■■■□ 3.47
SIN3B-205ENST00000595049 GRIN2BQ13224 1484 aa36.69■■■■□ 3.46
SIN3B-205ENST00000595049 PBRM1Q86U86 1689 aa36.64■■■■□ 3.46
SIN3B-205ENST00000595049 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
SIN3B-205ENST00000595049 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
SIN3B-205ENST00000595049 OSCARQ8IYS5 282 aa36.56■■■■□ 3.44
SIN3B-205ENST00000595049 CHD1O14646 1710 aa36.53■■■■□ 3.44
SIN3B-205ENST00000595049 TRIM41Q8WV44 630 aa36.5■■■■□ 3.43
SIN3B-205ENST00000595049 FBLN2P98095 1184 aa36.48■■■■□ 3.43
SIN3B-205ENST00000595049 ERICH3Q5RHP9 1530 aa36.45■■■■□ 3.43
SIN3B-205ENST00000595049 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
SIN3B-205ENST00000595049 KIF27Q86VH2 1401 aa36.42■■■■□ 3.42
SIN3B-205ENST00000595049 CHMP7Q8WUX9 453 aaPredicted RBP36.41■■■■□ 3.42
SIN3B-205ENST00000595049 ADAMTS12P58397 1594 aa36.36■■■■□ 3.41
SIN3B-205ENST00000595049 IGF1RP08069 1367 aa36.34■■■■□ 3.41
SIN3B-205ENST00000595049 FHAD1B1AJZ9 1412 aa36.32■■■■□ 3.4
SIN3B-205ENST00000595049 RUSC2Q8N2Y8 1516 aa36.28■■■■□ 3.4
SIN3B-205ENST00000595049 CHIC1Q5VXU3 224 aa36.27■■■■□ 3.4
SIN3B-205ENST00000595049 GRIN2AQ12879 1464 aa36.23■■■■□ 3.39
SIN3B-205ENST00000595049 CLASP1Q7Z460 1538 aa36.13■■■■□ 3.38
SIN3B-205ENST00000595049 CUL7Q14999 1698 aa36.13■■■■□ 3.37
SIN3B-205ENST00000595049 CARMIL1Q5VZK9 1371 aa36.09■■■■□ 3.37
SIN3B-205ENST00000595049 NUP160Q12769 1436 aa36.08■■■■□ 3.37
SIN3B-205ENST00000595049 CEP170Q5SW79 1584 aa36.06■■■■□ 3.36
SIN3B-205ENST00000595049 RIMBP3CA6NJZ7 1639 aa35.95■■■■□ 3.35
SIN3B-205ENST00000595049 RIMBP3BA6NNM3 1639 aa35.95■■■■□ 3.35
SIN3B-205ENST00000595049 RIMBP3Q9UFD9 1639 aa35.95■■■■□ 3.35
SIN3B-205ENST00000595049 ARHGEF11O15085 1522 aa35.95■■■■□ 3.35
SIN3B-205ENST00000595049 RAPGEF2Q9Y4G8 1499 aa35.87■■■■□ 3.33
SIN3B-205ENST00000595049 CSRNP3Q8WYN3 585 aa35.85■■■■□ 3.33
SIN3B-205ENST00000595049 EEA1Q15075 1411 aa35.83■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms