RNA–Protein interactions for RNA: ENST00000594998.1

MED25-206, Transcript of mediator complex subunit 25, humanhuman

TSL 1 (best)

Gene MED25, Length 3,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED25-206ENST00000594998 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
MED25-206ENST00000594998 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.09
MED25-206ENST00000594998 MYO15BQ96JP2 1530 aa20.57■□□□□ 0.88
MED25-206ENST00000594998 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
MED25-206ENST00000594998 NACADO15069 1562 aa20.11■□□□□ 0.81
MED25-206ENST00000594998 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
MED25-206ENST00000594998 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
MED25-206ENST00000594998 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
MED25-206ENST00000594998 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
MED25-206ENST00000594998 ABCC9O60706 1549 aa19.62■□□□□ 0.73
MED25-206ENST00000594998 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
MED25-206ENST00000594998 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
MED25-206ENST00000594998 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
MED25-206ENST00000594998 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
MED25-206ENST00000594998 HRCP23327 699 aa18.65■□□□□ 0.58
MED25-206ENST00000594998 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
MED25-206ENST00000594998 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
MED25-206ENST00000594998 HMGXB3Q12766 1538 aa18.56■□□□□ 0.56
MED25-206ENST00000594998 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
MED25-206ENST00000594998 MYT1Q01538 1121 aa18.48■□□□□ 0.55
MED25-206ENST00000594998 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
MED25-206ENST00000594998 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
MED25-206ENST00000594998 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
MED25-206ENST00000594998 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
MED25-206ENST00000594998 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
MED25-206ENST00000594998 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
MED25-206ENST00000594998 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
MED25-206ENST00000594998 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
MED25-206ENST00000594998 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.47
MED25-206ENST00000594998 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
MED25-206ENST00000594998 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
MED25-206ENST00000594998 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
MED25-206ENST00000594998 CUX2O14529 1486 aa17.87■□□□□ 0.45
MED25-206ENST00000594998 TOP2AP11388 1531 aaKnown RBP17.84■□□□□ 0.45
MED25-206ENST00000594998 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
MED25-206ENST00000594998 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.43
MED25-206ENST00000594998 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
MED25-206ENST00000594998 WDR62O43379 1518 aa17.7■□□□□ 0.42
MED25-206ENST00000594998 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
MED25-206ENST00000594998 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
MED25-206ENST00000594998 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
MED25-206ENST00000594998 WIZO95785 1651 aa17.64■□□□□ 0.41
MED25-206ENST00000594998 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
MED25-206ENST00000594998 CFTRP13569 1480 aa17.51■□□□□ 0.39
MED25-206ENST00000594998 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
MED25-206ENST00000594998 BCL11AQ9H165 835 aa17.45■□□□□ 0.38
MED25-206ENST00000594998 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
MED25-206ENST00000594998 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
MED25-206ENST00000594998 ACIN1Q9UKV3 1341 aaKnown RBP17.43■□□□□ 0.38
MED25-206ENST00000594998 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
MED25-206ENST00000594998 PRKCSHP14314 528 aaPredicted RBP17.37■□□□□ 0.37
MED25-206ENST00000594998 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
MED25-206ENST00000594998 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
MED25-206ENST00000594998 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
MED25-206ENST00000594998 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
MED25-206ENST00000594998 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.36
MED25-206ENST00000594998 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
MED25-206ENST00000594998 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
MED25-206ENST00000594998 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
MED25-206ENST00000594998 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
MED25-206ENST00000594998 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
MED25-206ENST00000594998 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
MED25-206ENST00000594998 NESP48681 1621 aa17.1■□□□□ 0.33
MED25-206ENST00000594998 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
MED25-206ENST00000594998 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
MED25-206ENST00000594998 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.33
MED25-206ENST00000594998 TRIM26Q12899 539 aaPredicted RBP17.08■□□□□ 0.32
MED25-206ENST00000594998 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
MED25-206ENST00000594998 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
MED25-206ENST00000594998 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
MED25-206ENST00000594998 IFT140Q96RY7 1462 aa17.02■□□□□ 0.31
MED25-206ENST00000594998 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
MED25-206ENST00000594998 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
MED25-206ENST00000594998 EIF4G3O43432 1585 aaKnown RBP16.96■□□□□ 0.31
MED25-206ENST00000594998 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
MED25-206ENST00000594998 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
MED25-206ENST00000594998 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
MED25-206ENST00000594998 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
MED25-206ENST00000594998 ANP32EQ9BTT0 268 aa16.86■□□□□ 0.29
MED25-206ENST00000594998 CHD1O14646 1710 aa16.84■□□□□ 0.29
MED25-206ENST00000594998 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
MED25-206ENST00000594998 CUX1P39880 1505 aa16.81■□□□□ 0.28
MED25-206ENST00000594998 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
MED25-206ENST00000594998 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
MED25-206ENST00000594998 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
MED25-206ENST00000594998 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
MED25-206ENST00000594998 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
MED25-206ENST00000594998 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
MED25-206ENST00000594998 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
MED25-206ENST00000594998 CUL7Q14999 1698 aa16.73■□□□□ 0.27
MED25-206ENST00000594998 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
MED25-206ENST00000594998 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
MED25-206ENST00000594998 APLP2Q06481 763 aa16.6■□□□□ 0.25
MED25-206ENST00000594998 RIMBP3CA6NJZ7 1639 aa16.57■□□□□ 0.24
MED25-206ENST00000594998 RIMBP3BA6NNM3 1639 aa16.57■□□□□ 0.24
MED25-206ENST00000594998 RIMBP3Q9UFD9 1639 aa16.57■□□□□ 0.24
MED25-206ENST00000594998 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
MED25-206ENST00000594998 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
MED25-206ENST00000594998 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.24
MED25-206ENST00000594998 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms