RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 NISCHQ9Y2I1 1504 aa40.46■■■■■ 4.07
CAPN12-203ENST00000594497 CCDC180Q9P1Z9 1646 aa36.34■■■■□ 3.41
CAPN12-203ENST00000594497 ABCC9O60706 1549 aa36.14■■■■□ 3.38
CAPN12-203ENST00000594497 RB1CC1Q8TDY2 1594 aa34.5■■■■□ 3.11
CAPN12-203ENST00000594497 NACADO15069 1562 aa34.28■■■■□ 3.08
CAPN12-203ENST00000594497 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
CAPN12-203ENST00000594497 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
CAPN12-203ENST00000594497 UNC13AQ9UPW8 1703 aa33.78■■■■□ 3
CAPN12-203ENST00000594497 DNAJC5BQ9UF47 199 aa33.74■■■□□ 2.99
CAPN12-203ENST00000594497 PABPN1Q86U42 306 aaKnown RBP eCLIP33.61■■■□□ 2.974e-10■■□□□ 14
CAPN12-203ENST00000594497 ZCCHC6Q5VYS8 1495 aaKnown RBP33.56■■■□□ 2.96
CAPN12-203ENST00000594497 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
CAPN12-203ENST00000594497 DCAF1Q9Y4B6 1507 aa33.45■■■□□ 2.95
CAPN12-203ENST00000594497 SCRIBQ14160 1630 aa33.07■■■□□ 2.88
CAPN12-203ENST00000594497 SHROOM4Q9ULL8 1493 aa33.06■■■□□ 2.88
CAPN12-203ENST00000594497 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
CAPN12-203ENST00000594497 EIF4G1Q04637 1599 aaKnown RBP32.65■■■□□ 2.82
CAPN12-203ENST00000594497 CECR2Q9BXF3 1484 aa32.55■■■□□ 2.8
CAPN12-203ENST00000594497 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
CAPN12-203ENST00000594497 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
CAPN12-203ENST00000594497 ATAD2BQ9ULI0 1458 aa31.53■■■□□ 2.64
CAPN12-203ENST00000594497 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
CAPN12-203ENST00000594497 HMGXB3Q12766 1538 aa31.43■■■□□ 2.62
CAPN12-203ENST00000594497 BAZ1AQ9NRL2 1556 aaPredicted RBP31.42■■■□□ 2.62
CAPN12-203ENST00000594497 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.6
CAPN12-203ENST00000594497 BAZ1BQ9UIG0 1483 aaKnown RBP31.26■■■□□ 2.59
CAPN12-203ENST00000594497 ERCC6Q03468 1493 aa31.22■■■□□ 2.59
CAPN12-203ENST00000594497 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
CAPN12-203ENST00000594497 CUX2O14529 1486 aa31.14■■■□□ 2.57
CAPN12-203ENST00000594497 NESP48681 1621 aa31.07■■■□□ 2.56
CAPN12-203ENST00000594497 LAMC3Q9Y6N6 1575 aa30.93■■■□□ 2.54
CAPN12-203ENST00000594497 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
CAPN12-203ENST00000594497 WIZO95785 1651 aa30.83■■■□□ 2.53
CAPN12-203ENST00000594497 THOC2Q8NI27 1593 aaKnown RBP30.79■■■□□ 2.52
CAPN12-203ENST00000594497 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
CAPN12-203ENST00000594497 PDS5BQ9NTI5 1447 aa30.71■■■□□ 2.51
CAPN12-203ENST00000594497 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
CAPN12-203ENST00000594497 RSF1Q96T23 1441 aaPredicted RBP30.54■■■□□ 2.48
CAPN12-203ENST00000594497 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
CAPN12-203ENST00000594497 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
CAPN12-203ENST00000594497 WDR62O43379 1518 aa30.38■■■□□ 2.45
CAPN12-203ENST00000594497 CEP164Q9UPV0 1460 aa30.36■■■□□ 2.45
CAPN12-203ENST00000594497 CFTRP13569 1480 aa30.33■■■□□ 2.45
CAPN12-203ENST00000594497 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
CAPN12-203ENST00000594497 PRDM2Q13029 1718 aa30.17■■■□□ 2.42
CAPN12-203ENST00000594497 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
CAPN12-203ENST00000594497 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
CAPN12-203ENST00000594497 TOPBP1Q92547 1522 aa29.76■■■□□ 2.36
CAPN12-203ENST00000594497 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
CAPN12-203ENST00000594497 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
CAPN12-203ENST00000594497 DNMBPQ6XZF7 1577 aa29.69■■■□□ 2.34
CAPN12-203ENST00000594497 OSCARQ8IYS5 282 aa29.68■■■□□ 2.34
CAPN12-203ENST00000594497 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
CAPN12-203ENST00000594497 TRIM41Q8WV44 630 aa29.62■■■□□ 2.33
CAPN12-203ENST00000594497 EIF4G3O43432 1585 aaKnown RBP29.56■■■□□ 2.32
CAPN12-203ENST00000594497 TARBP1Q13395 1621 aaKnown RBP29.52■■■□□ 2.32
CAPN12-203ENST00000594497 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
CAPN12-203ENST00000594497 AQRO60306 1485 aaKnown RBP eCLIP29.39■■■□□ 2.32e-12■■■■□ 26.1
CAPN12-203ENST00000594497 RIMBP3CA6NJZ7 1639 aa29.35■■■□□ 2.29
CAPN12-203ENST00000594497 RIMBP3BA6NNM3 1639 aa29.35■■■□□ 2.29
CAPN12-203ENST00000594497 RIMBP3Q9UFD9 1639 aa29.35■■■□□ 2.29
CAPN12-203ENST00000594497 CHD1O14646 1710 aa29.34■■■□□ 2.29
CAPN12-203ENST00000594497 RAD54L2Q9Y4B4 1467 aa29.33■■■□□ 2.29
CAPN12-203ENST00000594497 SOGA1O94964 1423 aa29.31■■■□□ 2.28
CAPN12-203ENST00000594497 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
CAPN12-203ENST00000594497 CUX1P39880 1505 aa29.29■■■□□ 2.28
CAPN12-203ENST00000594497 WDR97A6NE52 1622 aa29.26■■■□□ 2.27
CAPN12-203ENST00000594497 ARHGEF11O15085 1522 aa29.25■■■□□ 2.27
CAPN12-203ENST00000594497 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
CAPN12-203ENST00000594497 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
CAPN12-203ENST00000594497 FBLN2P98095 1184 aa29.17■■■□□ 2.26
CAPN12-203ENST00000594497 SNAPC4Q5SXM2 1469 aa29.13■■■□□ 2.25
CAPN12-203ENST00000594497 MAGI1Q96QZ7 1491 aaPredicted RBP29.07■■■□□ 2.24
CAPN12-203ENST00000594497 GRIN2BQ13224 1484 aa29.06■■■□□ 2.24
CAPN12-203ENST00000594497 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
CAPN12-203ENST00000594497 SYNJ1O43426 1573 aa28.98■■■□□ 2.23
CAPN12-203ENST00000594497 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
CAPN12-203ENST00000594497 ABCA10Q8WWZ4 1543 aa28.98■■■□□ 2.23
CAPN12-203ENST00000594497 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
CAPN12-203ENST00000594497 CYB5RLQ6IPT4 315 aa28.97■■■□□ 2.23
CAPN12-203ENST00000594497 CLASP1Q7Z460 1538 aa28.97■■■□□ 2.23
CAPN12-203ENST00000594497 SYNJ2O15056 1496 aa28.96■■■□□ 2.23
CAPN12-203ENST00000594497 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
CAPN12-203ENST00000594497 ABCA5Q8WWZ7 1642 aa28.95■■■□□ 2.23
CAPN12-203ENST00000594497 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
CAPN12-203ENST00000594497 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
CAPN12-203ENST00000594497 WRNQ14191 1432 aaPredicted RBP eCLIP28.86■■■□□ 2.21
CAPN12-203ENST00000594497 ADAMTS12P58397 1594 aa28.72■■■□□ 2.19
CAPN12-203ENST00000594497 GRIN2AQ12879 1464 aa28.69■■■□□ 2.18
CAPN12-203ENST00000594497 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
CAPN12-203ENST00000594497 ERICH3Q5RHP9 1530 aa28.63■■■□□ 2.17
CAPN12-203ENST00000594497 FHAD1B1AJZ9 1412 aa28.61■■■□□ 2.17
CAPN12-203ENST00000594497 CEP170Q5SW79 1584 aa28.6■■■□□ 2.17
CAPN12-203ENST00000594497 NUP160Q12769 1436 aa28.59■■■□□ 2.17
CAPN12-203ENST00000594497 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
CAPN12-203ENST00000594497 SHROOM2Q13796 1616 aa28.49■■■□□ 2.15
CAPN12-203ENST00000594497 RUSC2Q8N2Y8 1516 aa28.32■■■□□ 2.12
CAPN12-203ENST00000594497 KIF27Q86VH2 1401 aa28.28■■■□□ 2.12
CAPN12-203ENST00000594497 PRG4Q92954 1404 aaPredicted RBP28.28■■■□□ 2.12
CAPN12-203ENST00000594497 CUL7Q14999 1698 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms