RNA–Protein interactions for RNA: ENST00000594066.1

BRD4-204, Transcript of bromodomain containing 4, humanhuman

TSL 3

Gene BRD4, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-204ENST00000594066 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
BRD4-204ENST00000594066 ABCC9O60706 1549 aa27.56■■■□□ 2
BRD4-204ENST00000594066 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
BRD4-204ENST00000594066 DNAJC5BQ9UF47 199 aa26.25■■□□□ 1.79
BRD4-204ENST00000594066 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
BRD4-204ENST00000594066 NACADO15069 1562 aa25.78■■□□□ 1.72
BRD4-204ENST00000594066 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.7
BRD4-204ENST00000594066 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
BRD4-204ENST00000594066 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
BRD4-204ENST00000594066 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
BRD4-204ENST00000594066 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
BRD4-204ENST00000594066 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
BRD4-204ENST00000594066 CECR2Q9BXF3 1484 aa24.93■■□□□ 1.58
BRD4-204ENST00000594066 CC2D2AQ9P2K1 1620 aa24.84■■□□□ 1.57
BRD4-204ENST00000594066 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
BRD4-204ENST00000594066 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
BRD4-204ENST00000594066 DNAJC5Q9H3Z4 198 aa24.65■■□□□ 1.54
BRD4-204ENST00000594066 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.54
BRD4-204ENST00000594066 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
BRD4-204ENST00000594066 CUX2O14529 1486 aa24.06■■□□□ 1.44
BRD4-204ENST00000594066 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
BRD4-204ENST00000594066 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
BRD4-204ENST00000594066 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
BRD4-204ENST00000594066 SMARCA2P51531 1590 aa23.57■■□□□ 1.36
BRD4-204ENST00000594066 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
BRD4-204ENST00000594066 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
BRD4-204ENST00000594066 NESP48681 1621 aa23.46■■□□□ 1.35
BRD4-204ENST00000594066 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
BRD4-204ENST00000594066 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.34
BRD4-204ENST00000594066 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
BRD4-204ENST00000594066 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
BRD4-204ENST00000594066 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
BRD4-204ENST00000594066 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
BRD4-204ENST00000594066 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
BRD4-204ENST00000594066 PEG3Q9GZU2 1588 aa23.2■■□□□ 1.3
BRD4-204ENST00000594066 KIF21AQ7Z4S6 1674 aa23.12■■□□□ 1.29
BRD4-204ENST00000594066 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
BRD4-204ENST00000594066 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
BRD4-204ENST00000594066 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
BRD4-204ENST00000594066 OSCARQ8IYS5 282 aa22.97■■□□□ 1.27
BRD4-204ENST00000594066 WDR62O43379 1518 aa22.96■■□□□ 1.27
BRD4-204ENST00000594066 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
BRD4-204ENST00000594066 FANCD2Q9BXW9 1451 aa22.77■■□□□ 1.24
BRD4-204ENST00000594066 CFTRP13569 1480 aa22.66■■□□□ 1.22
BRD4-204ENST00000594066 WIZO95785 1651 aa22.65■■□□□ 1.22
BRD4-204ENST00000594066 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
BRD4-204ENST00000594066 RIMBP3CA6NJZ7 1639 aa22.51■■□□□ 1.19
BRD4-204ENST00000594066 RIMBP3BA6NNM3 1639 aa22.51■■□□□ 1.19
BRD4-204ENST00000594066 RIMBP3Q9UFD9 1639 aa22.51■■□□□ 1.19
BRD4-204ENST00000594066 IFT140Q96RY7 1462 aa22.45■■□□□ 1.18
BRD4-204ENST00000594066 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
BRD4-204ENST00000594066 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
BRD4-204ENST00000594066 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
BRD4-204ENST00000594066 TRHP20396 242 aaPredicted RBP22.4■■□□□ 1.18
BRD4-204ENST00000594066 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
BRD4-204ENST00000594066 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
BRD4-204ENST00000594066 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
BRD4-204ENST00000594066 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
BRD4-204ENST00000594066 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
BRD4-204ENST00000594066 FBLN2P98095 1184 aa22.23■■□□□ 1.15
BRD4-204ENST00000594066 EIF4G3O43432 1585 aaKnown RBP22.19■■□□□ 1.14
BRD4-204ENST00000594066 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
BRD4-204ENST00000594066 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
BRD4-204ENST00000594066 AQRO60306 1485 aaKnown RBP eCLIP22.13■■□□□ 1.132e-8■■□□□ 11.8
BRD4-204ENST00000594066 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
BRD4-204ENST00000594066 CHD1O14646 1710 aa22.09■■□□□ 1.13
BRD4-204ENST00000594066 TARBP1Q13395 1621 aaKnown RBP22.03■■□□□ 1.12
BRD4-204ENST00000594066 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
BRD4-204ENST00000594066 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
BRD4-204ENST00000594066 SOGA1O94964 1423 aa21.97■■□□□ 1.11
BRD4-204ENST00000594066 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
BRD4-204ENST00000594066 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
BRD4-204ENST00000594066 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
BRD4-204ENST00000594066 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
BRD4-204ENST00000594066 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
BRD4-204ENST00000594066 SNAPC4Q5SXM2 1469 aa21.88■■□□□ 1.09
BRD4-204ENST00000594066 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
BRD4-204ENST00000594066 CLASP1Q7Z460 1538 aa21.86■■□□□ 1.09
BRD4-204ENST00000594066 GRIN2BQ13224 1484 aa21.83■■□□□ 1.08
BRD4-204ENST00000594066 SYNJ2O15056 1496 aa21.8■■□□□ 1.08
BRD4-204ENST00000594066 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
BRD4-204ENST00000594066 GAPVD1Q14C86 1478 aa21.76■■□□□ 1.07
BRD4-204ENST00000594066 CUX1P39880 1505 aa21.62■■□□□ 1.05
BRD4-204ENST00000594066 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
BRD4-204ENST00000594066 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
BRD4-204ENST00000594066 GRIN2AQ12879 1464 aa21.5■■□□□ 1.03
BRD4-204ENST00000594066 ABCA5Q8WWZ7 1642 aa21.46■■□□□ 1.03
BRD4-204ENST00000594066 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
BRD4-204ENST00000594066 NPM1P06748 294 aaKnown RBP eCLIP21.43■■□□□ 1.02
BRD4-204ENST00000594066 NUP160Q12769 1436 aa21.43■■□□□ 1.02
BRD4-204ENST00000594066 WRNQ14191 1432 aaPredicted RBP eCLIP21.43■■□□□ 1.02
BRD4-204ENST00000594066 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
BRD4-204ENST00000594066 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
BRD4-204ENST00000594066 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
BRD4-204ENST00000594066 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
BRD4-204ENST00000594066 SHROOM2Q13796 1616 aa21.34■■□□□ 1.01
BRD4-204ENST00000594066 JPH4Q96JJ6 628 aa21.33■■□□□ 1.01
BRD4-204ENST00000594066 PRG4Q92954 1404 aaPredicted RBP21.32■■□□□ 1
BRD4-204ENST00000594066 KIF13AQ9H1H9 1805 aa21.29■■□□□ 1
BRD4-204ENST00000594066 ERICH3Q5RHP9 1530 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms