RNA–Protein interactions for RNA: ENST00000593899.5

SYMPK-203, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-203ENST00000593899 NISCHQ9Y2I1 1504 aa30.39■■■□□ 2.46
SYMPK-203ENST00000593899 ABCC9O60706 1549 aa27.11■■□□□ 1.93
SYMPK-203ENST00000593899 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
SYMPK-203ENST00000593899 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
SYMPK-203ENST00000593899 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
SYMPK-203ENST00000593899 NACADO15069 1562 aa25.47■■□□□ 1.67
SYMPK-203ENST00000593899 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.65
SYMPK-203ENST00000593899 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
SYMPK-203ENST00000593899 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
SYMPK-203ENST00000593899 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
SYMPK-203ENST00000593899 UNC13AQ9UPW8 1703 aa25.09■■□□□ 1.61
SYMPK-203ENST00000593899 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
SYMPK-203ENST00000593899 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
SYMPK-203ENST00000593899 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
SYMPK-203ENST00000593899 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
SYMPK-203ENST00000593899 CC2D2AQ9P2K1 1620 aa24.52■■□□□ 1.52
SYMPK-203ENST00000593899 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
SYMPK-203ENST00000593899 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
SYMPK-203ENST00000593899 DNAJC5Q9H3Z4 198 aa24.11■■□□□ 1.45
SYMPK-203ENST00000593899 CUX2O14529 1486 aa23.68■■□□□ 1.38
SYMPK-203ENST00000593899 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
SYMPK-203ENST00000593899 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
SYMPK-203ENST00000593899 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
SYMPK-203ENST00000593899 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
SYMPK-203ENST00000593899 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
SYMPK-203ENST00000593899 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
SYMPK-203ENST00000593899 MROH2BQ7Z745 1585 aa23.42■■□□□ 1.34
SYMPK-203ENST00000593899 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
SYMPK-203ENST00000593899 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
SYMPK-203ENST00000593899 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
SYMPK-203ENST00000593899 NESP48681 1621 aa23.16■■□□□ 1.3
SYMPK-203ENST00000593899 WIZO95785 1651 aa23.13■■□□□ 1.29
SYMPK-203ENST00000593899 THOC2Q8NI27 1593 aaKnown RBP23.13■■□□□ 1.29
SYMPK-203ENST00000593899 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
SYMPK-203ENST00000593899 LAMC3Q9Y6N6 1575 aa23.02■■□□□ 1.28
SYMPK-203ENST00000593899 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
SYMPK-203ENST00000593899 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
SYMPK-203ENST00000593899 PDS5BQ9NTI5 1447 aa22.85■■□□□ 1.25
SYMPK-203ENST00000593899 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
SYMPK-203ENST00000593899 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
SYMPK-203ENST00000593899 WDR62O43379 1518 aa22.71■■□□□ 1.23
SYMPK-203ENST00000593899 MRC2Q9UBG0 1479 aa22.7■■□□□ 1.22
SYMPK-203ENST00000593899 CFTRP13569 1480 aa22.67■■□□□ 1.22
SYMPK-203ENST00000593899 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
SYMPK-203ENST00000593899 FANCD2Q9BXW9 1451 aa22.53■■□□□ 1.2
SYMPK-203ENST00000593899 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
SYMPK-203ENST00000593899 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
SYMPK-203ENST00000593899 OSCARQ8IYS5 282 aa22.38■■□□□ 1.17
SYMPK-203ENST00000593899 URB2Q14146 1524 aaKnown RBP22.34■■□□□ 1.17
SYMPK-203ENST00000593899 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
SYMPK-203ENST00000593899 RIMBP3CA6NJZ7 1639 aa22.21■■□□□ 1.15
SYMPK-203ENST00000593899 RIMBP3BA6NNM3 1639 aa22.21■■□□□ 1.15
SYMPK-203ENST00000593899 RIMBP3Q9UFD9 1639 aa22.21■■□□□ 1.15
SYMPK-203ENST00000593899 TOPBP1Q92547 1522 aa22.17■■□□□ 1.14
SYMPK-203ENST00000593899 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
SYMPK-203ENST00000593899 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
SYMPK-203ENST00000593899 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
SYMPK-203ENST00000593899 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
SYMPK-203ENST00000593899 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
SYMPK-203ENST00000593899 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
SYMPK-203ENST00000593899 CUX1P39880 1505 aa21.96■■□□□ 1.11
SYMPK-203ENST00000593899 EIF4G3O43432 1585 aaKnown RBP21.96■■□□□ 1.11
SYMPK-203ENST00000593899 TARBP1Q13395 1621 aaKnown RBP21.96■■□□□ 1.11
SYMPK-203ENST00000593899 FGD5Q6ZNL6 1462 aa21.89■■□□□ 1.09
SYMPK-203ENST00000593899 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
SYMPK-203ENST00000593899 SOGA1O94964 1423 aa21.87■■□□□ 1.09
SYMPK-203ENST00000593899 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
SYMPK-203ENST00000593899 CHD1O14646 1710 aa21.85■■□□□ 1.09
SYMPK-203ENST00000593899 CYB5RLQ6IPT4 315 aa21.84■■□□□ 1.09
SYMPK-203ENST00000593899 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.098e-8■■■■■ 27.5
SYMPK-203ENST00000593899 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
SYMPK-203ENST00000593899 WDR97A6NE52 1622 aa21.76■■□□□ 1.07
SYMPK-203ENST00000593899 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
SYMPK-203ENST00000593899 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
SYMPK-203ENST00000593899 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
SYMPK-203ENST00000593899 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
SYMPK-203ENST00000593899 TRHP20396 242 aaPredicted RBP21.71■■□□□ 1.07
SYMPK-203ENST00000593899 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.06
SYMPK-203ENST00000593899 CLASP1Q7Z460 1538 aa21.66■■□□□ 1.06
SYMPK-203ENST00000593899 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
SYMPK-203ENST00000593899 GAPVD1Q14C86 1478 aa21.61■■□□□ 1.05
SYMPK-203ENST00000593899 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
SYMPK-203ENST00000593899 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
SYMPK-203ENST00000593899 FBLN2P98095 1184 aa21.6■■□□□ 1.05
SYMPK-203ENST00000593899 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.05
SYMPK-203ENST00000593899 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
SYMPK-203ENST00000593899 SYNJ2O15056 1496 aa21.51■■□□□ 1.03
SYMPK-203ENST00000593899 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
SYMPK-203ENST00000593899 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
SYMPK-203ENST00000593899 AEBP2Q6ZN18 517 aaPredicted RBP21.42■■□□□ 1.02
SYMPK-203ENST00000593899 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
SYMPK-203ENST00000593899 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
SYMPK-203ENST00000593899 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
SYMPK-203ENST00000593899 KIF27Q86VH2 1401 aa21.3■■□□□ 1
SYMPK-203ENST00000593899 NUP160Q12769 1436 aa21.29■■□□□ 1
SYMPK-203ENST00000593899 IGF1RP08069 1367 aa21.29■■□□□ 1
SYMPK-203ENST00000593899 CEP170Q5SW79 1584 aa21.26■□□□□ 0.99
SYMPK-203ENST00000593899 ERCC6L2Q5T890 1561 aa21.21■□□□□ 0.99
SYMPK-203ENST00000593899 CUL7Q14999 1698 aa21.17■□□□□ 0.98
SYMPK-203ENST00000593899 SHROOM2Q13796 1616 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms