RNA–Protein interactions for RNA: ENST00000593754.1

SARS2-204, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 4

Gene SARS2, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-204ENST00000593754 NISCHQ9Y2I1 1504 aa47.76■■■■■ 5.24
SARS2-204ENST00000593754 CCDC180Q9P1Z9 1646 aa42.62■■■■■ 4.41
SARS2-204ENST00000593754 ABCC9O60706 1549 aa41.63■■■■■ 4.25
SARS2-204ENST00000593754 RB1CC1Q8TDY2 1594 aa40.11■■■■■ 4.01
SARS2-204ENST00000593754 NACADO15069 1562 aa40.05■■■■■ 4
SARS2-204ENST00000593754 DCAF8L2P0C7V8 631 aa39.8■■■■□ 3.96
SARS2-204ENST00000593754 MYO15BQ96JP2 1530 aa39.8■■■■□ 3.96
SARS2-204ENST00000593754 ZCCHC6Q5VYS8 1495 aaKnown RBP39.79■■■■□ 3.96
SARS2-204ENST00000593754 DCAF1Q9Y4B6 1507 aa39.58■■■■□ 3.93
SARS2-204ENST00000593754 UNC13AQ9UPW8 1703 aa39.24■■■■□ 3.87
SARS2-204ENST00000593754 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
SARS2-204ENST00000593754 PABPN1Q86U42 306 aaKnown RBP eCLIP38.82■■■■□ 3.8
SARS2-204ENST00000593754 SCRIBQ14160 1630 aa38.76■■■■□ 3.8
SARS2-204ENST00000593754 SHROOM4Q9ULL8 1493 aa38.54■■■■□ 3.76
SARS2-204ENST00000593754 DNAJC5BQ9UF47 199 aa38.23■■■■□ 3.71
SARS2-204ENST00000593754 EIF4G1Q04637 1599 aaKnown RBP37.86■■■■□ 3.65
SARS2-204ENST00000593754 CC2D2AQ9P2K1 1620 aa37.73■■■■□ 3.63
SARS2-204ENST00000593754 CECR2Q9BXF3 1484 aa37.45■■■■□ 3.59
SARS2-204ENST00000593754 SMARCA4P51532 1647 aa37.12■■■■□ 3.53
SARS2-204ENST00000593754 BAZ1AQ9NRL2 1556 aaPredicted RBP37.06■■■■□ 3.52
SARS2-204ENST00000593754 NCAPD3P42695 1498 aa36.91■■■■□ 3.5
SARS2-204ENST00000593754 SMARCA2P51531 1590 aa36.9■■■■□ 3.5
SARS2-204ENST00000593754 ATAD2BQ9ULI0 1458 aa36.89■■■■□ 3.5
SARS2-204ENST00000593754 PEG3Q9GZU2 1588 aa36.79■■■■□ 3.48
SARS2-204ENST00000593754 MROH2BQ7Z745 1585 aa36.78■■■■□ 3.48
SARS2-204ENST00000593754 HMGXB3Q12766 1538 aa36.77■■■■□ 3.48
SARS2-204ENST00000593754 BAZ1BQ9UIG0 1483 aaKnown RBP36.6■■■■□ 3.45
SARS2-204ENST00000593754 WIZO95785 1651 aa36.41■■■■□ 3.42
SARS2-204ENST00000593754 RSF1Q96T23 1441 aaPredicted RBP36.31■■■■□ 3.4
SARS2-204ENST00000593754 TOP2AP11388 1531 aaKnown RBP36.03■■■■□ 3.36
SARS2-204ENST00000593754 LAMC3Q9Y6N6 1575 aa36.01■■■■□ 3.35
SARS2-204ENST00000593754 NESP48681 1621 aa36■■■■□ 3.35
SARS2-204ENST00000593754 ERCC6Q03468 1493 aa35.92■■■■□ 3.34
SARS2-204ENST00000593754 CADPSQ9ULU8 1353 aa35.8■■■■□ 3.32
SARS2-204ENST00000593754 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
SARS2-204ENST00000593754 KIF21AQ7Z4S6 1674 aa35.67■■■■□ 3.3
SARS2-204ENST00000593754 CUX2O14529 1486 aa35.64■■■■□ 3.3
SARS2-204ENST00000593754 CFTRP13569 1480 aa35.6■■■■□ 3.29
SARS2-204ENST00000593754 THOC2Q8NI27 1593 aaKnown RBP35.57■■■■□ 3.28
SARS2-204ENST00000593754 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
SARS2-204ENST00000593754 PRDM2Q13029 1718 aa35.45■■■■□ 3.27
SARS2-204ENST00000593754 FANCD2Q9BXW9 1451 aa35.4■■■■□ 3.26
SARS2-204ENST00000593754 CEP164Q9UPV0 1460 aa35.39■■■■□ 3.26
SARS2-204ENST00000593754 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
SARS2-204ENST00000593754 WDR62O43379 1518 aa35.28■■■■□ 3.24
SARS2-204ENST00000593754 SUPT5HO00267 1087 aaKnown RBP35.21■■■■□ 3.23
SARS2-204ENST00000593754 URB2Q14146 1524 aaKnown RBP35.04■■■■□ 3.2
SARS2-204ENST00000593754 ABCC8Q09428 1581 aa34.87■■■■□ 3.17
SARS2-204ENST00000593754 TOPBP1Q92547 1522 aa34.83■■■■□ 3.17
SARS2-204ENST00000593754 DNMBPQ6XZF7 1577 aa34.82■■■■□ 3.16
SARS2-204ENST00000593754 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
SARS2-204ENST00000593754 DNAJC5Q9H3Z4 198 aa34.57■■■■□ 3.12
SARS2-204ENST00000593754 POLA1P09884 1462 aaPredicted RBP34.52■■■■□ 3.12
SARS2-204ENST00000593754 CUX1P39880 1505 aa34.52■■■■□ 3.12
SARS2-204ENST00000593754 TARBP1Q13395 1621 aaKnown RBP34.5■■■■□ 3.11
SARS2-204ENST00000593754 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.1
SARS2-204ENST00000593754 FGD5Q6ZNL6 1462 aa34.42■■■■□ 3.1
SARS2-204ENST00000593754 EIF4G3O43432 1585 aaKnown RBP34.39■■■■□ 3.1
SARS2-204ENST00000593754 SOGA1O94964 1423 aa34.35■■■■□ 3.09
SARS2-204ENST00000593754 RAD54L2Q9Y4B4 1467 aa34.33■■■■□ 3.09
SARS2-204ENST00000593754 WDR97A6NE52 1622 aa34.3■■■■□ 3.08
SARS2-204ENST00000593754 BIVM-ERCC5R4GMW8 1640 aa34.27■■■■□ 3.08
SARS2-204ENST00000593754 WRNQ14191 1432 aaPredicted RBP eCLIP34.25■■■■□ 3.07
SARS2-204ENST00000593754 TOP2BQ02880 1626 aa34.25■■■■□ 3.07
SARS2-204ENST00000593754 AQRO60306 1485 aaKnown RBP eCLIP34.23■■■■□ 3.075e-9■□□□□ 10.4
SARS2-204ENST00000593754 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
SARS2-204ENST00000593754 TDRD9Q8NDG6 1382 aaKnown RBP34.13■■■■□ 3.05
SARS2-204ENST00000593754 ABCA10Q8WWZ4 1543 aa34.1■■■■□ 3.05
SARS2-204ENST00000593754 OSCARQ8IYS5 282 aa34.06■■■■□ 3.04
SARS2-204ENST00000593754 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.04
SARS2-204ENST00000593754 GRIN2BQ13224 1484 aa34■■■■□ 3.03
SARS2-204ENST00000593754 PBRM1Q86U86 1689 aa33.99■■■■□ 3.03
SARS2-204ENST00000593754 GAPVD1Q14C86 1478 aa33.99■■■■□ 3.03
SARS2-204ENST00000593754 CHD1O14646 1710 aa33.99■■■■□ 3.03
SARS2-204ENST00000593754 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.02
SARS2-204ENST00000593754 MAGI1Q96QZ7 1491 aaPredicted RBP33.95■■■■□ 3.02
SARS2-204ENST00000593754 FBLN2P98095 1184 aa33.8■■■■□ 3
SARS2-204ENST00000593754 SYNJ2O15056 1496 aa33.8■■■■□ 3
SARS2-204ENST00000593754 CHMP7Q8WUX9 453 aaPredicted RBP33.73■■■□□ 2.99
SARS2-204ENST00000593754 ERICH3Q5RHP9 1530 aa33.73■■■□□ 2.99
SARS2-204ENST00000593754 ADAMTS12P58397 1594 aa33.68■■■□□ 2.98
SARS2-204ENST00000593754 CLASP1Q7Z460 1538 aa33.59■■■□□ 2.97
SARS2-204ENST00000593754 RIMBP3CA6NJZ7 1639 aa33.59■■■□□ 2.97
SARS2-204ENST00000593754 RIMBP3BA6NNM3 1639 aa33.59■■■□□ 2.97
SARS2-204ENST00000593754 RIMBP3Q9UFD9 1639 aa33.59■■■□□ 2.97
SARS2-204ENST00000593754 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
SARS2-204ENST00000593754 GRIN2AQ12879 1464 aa33.57■■■□□ 2.97
SARS2-204ENST00000593754 KIF27Q86VH2 1401 aa33.56■■■□□ 2.96
SARS2-204ENST00000593754 ARHGEF11O15085 1522 aa33.56■■■□□ 2.96
SARS2-204ENST00000593754 CUL7Q14999 1698 aa33.43■■■□□ 2.94
SARS2-204ENST00000593754 NUP160Q12769 1436 aa33.43■■■□□ 2.94
SARS2-204ENST00000593754 CEP170Q5SW79 1584 aa33.41■■■□□ 2.94
SARS2-204ENST00000593754 IGF1RP08069 1367 aa33.39■■■□□ 2.94
SARS2-204ENST00000593754 TRIM41Q8WV44 630 aa33.35■■■□□ 2.93
SARS2-204ENST00000593754 ARAP1Q96P48 1450 aa33.25■■■□□ 2.91
SARS2-204ENST00000593754 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
SARS2-204ENST00000593754 RUSC2Q8N2Y8 1516 aa33.2■■■□□ 2.91
SARS2-204ENST00000593754 CARMIL1Q5VZK9 1371 aa33.2■■■□□ 2.9
SARS2-204ENST00000593754 CYB5RLQ6IPT4 315 aa33.16■■■□□ 2.9
SARS2-204ENST00000593754 KIAA0586Q9BVV6 1533 aa33.07■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms