RNA–Protein interactions for RNA: ENST00000593437.1

EMP3-202, Transcript of epithelial membrane protein 3, humanhuman

TSL 5

Gene EMP3, Length 502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-202ENST00000593437 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
EMP3-202ENST00000593437 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
EMP3-202ENST00000593437 ABCC9O60706 1549 aa22.26■■□□□ 1.15
EMP3-202ENST00000593437 DCAF8L2P0C7V8 631 aa21.49■■□□□ 1.03
EMP3-202ENST00000593437 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
EMP3-202ENST00000593437 NACADO15069 1562 aa21.4■■□□□ 1.02
EMP3-202ENST00000593437 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
EMP3-202ENST00000593437 MYO15BQ96JP2 1530 aa21.25■□□□□ 0.99
EMP3-202ENST00000593437 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
EMP3-202ENST00000593437 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
EMP3-202ENST00000593437 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
EMP3-202ENST00000593437 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
EMP3-202ENST00000593437 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
EMP3-202ENST00000593437 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
EMP3-202ENST00000593437 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
EMP3-202ENST00000593437 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
EMP3-202ENST00000593437 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
EMP3-202ENST00000593437 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
EMP3-202ENST00000593437 SMARCA4P51532 1647 aa19.89■□□□□ 0.77
EMP3-202ENST00000593437 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.77
EMP3-202ENST00000593437 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
EMP3-202ENST00000593437 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
EMP3-202ENST00000593437 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
EMP3-202ENST00000593437 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
EMP3-202ENST00000593437 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
EMP3-202ENST00000593437 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
EMP3-202ENST00000593437 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
EMP3-202ENST00000593437 WIZO95785 1651 aa19.57■□□□□ 0.72
EMP3-202ENST00000593437 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
EMP3-202ENST00000593437 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
EMP3-202ENST00000593437 NESP48681 1621 aa19.26■□□□□ 0.67
EMP3-202ENST00000593437 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
EMP3-202ENST00000593437 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
EMP3-202ENST00000593437 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
EMP3-202ENST00000593437 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
EMP3-202ENST00000593437 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
EMP3-202ENST00000593437 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
EMP3-202ENST00000593437 CFTRP13569 1480 aa19.06■□□□□ 0.64
EMP3-202ENST00000593437 KIF21AQ7Z4S6 1674 aa19.04■□□□□ 0.64
EMP3-202ENST00000593437 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
EMP3-202ENST00000593437 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
EMP3-202ENST00000593437 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
EMP3-202ENST00000593437 CUX2O14529 1486 aa18.93■□□□□ 0.62
EMP3-202ENST00000593437 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
EMP3-202ENST00000593437 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
EMP3-202ENST00000593437 WDR62O43379 1518 aa18.82■□□□□ 0.6
EMP3-202ENST00000593437 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
EMP3-202ENST00000593437 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
EMP3-202ENST00000593437 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
EMP3-202ENST00000593437 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
EMP3-202ENST00000593437 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
EMP3-202ENST00000593437 CUX1P39880 1505 aa18.54■□□□□ 0.56
EMP3-202ENST00000593437 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
EMP3-202ENST00000593437 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
EMP3-202ENST00000593437 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
EMP3-202ENST00000593437 SOGA1O94964 1423 aa18.46■□□□□ 0.55
EMP3-202ENST00000593437 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
EMP3-202ENST00000593437 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
EMP3-202ENST00000593437 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
EMP3-202ENST00000593437 SYNJ1O43426 1573 aa18.41■□□□□ 0.54
EMP3-202ENST00000593437 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
EMP3-202ENST00000593437 BIVM-ERCC5R4GMW8 1640 aa18.4■□□□□ 0.54
EMP3-202ENST00000593437 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
EMP3-202ENST00000593437 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.532e-7■■■■□ 23.4
EMP3-202ENST00000593437 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
EMP3-202ENST00000593437 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
EMP3-202ENST00000593437 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
EMP3-202ENST00000593437 DNAJC5Q9H3Z4 198 aa18.28■□□□□ 0.52
EMP3-202ENST00000593437 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
EMP3-202ENST00000593437 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
EMP3-202ENST00000593437 ABCA5Q8WWZ7 1642 aa18.22■□□□□ 0.51
EMP3-202ENST00000593437 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
EMP3-202ENST00000593437 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
EMP3-202ENST00000593437 FBLN2P98095 1184 aa18.19■□□□□ 0.5
EMP3-202ENST00000593437 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
EMP3-202ENST00000593437 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
EMP3-202ENST00000593437 CHD1O14646 1710 aa18.15■□□□□ 0.5
EMP3-202ENST00000593437 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
EMP3-202ENST00000593437 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
EMP3-202ENST00000593437 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
EMP3-202ENST00000593437 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
EMP3-202ENST00000593437 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.48
EMP3-202ENST00000593437 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
EMP3-202ENST00000593437 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
EMP3-202ENST00000593437 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
EMP3-202ENST00000593437 IGF1RP08069 1367 aa17.97■□□□□ 0.47
EMP3-202ENST00000593437 CUL7Q14999 1698 aa17.94■□□□□ 0.46
EMP3-202ENST00000593437 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
EMP3-202ENST00000593437 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
EMP3-202ENST00000593437 CHIC1Q5VXU3 224 aa17.9■□□□□ 0.46
EMP3-202ENST00000593437 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
EMP3-202ENST00000593437 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
EMP3-202ENST00000593437 NUP160Q12769 1436 aa17.89■□□□□ 0.45
EMP3-202ENST00000593437 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
EMP3-202ENST00000593437 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
EMP3-202ENST00000593437 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
EMP3-202ENST00000593437 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
EMP3-202ENST00000593437 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
EMP3-202ENST00000593437 EEA1Q15075 1411 aa17.77■□□□□ 0.44
EMP3-202ENST00000593437 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms