RNA–Protein interactions for RNA: ENST00000593043.1

GADD45B-207, Transcript of growth arrest and DNA damage inducible beta, humanhuman

TSL 1 (best)

Gene GADD45B, Length 373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45B-207ENST00000593043 NISCHQ9Y2I1 1504 aa50.48■■■■■ 5.67
GADD45B-207ENST00000593043 CCDC180Q9P1Z9 1646 aa45.16■■■■■ 4.82
GADD45B-207ENST00000593043 ABCC9O60706 1549 aa44.66■■■■■ 4.74
GADD45B-207ENST00000593043 RB1CC1Q8TDY2 1594 aa42.71■■■■■ 4.43
GADD45B-207ENST00000593043 NACADO15069 1562 aa42.52■■■■■ 4.4
GADD45B-207ENST00000593043 DCAF8L2P0C7V8 631 aa42.3■■■■■ 4.36
GADD45B-207ENST00000593043 MYO15BQ96JP2 1530 aa42.06■■■■■ 4.32
GADD45B-207ENST00000593043 UNC13AQ9UPW8 1703 aa41.95■■■■■ 4.31
GADD45B-207ENST00000593043 ZCCHC6Q5VYS8 1495 aaKnown RBP41.94■■■■■ 4.3
GADD45B-207ENST00000593043 DCAF1Q9Y4B6 1507 aa41.71■■■■■ 4.27
GADD45B-207ENST00000593043 PABPN1Q86U42 306 aaKnown RBP eCLIP41.61■■■■■ 4.25
GADD45B-207ENST00000593043 BICRAQ9NZM4 1560 aa41.53■■■■■ 4.24
GADD45B-207ENST00000593043 DNAJC5BQ9UF47 199 aa41.5■■■■■ 4.23
GADD45B-207ENST00000593043 SCRIBQ14160 1630 aa41.18■■■■■ 4.18
GADD45B-207ENST00000593043 SHROOM4Q9ULL8 1493 aa40.89■■■■■ 4.14
GADD45B-207ENST00000593043 EIF4G1Q04637 1599 aaKnown RBP40.42■■■■■ 4.06
GADD45B-207ENST00000593043 CC2D2AQ9P2K1 1620 aa40.42■■■■■ 4.06
GADD45B-207ENST00000593043 CECR2Q9BXF3 1484 aa40.16■■■■■ 4.02
GADD45B-207ENST00000593043 SMARCA4P51532 1647 aa39.32■■■■□ 3.89
GADD45B-207ENST00000593043 NCAPD3P42695 1498 aa39.22■■■■□ 3.87
GADD45B-207ENST00000593043 ATAD2BQ9ULI0 1458 aa39.19■■■■□ 3.86
GADD45B-207ENST00000593043 BAZ1AQ9NRL2 1556 aaPredicted RBP39.13■■■■□ 3.85
GADD45B-207ENST00000593043 SMARCA2P51531 1590 aa39.11■■■■□ 3.85
GADD45B-207ENST00000593043 HMGXB3Q12766 1538 aa39.01■■■■□ 3.84
GADD45B-207ENST00000593043 MROH2BQ7Z745 1585 aa38.93■■■■□ 3.82
GADD45B-207ENST00000593043 PEG3Q9GZU2 1588 aa38.92■■■■□ 3.82
GADD45B-207ENST00000593043 BAZ1BQ9UIG0 1483 aaKnown RBP38.82■■■■□ 3.81
GADD45B-207ENST00000593043 WIZO95785 1651 aa38.54■■■■□ 3.76
GADD45B-207ENST00000593043 NESP48681 1621 aa38.53■■■■□ 3.76
GADD45B-207ENST00000593043 ERCC6Q03468 1493 aa38.47■■■■□ 3.75
GADD45B-207ENST00000593043 LAMC3Q9Y6N6 1575 aa38.31■■■■□ 3.72
GADD45B-207ENST00000593043 CUX2O14529 1486 aa38.27■■■■□ 3.72
GADD45B-207ENST00000593043 RSF1Q96T23 1441 aaPredicted RBP38.24■■■■□ 3.71
GADD45B-207ENST00000593043 KIF21AQ7Z4S6 1674 aa38.14■■■■□ 3.7
GADD45B-207ENST00000593043 THOC2Q8NI27 1593 aaKnown RBP38.09■■■■□ 3.69
GADD45B-207ENST00000593043 CADPSQ9ULU8 1353 aa38.03■■■■□ 3.68
GADD45B-207ENST00000593043 TOP2AP11388 1531 aaKnown RBP38.02■■■■□ 3.68
GADD45B-207ENST00000593043 PDS5BQ9NTI5 1447 aa37.99■■■■□ 3.67
GADD45B-207ENST00000593043 CFTRP13569 1480 aa37.72■■■■□ 3.63
GADD45B-207ENST00000593043 DNAJC5Q9H3Z4 198 aa37.7■■■■□ 3.63
GADD45B-207ENST00000593043 MRC2Q9UBG0 1479 aa37.69■■■■□ 3.62
GADD45B-207ENST00000593043 FANCD2Q9BXW9 1451 aa37.64■■■■□ 3.62
GADD45B-207ENST00000593043 CEP164Q9UPV0 1460 aa37.63■■■■□ 3.61
GADD45B-207ENST00000593043 WDR62O43379 1518 aa37.61■■■■□ 3.61
GADD45B-207ENST00000593043 PRDM2Q13029 1718 aa37.57■■■■□ 3.6
GADD45B-207ENST00000593043 CCDC88BA6NC98 1476 aa37.57■■■■□ 3.6
GADD45B-207ENST00000593043 URB2Q14146 1524 aaKnown RBP37.34■■■■□ 3.57
GADD45B-207ENST00000593043 TOPBP1Q92547 1522 aa37■■■■□ 3.51
GADD45B-207ENST00000593043 SUPT5HO00267 1087 aaKnown RBP36.96■■■■□ 3.51
GADD45B-207ENST00000593043 DNMBPQ6XZF7 1577 aa36.91■■■■□ 3.5
GADD45B-207ENST00000593043 ABCC8Q09428 1581 aa36.88■■■■□ 3.49
GADD45B-207ENST00000593043 IFT140Q96RY7 1462 aa36.84■■■■□ 3.49
GADD45B-207ENST00000593043 ZNF608Q9ULD9 1512 aaPredicted RBP36.8■■■■□ 3.48
GADD45B-207ENST00000593043 TARBP1Q13395 1621 aaKnown RBP36.69■■■■□ 3.46
GADD45B-207ENST00000593043 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
GADD45B-207ENST00000593043 POLA1P09884 1462 aaPredicted RBP36.64■■■■□ 3.46
GADD45B-207ENST00000593043 CUX1P39880 1505 aa36.56■■■■□ 3.44
GADD45B-207ENST00000593043 OSCARQ8IYS5 282 aa36.53■■■■□ 3.44
GADD45B-207ENST00000593043 RAD54L2Q9Y4B4 1467 aa36.51■■■■□ 3.44
GADD45B-207ENST00000593043 AQRO60306 1485 aaKnown RBP eCLIP36.49■■■■□ 3.435e-9■■■■■ 27.9
GADD45B-207ENST00000593043 FGD5Q6ZNL6 1462 aa36.48■■■■□ 3.43
GADD45B-207ENST00000593043 SOGA1O94964 1423 aa36.44■■■■□ 3.42
GADD45B-207ENST00000593043 CHD1O14646 1710 aa36.37■■■■□ 3.41
GADD45B-207ENST00000593043 TDRD9Q8NDG6 1382 aaKnown RBP36.32■■■■□ 3.4
GADD45B-207ENST00000593043 WDR97A6NE52 1622 aa36.31■■■■□ 3.4
GADD45B-207ENST00000593043 TRIM41Q8WV44 630 aa36.24■■■■□ 3.39
GADD45B-207ENST00000593043 RIMBP3CA6NJZ7 1639 aa36.16■■■■□ 3.38
GADD45B-207ENST00000593043 RIMBP3BA6NNM3 1639 aa36.16■■■■□ 3.38
GADD45B-207ENST00000593043 RIMBP3Q9UFD9 1639 aa36.16■■■■□ 3.38
GADD45B-207ENST00000593043 SNAPC4Q5SXM2 1469 aa36.15■■■■□ 3.38
GADD45B-207ENST00000593043 BIVM-ERCC5R4GMW8 1640 aa36.13■■■■□ 3.37
GADD45B-207ENST00000593043 PBRM1Q86U86 1689 aa36.12■■■■□ 3.37
GADD45B-207ENST00000593043 TOP2BQ02880 1626 aa36.09■■■■□ 3.37
GADD45B-207ENST00000593043 FBLN2P98095 1184 aa36.09■■■■□ 3.37
GADD45B-207ENST00000593043 SYNJ1O43426 1573 aa36.09■■■■□ 3.37
GADD45B-207ENST00000593043 ABCA10Q8WWZ4 1543 aa36.08■■■■□ 3.37
GADD45B-207ENST00000593043 GRIN2BQ13224 1484 aa36.08■■■■□ 3.37
GADD45B-207ENST00000593043 ABCA5Q8WWZ7 1642 aa36.05■■■■□ 3.36
GADD45B-207ENST00000593043 ARHGEF11O15085 1522 aa36.05■■■■□ 3.36
GADD45B-207ENST00000593043 MAGI1Q96QZ7 1491 aaPredicted RBP36.05■■■■□ 3.36
GADD45B-207ENST00000593043 WRNQ14191 1432 aaPredicted RBP eCLIP36.04■■■■□ 3.36
GADD45B-207ENST00000593043 GAPVD1Q14C86 1478 aa36.03■■■■□ 3.36
GADD45B-207ENST00000593043 SYNJ2O15056 1496 aa35.92■■■■□ 3.34
GADD45B-207ENST00000593043 CHMP7Q8WUX9 453 aaPredicted RBP35.88■■■■□ 3.33
GADD45B-207ENST00000593043 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
GADD45B-207ENST00000593043 ARAP1Q96P48 1450 aa35.73■■■■□ 3.31
GADD45B-207ENST00000593043 ADAMTS12P58397 1594 aa35.73■■■■□ 3.31
GADD45B-207ENST00000593043 CYB5RLQ6IPT4 315 aa35.68■■■■□ 3.3
GADD45B-207ENST00000593043 GRIN2AQ12879 1464 aa35.64■■■■□ 3.3
GADD45B-207ENST00000593043 ERICH3Q5RHP9 1530 aa35.63■■■■□ 3.29
GADD45B-207ENST00000593043 FHAD1B1AJZ9 1412 aa35.57■■■■□ 3.28
GADD45B-207ENST00000593043 CEP170Q5SW79 1584 aa35.55■■■■□ 3.28
GADD45B-207ENST00000593043 NUP160Q12769 1436 aa35.5■■■■□ 3.27
GADD45B-207ENST00000593043 ERCC6L2Q5T890 1561 aa35.39■■■■□ 3.26
GADD45B-207ENST00000593043 SHROOM2Q13796 1616 aa35.36■■■■□ 3.25
GADD45B-207ENST00000593043 KIF27Q86VH2 1401 aa35.31■■■■□ 3.24
GADD45B-207ENST00000593043 IGF1RP08069 1367 aa35.26■■■■□ 3.24
GADD45B-207ENST00000593043 CUL7Q14999 1698 aa35.25■■■■□ 3.23
GADD45B-207ENST00000593043 RUSC2Q8N2Y8 1516 aa35.22■■■■□ 3.23
GADD45B-207ENST00000593043 PRG4Q92954 1404 aaPredicted RBP35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms