RNA–Protein interactions for RNA: ENST00000592786.5

PDCD5-208, Transcript of programmed cell death 5, humanhuman

TSL 3 BASIC

Gene PDCD5, Length 468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-208ENST00000592786 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
PDCD5-208ENST00000592786 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
PDCD5-208ENST00000592786 ABCC9O60706 1549 aa30.15■■■□□ 2.42
PDCD5-208ENST00000592786 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
PDCD5-208ENST00000592786 NACADO15069 1562 aa28.83■■■□□ 2.21
PDCD5-208ENST00000592786 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
PDCD5-208ENST00000592786 MYO15BQ96JP2 1530 aa28.56■■■□□ 2.16
PDCD5-208ENST00000592786 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
PDCD5-208ENST00000592786 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
PDCD5-208ENST00000592786 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
PDCD5-208ENST00000592786 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
PDCD5-208ENST00000592786 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
PDCD5-208ENST00000592786 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.06
PDCD5-208ENST00000592786 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
PDCD5-208ENST00000592786 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
PDCD5-208ENST00000592786 EIF4G1Q04637 1599 aaKnown RBP27.32■■□□□ 1.96
PDCD5-208ENST00000592786 CC2D2AQ9P2K1 1620 aa27.29■■□□□ 1.96
PDCD5-208ENST00000592786 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
PDCD5-208ENST00000592786 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
PDCD5-208ENST00000592786 NCAPD3P42695 1498 aa26.56■■□□□ 1.84
PDCD5-208ENST00000592786 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
PDCD5-208ENST00000592786 SMARCA2P51531 1590 aa26.53■■□□□ 1.84
PDCD5-208ENST00000592786 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
PDCD5-208ENST00000592786 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
PDCD5-208ENST00000592786 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
PDCD5-208ENST00000592786 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
PDCD5-208ENST00000592786 MROH2BQ7Z745 1585 aa26.27■■□□□ 1.8
PDCD5-208ENST00000592786 ERCC6Q03468 1493 aa26.1■■□□□ 1.77
PDCD5-208ENST00000592786 WIZO95785 1651 aa25.98■■□□□ 1.75
PDCD5-208ENST00000592786 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
PDCD5-208ENST00000592786 NESP48681 1621 aa25.96■■□□□ 1.75
PDCD5-208ENST00000592786 CUX2O14529 1486 aa25.95■■□□□ 1.74
PDCD5-208ENST00000592786 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
PDCD5-208ENST00000592786 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
PDCD5-208ENST00000592786 CADPSQ9ULU8 1353 aa25.76■■□□□ 1.71
PDCD5-208ENST00000592786 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
PDCD5-208ENST00000592786 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
PDCD5-208ENST00000592786 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
PDCD5-208ENST00000592786 CFTRP13569 1480 aa25.54■■□□□ 1.68
PDCD5-208ENST00000592786 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
PDCD5-208ENST00000592786 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
PDCD5-208ENST00000592786 DNAJC5Q9H3Z4 198 aa25.5■■□□□ 1.67
PDCD5-208ENST00000592786 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
PDCD5-208ENST00000592786 WDR62O43379 1518 aa25.45■■□□□ 1.66
PDCD5-208ENST00000592786 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
PDCD5-208ENST00000592786 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
PDCD5-208ENST00000592786 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
PDCD5-208ENST00000592786 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
PDCD5-208ENST00000592786 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
PDCD5-208ENST00000592786 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
PDCD5-208ENST00000592786 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
PDCD5-208ENST00000592786 SUPT5HO00267 1087 aaKnown RBP24.93■■□□□ 1.58
PDCD5-208ENST00000592786 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
PDCD5-208ENST00000592786 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
PDCD5-208ENST00000592786 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
PDCD5-208ENST00000592786 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
PDCD5-208ENST00000592786 TARBP1Q13395 1621 aaKnown RBP24.77■■□□□ 1.56
PDCD5-208ENST00000592786 SOGA1O94964 1423 aa24.69■■□□□ 1.54
PDCD5-208ENST00000592786 CUX1P39880 1505 aa24.67■■□□□ 1.54
PDCD5-208ENST00000592786 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
PDCD5-208ENST00000592786 WDR97A6NE52 1622 aa24.66■■□□□ 1.54
PDCD5-208ENST00000592786 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.532e-9■■■■■ 26.8
PDCD5-208ENST00000592786 RAD54L2Q9Y4B4 1467 aa24.63■■□□□ 1.53
PDCD5-208ENST00000592786 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
PDCD5-208ENST00000592786 CHD1O14646 1710 aa24.52■■□□□ 1.52
PDCD5-208ENST00000592786 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
PDCD5-208ENST00000592786 GRIN2BQ13224 1484 aa24.46■■□□□ 1.51
PDCD5-208ENST00000592786 FBLN2P98095 1184 aa24.46■■□□□ 1.51
PDCD5-208ENST00000592786 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
PDCD5-208ENST00000592786 SNAPC4Q5SXM2 1469 aa24.44■■□□□ 1.5
PDCD5-208ENST00000592786 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
PDCD5-208ENST00000592786 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
PDCD5-208ENST00000592786 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
PDCD5-208ENST00000592786 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
PDCD5-208ENST00000592786 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
PDCD5-208ENST00000592786 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
PDCD5-208ENST00000592786 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
PDCD5-208ENST00000592786 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
PDCD5-208ENST00000592786 PBRM1Q86U86 1689 aa24.39■■□□□ 1.49
PDCD5-208ENST00000592786 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
PDCD5-208ENST00000592786 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
PDCD5-208ENST00000592786 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
PDCD5-208ENST00000592786 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
PDCD5-208ENST00000592786 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
PDCD5-208ENST00000592786 CLASP1Q7Z460 1538 aa24.23■■□□□ 1.47
PDCD5-208ENST00000592786 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
PDCD5-208ENST00000592786 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
PDCD5-208ENST00000592786 CYB5RLQ6IPT4 315 aa24.15■■□□□ 1.46
PDCD5-208ENST00000592786 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
PDCD5-208ENST00000592786 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
PDCD5-208ENST00000592786 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
PDCD5-208ENST00000592786 NUP160Q12769 1436 aa24.02■■□□□ 1.44
PDCD5-208ENST00000592786 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
PDCD5-208ENST00000592786 KIF27Q86VH2 1401 aa23.98■■□□□ 1.43
PDCD5-208ENST00000592786 CUL7Q14999 1698 aa23.9■■□□□ 1.42
PDCD5-208ENST00000592786 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
PDCD5-208ENST00000592786 IGF1RP08069 1367 aa23.84■■□□□ 1.41
PDCD5-208ENST00000592786 TRHP20396 242 aaPredicted RBP23.82■■□□□ 1.4
PDCD5-208ENST00000592786 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
PDCD5-208ENST00000592786 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms