RNA–Protein interactions for RNA: ENST00000592774.1

SEC11C-207, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11C, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-207ENST00000592774 NISCHQ9Y2I1 1504 aa41.58■■■■■ 4.25
SEC11C-207ENST00000592774 CCDC180Q9P1Z9 1646 aa37.15■■■■□ 3.54
SEC11C-207ENST00000592774 ABCC9O60706 1549 aa36.75■■■■□ 3.47
SEC11C-207ENST00000592774 RB1CC1Q8TDY2 1594 aa35.13■■■■□ 3.21
SEC11C-207ENST00000592774 NACADO15069 1562 aa34.98■■■■□ 3.19
SEC11C-207ENST00000592774 DCAF8L2P0C7V8 631 aa34.9■■■■□ 3.18
SEC11C-207ENST00000592774 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
SEC11C-207ENST00000592774 ZCCHC6Q5VYS8 1495 aaKnown RBP34.55■■■■□ 3.12
SEC11C-207ENST00000592774 UNC13AQ9UPW8 1703 aa34.47■■■■□ 3.11
SEC11C-207ENST00000592774 DCAF1Q9Y4B6 1507 aa34.33■■■■□ 3.09
SEC11C-207ENST00000592774 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.08
SEC11C-207ENST00000592774 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
SEC11C-207ENST00000592774 DNAJC5BQ9UF47 199 aa34.07■■■■□ 3.04
SEC11C-207ENST00000592774 SCRIBQ14160 1630 aa33.91■■■■□ 3.02
SEC11C-207ENST00000592774 SHROOM4Q9ULL8 1493 aa33.62■■■□□ 2.97
SEC11C-207ENST00000592774 EIF4G1Q04637 1599 aaKnown RBP33.25■■■□□ 2.91
SEC11C-207ENST00000592774 CC2D2AQ9P2K1 1620 aa33.22■■■□□ 2.91
SEC11C-207ENST00000592774 CECR2Q9BXF3 1484 aa33.02■■■□□ 2.88
SEC11C-207ENST00000592774 SMARCA4P51532 1647 aa32.38■■■□□ 2.77
SEC11C-207ENST00000592774 NCAPD3P42695 1498 aa32.27■■■□□ 2.76
SEC11C-207ENST00000592774 ATAD2BQ9ULI0 1458 aa32.26■■■□□ 2.75
SEC11C-207ENST00000592774 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
SEC11C-207ENST00000592774 SMARCA2P51531 1590 aa32.18■■■□□ 2.74
SEC11C-207ENST00000592774 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
SEC11C-207ENST00000592774 MROH2BQ7Z745 1585 aa32.07■■■□□ 2.72
SEC11C-207ENST00000592774 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
SEC11C-207ENST00000592774 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
SEC11C-207ENST00000592774 WIZO95785 1651 aa31.74■■■□□ 2.67
SEC11C-207ENST00000592774 NESP48681 1621 aa31.71■■■□□ 2.67
SEC11C-207ENST00000592774 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
SEC11C-207ENST00000592774 RSF1Q96T23 1441 aaPredicted RBP31.53■■■□□ 2.64
SEC11C-207ENST00000592774 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.63
SEC11C-207ENST00000592774 CUX2O14529 1486 aa31.43■■■□□ 2.62
SEC11C-207ENST00000592774 KIF21AQ7Z4S6 1674 aa31.35■■■□□ 2.61
SEC11C-207ENST00000592774 TOP2AP11388 1531 aaKnown RBP31.32■■■□□ 2.6
SEC11C-207ENST00000592774 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
SEC11C-207ENST00000592774 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
SEC11C-207ENST00000592774 PDS5BQ9NTI5 1447 aa31.26■■■□□ 2.6
SEC11C-207ENST00000592774 CFTRP13569 1480 aa31.06■■■□□ 2.56
SEC11C-207ENST00000592774 MRC2Q9UBG0 1479 aa31.01■■■□□ 2.56
SEC11C-207ENST00000592774 FANCD2Q9BXW9 1451 aa30.98■■■□□ 2.55
SEC11C-207ENST00000592774 CEP164Q9UPV0 1460 aa30.97■■■□□ 2.55
SEC11C-207ENST00000592774 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.55
SEC11C-207ENST00000592774 WDR62O43379 1518 aa30.93■■■□□ 2.54
SEC11C-207ENST00000592774 DNAJC5Q9H3Z4 198 aa30.92■■■□□ 2.54
SEC11C-207ENST00000592774 PRDM2Q13029 1718 aa30.88■■■□□ 2.53
SEC11C-207ENST00000592774 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
SEC11C-207ENST00000592774 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
SEC11C-207ENST00000592774 TOPBP1Q92547 1522 aa30.45■■■□□ 2.47
SEC11C-207ENST00000592774 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
SEC11C-207ENST00000592774 ABCC8Q09428 1581 aa30.36■■■□□ 2.45
SEC11C-207ENST00000592774 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
SEC11C-207ENST00000592774 ZNF608Q9ULD9 1512 aaPredicted RBP30.28■■■□□ 2.44
SEC11C-207ENST00000592774 TARBP1Q13395 1621 aaKnown RBP30.19■■■□□ 2.42
SEC11C-207ENST00000592774 POLA1P09884 1462 aaPredicted RBP30.18■■■□□ 2.42
SEC11C-207ENST00000592774 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
SEC11C-207ENST00000592774 CUX1P39880 1505 aa30.11■■■□□ 2.41
SEC11C-207ENST00000592774 RAD54L2Q9Y4B4 1467 aa30.06■■■□□ 2.4
SEC11C-207ENST00000592774 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
SEC11C-207ENST00000592774 AQRO60306 1485 aaKnown RBP eCLIP30.05■■■□□ 2.4
SEC11C-207ENST00000592774 OSCARQ8IYS5 282 aa30.04■■■□□ 2.4
SEC11C-207ENST00000592774 SOGA1O94964 1423 aa30.01■■■□□ 2.39
SEC11C-207ENST00000592774 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
SEC11C-207ENST00000592774 CHD1O14646 1710 aa29.89■■■□□ 2.38
SEC11C-207ENST00000592774 WDR97A6NE52 1622 aa29.87■■■□□ 2.37
SEC11C-207ENST00000592774 TRIM41Q8WV44 630 aa29.79■■■□□ 2.36
SEC11C-207ENST00000592774 SNAPC4Q5SXM2 1469 aa29.75■■■□□ 2.35
SEC11C-207ENST00000592774 BIVM-ERCC5R4GMW8 1640 aa29.75■■■□□ 2.35
SEC11C-207ENST00000592774 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
SEC11C-207ENST00000592774 FBLN2P98095 1184 aa29.73■■■□□ 2.35
SEC11C-207ENST00000592774 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
SEC11C-207ENST00000592774 WRNQ14191 1432 aaPredicted RBP eCLIP29.72■■■□□ 2.35
SEC11C-207ENST00000592774 PBRM1Q86U86 1689 aa29.71■■■□□ 2.35
SEC11C-207ENST00000592774 RIMBP3CA6NJZ7 1639 aa29.71■■■□□ 2.35
SEC11C-207ENST00000592774 RIMBP3BA6NNM3 1639 aa29.71■■■□□ 2.35
SEC11C-207ENST00000592774 RIMBP3Q9UFD9 1639 aa29.71■■■□□ 2.35
SEC11C-207ENST00000592774 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
SEC11C-207ENST00000592774 GRIN2BQ13224 1484 aa29.7■■■□□ 2.35
SEC11C-207ENST00000592774 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
SEC11C-207ENST00000592774 GAPVD1Q14C86 1478 aa29.67■■■□□ 2.34
SEC11C-207ENST00000592774 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
SEC11C-207ENST00000592774 ARHGEF11O15085 1522 aa29.63■■■□□ 2.33
SEC11C-207ENST00000592774 SYNJ2O15056 1496 aa29.56■■■□□ 2.32
SEC11C-207ENST00000592774 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
SEC11C-207ENST00000592774 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
SEC11C-207ENST00000592774 ADAMTS12P58397 1594 aa29.42■■■□□ 2.3
SEC11C-207ENST00000592774 ARAP1Q96P48 1450 aa29.37■■■□□ 2.29
SEC11C-207ENST00000592774 CYB5RLQ6IPT4 315 aa29.35■■■□□ 2.29
SEC11C-207ENST00000592774 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
SEC11C-207ENST00000592774 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
SEC11C-207ENST00000592774 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
SEC11C-207ENST00000592774 CEP170Q5SW79 1584 aa29.26■■■□□ 2.28
SEC11C-207ENST00000592774 NUP160Q12769 1436 aa29.21■■■□□ 2.27
SEC11C-207ENST00000592774 ERCC6L2Q5T890 1561 aa29.12■■■□□ 2.25
SEC11C-207ENST00000592774 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
SEC11C-207ENST00000592774 SHROOM2Q13796 1616 aa29.08■■■□□ 2.25
SEC11C-207ENST00000592774 IGF1RP08069 1367 aa29.05■■■□□ 2.24
SEC11C-207ENST00000592774 CUL7Q14999 1698 aa29.03■■■□□ 2.24
SEC11C-207ENST00000592774 RUSC2Q8N2Y8 1516 aa29■■■□□ 2.23
SEC11C-207ENST00000592774 PRG4Q92954 1404 aaPredicted RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms