RNA–Protein interactions for RNA: ENST00000592707.5

SAFB-214, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 940 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-214ENST00000592707 NISCHQ9Y2I1 1504 aa34.7■■■■□ 3.14
SAFB-214ENST00000592707 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
SAFB-214ENST00000592707 ABCC9O60706 1549 aa30.86■■■□□ 2.53
SAFB-214ENST00000592707 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
SAFB-214ENST00000592707 NACADO15069 1562 aa29.26■■■□□ 2.28
SAFB-214ENST00000592707 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
SAFB-214ENST00000592707 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
SAFB-214ENST00000592707 DNAJC5BQ9UF47 199 aa28.9■■■□□ 2.22
SAFB-214ENST00000592707 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
SAFB-214ENST00000592707 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
SAFB-214ENST00000592707 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
SAFB-214ENST00000592707 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
SAFB-214ENST00000592707 BICRAQ9NZM4 1560 aa28.66■■■□□ 2.18
SAFB-214ENST00000592707 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
SAFB-214ENST00000592707 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
SAFB-214ENST00000592707 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.05
SAFB-214ENST00000592707 EIF4G1Q04637 1599 aaKnown RBP27.87■■■□□ 2.05
SAFB-214ENST00000592707 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
SAFB-214ENST00000592707 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
SAFB-214ENST00000592707 SMARCA4P51532 1647 aa27.01■■□□□ 1.92
SAFB-214ENST00000592707 ATAD2BQ9ULI0 1458 aa27.01■■□□□ 1.91
SAFB-214ENST00000592707 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
SAFB-214ENST00000592707 BAZ1AQ9NRL2 1556 aaPredicted RBP26.87■■□□□ 1.89
SAFB-214ENST00000592707 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
SAFB-214ENST00000592707 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
SAFB-214ENST00000592707 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
SAFB-214ENST00000592707 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.87
SAFB-214ENST00000592707 NESP48681 1621 aa26.6■■□□□ 1.85
SAFB-214ENST00000592707 ERCC6Q03468 1493 aa26.54■■□□□ 1.84
SAFB-214ENST00000592707 CUX2O14529 1486 aa26.48■■□□□ 1.83
SAFB-214ENST00000592707 WIZO95785 1651 aa26.42■■□□□ 1.82
SAFB-214ENST00000592707 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
SAFB-214ENST00000592707 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
SAFB-214ENST00000592707 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
SAFB-214ENST00000592707 THOC2Q8NI27 1593 aaKnown RBP26.28■■□□□ 1.8
SAFB-214ENST00000592707 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
SAFB-214ENST00000592707 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
SAFB-214ENST00000592707 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
SAFB-214ENST00000592707 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
SAFB-214ENST00000592707 CFTRP13569 1480 aa25.99■■□□□ 1.75
SAFB-214ENST00000592707 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
SAFB-214ENST00000592707 WDR62O43379 1518 aa25.95■■□□□ 1.74
SAFB-214ENST00000592707 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
SAFB-214ENST00000592707 CEP164Q9UPV0 1460 aa25.9■■□□□ 1.74
SAFB-214ENST00000592707 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
SAFB-214ENST00000592707 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
SAFB-214ENST00000592707 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
SAFB-214ENST00000592707 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
SAFB-214ENST00000592707 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
SAFB-214ENST00000592707 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
SAFB-214ENST00000592707 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
SAFB-214ENST00000592707 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
SAFB-214ENST00000592707 OSCARQ8IYS5 282 aa25.28■■□□□ 1.64
SAFB-214ENST00000592707 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
SAFB-214ENST00000592707 POLA1P09884 1462 aaPredicted RBP25.23■■□□□ 1.63
SAFB-214ENST00000592707 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
SAFB-214ENST00000592707 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.621e-9■■■■□ 25.2
SAFB-214ENST00000592707 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
SAFB-214ENST00000592707 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
SAFB-214ENST00000592707 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
SAFB-214ENST00000592707 CUX1P39880 1505 aa25.12■■□□□ 1.61
SAFB-214ENST00000592707 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
SAFB-214ENST00000592707 SOGA1O94964 1423 aa25.08■■□□□ 1.61
SAFB-214ENST00000592707 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
SAFB-214ENST00000592707 CHD1O14646 1710 aa24.98■■□□□ 1.59
SAFB-214ENST00000592707 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
SAFB-214ENST00000592707 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
SAFB-214ENST00000592707 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
SAFB-214ENST00000592707 ARHGEF11O15085 1522 aa24.92■■□□□ 1.58
SAFB-214ENST00000592707 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
SAFB-214ENST00000592707 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.58
SAFB-214ENST00000592707 FBLN2P98095 1184 aa24.87■■□□□ 1.57
SAFB-214ENST00000592707 GRIN2BQ13224 1484 aa24.83■■□□□ 1.57
SAFB-214ENST00000592707 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
SAFB-214ENST00000592707 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
SAFB-214ENST00000592707 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
SAFB-214ENST00000592707 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
SAFB-214ENST00000592707 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
SAFB-214ENST00000592707 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
SAFB-214ENST00000592707 SYNJ2O15056 1496 aa24.74■■□□□ 1.55
SAFB-214ENST00000592707 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
SAFB-214ENST00000592707 TOP2BQ02880 1626 aa24.73■■□□□ 1.55
SAFB-214ENST00000592707 BIVM-ERCC5R4GMW8 1640 aa24.73■■□□□ 1.55
SAFB-214ENST00000592707 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
SAFB-214ENST00000592707 ARAP1Q96P48 1450 aa24.72■■□□□ 1.55
SAFB-214ENST00000592707 WRNQ14191 1432 aaPredicted RBP eCLIP24.72■■□□□ 1.55
SAFB-214ENST00000592707 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.54
SAFB-214ENST00000592707 ADAMTS12P58397 1594 aa24.55■■□□□ 1.52
SAFB-214ENST00000592707 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
SAFB-214ENST00000592707 NUP160Q12769 1436 aa24.48■■□□□ 1.51
SAFB-214ENST00000592707 ERICH3Q5RHP9 1530 aa24.48■■□□□ 1.51
SAFB-214ENST00000592707 CEP170Q5SW79 1584 aa24.47■■□□□ 1.51
SAFB-214ENST00000592707 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
SAFB-214ENST00000592707 ERCC6L2Q5T890 1561 aa24.42■■□□□ 1.5
SAFB-214ENST00000592707 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
SAFB-214ENST00000592707 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
SAFB-214ENST00000592707 IGF1RP08069 1367 aa24.27■■□□□ 1.48
SAFB-214ENST00000592707 KIF27Q86VH2 1401 aa24.22■■□□□ 1.47
SAFB-214ENST00000592707 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
SAFB-214ENST00000592707 PRG4Q92954 1404 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms