RNA–Protein interactions for RNA: ENST00000592601.5

NEDD4L-235, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-235ENST00000592601 NISCHQ9Y2I1 1504 aa32.22■■■□□ 2.75
NEDD4L-235ENST00000592601 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
NEDD4L-235ENST00000592601 ZCCHC6Q5VYS8 1495 aaKnown RBP27.05■■□□□ 1.92
NEDD4L-235ENST00000592601 ABCC9O60706 1549 aa26.78■■□□□ 1.88
NEDD4L-235ENST00000592601 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
NEDD4L-235ENST00000592601 MYO15BQ96JP2 1530 aa26.52■■□□□ 1.84
NEDD4L-235ENST00000592601 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
NEDD4L-235ENST00000592601 NACADO15069 1562 aa26.37■■□□□ 1.81
NEDD4L-235ENST00000592601 RB1CC1Q8TDY2 1594 aa26.18■■□□□ 1.78
NEDD4L-235ENST00000592601 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
NEDD4L-235ENST00000592601 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
NEDD4L-235ENST00000592601 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
NEDD4L-235ENST00000592601 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
NEDD4L-235ENST00000592601 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.62
NEDD4L-235ENST00000592601 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
NEDD4L-235ENST00000592601 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
NEDD4L-235ENST00000592601 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
NEDD4L-235ENST00000592601 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
NEDD4L-235ENST00000592601 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
NEDD4L-235ENST00000592601 SMARCA4P51532 1647 aa24.83■■□□□ 1.56
NEDD4L-235ENST00000592601 WIZO95785 1651 aa24.62■■□□□ 1.53
NEDD4L-235ENST00000592601 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
NEDD4L-235ENST00000592601 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
NEDD4L-235ENST00000592601 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
NEDD4L-235ENST00000592601 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.51
NEDD4L-235ENST00000592601 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
NEDD4L-235ENST00000592601 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
NEDD4L-235ENST00000592601 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
NEDD4L-235ENST00000592601 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
NEDD4L-235ENST00000592601 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
NEDD4L-235ENST00000592601 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
NEDD4L-235ENST00000592601 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
NEDD4L-235ENST00000592601 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
NEDD4L-235ENST00000592601 CFTRP13569 1480 aa23.69■■□□□ 1.38
NEDD4L-235ENST00000592601 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
NEDD4L-235ENST00000592601 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
NEDD4L-235ENST00000592601 LAMC3Q9Y6N6 1575 aa23.54■■□□□ 1.36
NEDD4L-235ENST00000592601 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
NEDD4L-235ENST00000592601 NESP48681 1621 aa23.44■■□□□ 1.34
NEDD4L-235ENST00000592601 TRIM41Q8WV44 630 aa23.43■■□□□ 1.34
NEDD4L-235ENST00000592601 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
NEDD4L-235ENST00000592601 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
NEDD4L-235ENST00000592601 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
NEDD4L-235ENST00000592601 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.32
NEDD4L-235ENST00000592601 BIVM-ERCC5R4GMW8 1640 aa23.31■■□□□ 1.32
NEDD4L-235ENST00000592601 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
NEDD4L-235ENST00000592601 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
NEDD4L-235ENST00000592601 CUX1P39880 1505 aa23.26■■□□□ 1.31
NEDD4L-235ENST00000592601 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
NEDD4L-235ENST00000592601 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
NEDD4L-235ENST00000592601 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
NEDD4L-235ENST00000592601 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
NEDD4L-235ENST00000592601 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
NEDD4L-235ENST00000592601 EEA1Q15075 1411 aa23.05■■□□□ 1.28
NEDD4L-235ENST00000592601 FGD5Q6ZNL6 1462 aa23.04■■□□□ 1.28
NEDD4L-235ENST00000592601 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
NEDD4L-235ENST00000592601 SOGA1O94964 1423 aa23■■□□□ 1.27
NEDD4L-235ENST00000592601 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
NEDD4L-235ENST00000592601 WDR62O43379 1518 aa22.96■■□□□ 1.27
NEDD4L-235ENST00000592601 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
NEDD4L-235ENST00000592601 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
NEDD4L-235ENST00000592601 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
NEDD4L-235ENST00000592601 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
NEDD4L-235ENST00000592601 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
NEDD4L-235ENST00000592601 WDR97A6NE52 1622 aa22.84■■□□□ 1.25
NEDD4L-235ENST00000592601 CUX2O14529 1486 aa22.84■■□□□ 1.25
NEDD4L-235ENST00000592601 RAD54L2Q9Y4B4 1467 aa22.84■■□□□ 1.25
NEDD4L-235ENST00000592601 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.25
NEDD4L-235ENST00000592601 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
NEDD4L-235ENST00000592601 KIF21BO75037 1637 aa22.75■■□□□ 1.23
NEDD4L-235ENST00000592601 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
NEDD4L-235ENST00000592601 LOC105371045A0A1W2PR82 267 aa22.73■■□□□ 1.23
NEDD4L-235ENST00000592601 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
NEDD4L-235ENST00000592601 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
NEDD4L-235ENST00000592601 PRXQ9BXM0 1461 aa22.67■■□□□ 1.22
NEDD4L-235ENST00000592601 IGF1RP08069 1367 aa22.65■■□□□ 1.22
NEDD4L-235ENST00000592601 ERICH3Q5RHP9 1530 aa22.64■■□□□ 1.21
NEDD4L-235ENST00000592601 GAPVD1Q14C86 1478 aa22.63■■□□□ 1.21
NEDD4L-235ENST00000592601 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
NEDD4L-235ENST00000592601 CUL7Q14999 1698 aa22.59■■□□□ 1.21
NEDD4L-235ENST00000592601 RAPGEF2Q9Y4G8 1499 aa22.58■■□□□ 1.2
NEDD4L-235ENST00000592601 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
NEDD4L-235ENST00000592601 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
NEDD4L-235ENST00000592601 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
NEDD4L-235ENST00000592601 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
NEDD4L-235ENST00000592601 EHMT2Q96KQ7 1210 aa22.53■■□□□ 1.2
NEDD4L-235ENST00000592601 EIF4G3O43432 1585 aaKnown RBP22.53■■□□□ 1.2
NEDD4L-235ENST00000592601 AQRO60306 1485 aaKnown RBP eCLIP22.52■■□□□ 1.2
NEDD4L-235ENST00000592601 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
NEDD4L-235ENST00000592601 UBTFP17480 764 aaKnown RBP22.46■■□□□ 1.19
NEDD4L-235ENST00000592601 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
NEDD4L-235ENST00000592601 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
NEDD4L-235ENST00000592601 CEP162Q5TB80 1403 aa22.38■■□□□ 1.17
NEDD4L-235ENST00000592601 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
NEDD4L-235ENST00000592601 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
NEDD4L-235ENST00000592601 CTTNBP2Q8WZ74 1663 aa22.29■■□□□ 1.16
NEDD4L-235ENST00000592601 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
NEDD4L-235ENST00000592601 CLIP1P30622 1438 aa22.26■■□□□ 1.15
NEDD4L-235ENST00000592601 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
NEDD4L-235ENST00000592601 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms