RNA–Protein interactions for RNA: ENST00000592235.1

NCLN-207, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 380 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-207ENST00000592235 NISCHQ9Y2I1 1504 aa42.25■■■■■ 4.35
NCLN-207ENST00000592235 CCDC180Q9P1Z9 1646 aa37.87■■■■□ 3.65
NCLN-207ENST00000592235 ABCC9O60706 1549 aa37.47■■■■□ 3.59
NCLN-207ENST00000592235 RB1CC1Q8TDY2 1594 aa35.88■■■■□ 3.33
NCLN-207ENST00000592235 NACADO15069 1562 aa35.72■■■■□ 3.31
NCLN-207ENST00000592235 MYO15BQ96JP2 1530 aa35.39■■■■□ 3.26
NCLN-207ENST00000592235 DCAF8L2P0C7V8 631 aa35.36■■■■□ 3.25
NCLN-207ENST00000592235 UNC13AQ9UPW8 1703 aa35.11■■■■□ 3.21
NCLN-207ENST00000592235 ZCCHC6Q5VYS8 1495 aaKnown RBP35.08■■■■□ 3.21
NCLN-207ENST00000592235 DCAF1Q9Y4B6 1507 aa35.01■■■■□ 3.19
NCLN-207ENST00000592235 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
NCLN-207ENST00000592235 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.188e-6■□□□□ 8.9
NCLN-207ENST00000592235 BICRAQ9NZM4 1560 aa34.83■■■■□ 3.17
NCLN-207ENST00000592235 SHROOM4Q9ULL8 1493 aa34.47■■■■□ 3.11
NCLN-207ENST00000592235 SCRIBQ14160 1630 aa34.38■■■■□ 3.09
NCLN-207ENST00000592235 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
NCLN-207ENST00000592235 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
NCLN-207ENST00000592235 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
NCLN-207ENST00000592235 NCAPD3P42695 1498 aa32.97■■■□□ 2.87
NCLN-207ENST00000592235 SMARCA4P51532 1647 aa32.91■■■□□ 2.86
NCLN-207ENST00000592235 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
NCLN-207ENST00000592235 SMARCA2P51531 1590 aa32.81■■■□□ 2.84
NCLN-207ENST00000592235 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
NCLN-207ENST00000592235 HMGXB3Q12766 1538 aa32.76■■■□□ 2.83
NCLN-207ENST00000592235 PEG3Q9GZU2 1588 aa32.66■■■□□ 2.82
NCLN-207ENST00000592235 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
NCLN-207ENST00000592235 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
NCLN-207ENST00000592235 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
NCLN-207ENST00000592235 CUX2O14529 1486 aa32.3■■■□□ 2.76
NCLN-207ENST00000592235 NESP48681 1621 aa32.27■■■□□ 2.76
NCLN-207ENST00000592235 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
NCLN-207ENST00000592235 WIZO95785 1651 aa32.14■■■□□ 2.74
NCLN-207ENST00000592235 THOC2Q8NI27 1593 aaKnown RBP31.98■■■□□ 2.71
NCLN-207ENST00000592235 DNAJC5Q9H3Z4 198 aa31.97■■■□□ 2.71
NCLN-207ENST00000592235 PDS5BQ9NTI5 1447 aa31.96■■■□□ 2.71
NCLN-207ENST00000592235 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
NCLN-207ENST00000592235 RSF1Q96T23 1441 aaPredicted RBP31.94■■■□□ 2.7
NCLN-207ENST00000592235 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
NCLN-207ENST00000592235 TOP2AP11388 1531 aaKnown RBP31.78■■■□□ 2.68
NCLN-207ENST00000592235 CFTRP13569 1480 aa31.65■■■□□ 2.66
NCLN-207ENST00000592235 MRC2Q9UBG0 1479 aa31.65■■■□□ 2.66
NCLN-207ENST00000592235 WDR62O43379 1518 aa31.6■■■□□ 2.65
NCLN-207ENST00000592235 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
NCLN-207ENST00000592235 FANCD2Q9BXW9 1451 aa31.55■■■□□ 2.64
NCLN-207ENST00000592235 PRDM2Q13029 1718 aa31.42■■■□□ 2.62
NCLN-207ENST00000592235 CCDC88BA6NC98 1476 aa31.4■■■□□ 2.62
NCLN-207ENST00000592235 URB2Q14146 1524 aaKnown RBP31.28■■■□□ 2.6
NCLN-207ENST00000592235 ABCC8Q09428 1581 aa31■■■□□ 2.55
NCLN-207ENST00000592235 TOPBP1Q92547 1522 aa31■■■□□ 2.55
NCLN-207ENST00000592235 IFT140Q96RY7 1462 aa30.95■■■□□ 2.55
NCLN-207ENST00000592235 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
NCLN-207ENST00000592235 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
NCLN-207ENST00000592235 OSCARQ8IYS5 282 aa30.81■■■□□ 2.52
NCLN-207ENST00000592235 TARBP1Q13395 1621 aaKnown RBP30.74■■■□□ 2.51
NCLN-207ENST00000592235 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
NCLN-207ENST00000592235 POLA1P09884 1462 aaPredicted RBP30.7■■■□□ 2.5
NCLN-207ENST00000592235 AQRO60306 1485 aaKnown RBP eCLIP30.57■■■□□ 2.487e-8■■■■■ 31.5
NCLN-207ENST00000592235 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
NCLN-207ENST00000592235 CUX1P39880 1505 aa30.54■■■□□ 2.48
NCLN-207ENST00000592235 SOGA1O94964 1423 aa30.54■■■□□ 2.48
NCLN-207ENST00000592235 RAD54L2Q9Y4B4 1467 aa30.53■■■□□ 2.48
NCLN-207ENST00000592235 TRIM41Q8WV44 630 aa30.52■■■□□ 2.48
NCLN-207ENST00000592235 WDR97A6NE52 1622 aa30.51■■■□□ 2.48
NCLN-207ENST00000592235 FGD5Q6ZNL6 1462 aa30.51■■■□□ 2.48
NCLN-207ENST00000592235 CHD1O14646 1710 aa30.44■■■□□ 2.46
NCLN-207ENST00000592235 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
NCLN-207ENST00000592235 RIMBP3CA6NJZ7 1639 aa30.4■■■□□ 2.46
NCLN-207ENST00000592235 RIMBP3BA6NNM3 1639 aa30.4■■■□□ 2.46
NCLN-207ENST00000592235 RIMBP3Q9UFD9 1639 aa30.4■■■□□ 2.46
NCLN-207ENST00000592235 ARHGEF11O15085 1522 aa30.32■■■□□ 2.44
NCLN-207ENST00000592235 GRIN2BQ13224 1484 aa30.27■■■□□ 2.44
NCLN-207ENST00000592235 SNAPC4Q5SXM2 1469 aa30.27■■■□□ 2.44
NCLN-207ENST00000592235 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
NCLN-207ENST00000592235 ABCA10Q8WWZ4 1543 aa30.24■■■□□ 2.43
NCLN-207ENST00000592235 FBLN2P98095 1184 aa30.24■■■□□ 2.43
NCLN-207ENST00000592235 GAPVD1Q14C86 1478 aa30.19■■■□□ 2.42
NCLN-207ENST00000592235 PBRM1Q86U86 1689 aa30.18■■■□□ 2.42
NCLN-207ENST00000592235 ABCA5Q8WWZ7 1642 aa30.18■■■□□ 2.42
NCLN-207ENST00000592235 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
NCLN-207ENST00000592235 TOP2BQ02880 1626 aa30.16■■■□□ 2.42
NCLN-207ENST00000592235 SYNJ2O15056 1496 aa30.15■■■□□ 2.42
NCLN-207ENST00000592235 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
NCLN-207ENST00000592235 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
NCLN-207ENST00000592235 CLASP1Q7Z460 1538 aa30.12■■■□□ 2.41
NCLN-207ENST00000592235 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
NCLN-207ENST00000592235 ARAP1Q96P48 1450 aa30.04■■■□□ 2.4
NCLN-207ENST00000592235 CYB5RLQ6IPT4 315 aa30.01■■■□□ 2.39
NCLN-207ENST00000592235 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
NCLN-207ENST00000592235 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
NCLN-207ENST00000592235 ERICH3Q5RHP9 1530 aa29.87■■■□□ 2.37
NCLN-207ENST00000592235 FHAD1B1AJZ9 1412 aa29.83■■■□□ 2.37
NCLN-207ENST00000592235 NUP160Q12769 1436 aa29.8■■■□□ 2.36
NCLN-207ENST00000592235 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
NCLN-207ENST00000592235 SHROOM2Q13796 1616 aa29.67■■■□□ 2.34
NCLN-207ENST00000592235 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
NCLN-207ENST00000592235 TRHP20396 242 aaPredicted RBP29.55■■■□□ 2.32
NCLN-207ENST00000592235 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
NCLN-207ENST00000592235 IGF1RP08069 1367 aa29.52■■■□□ 2.32
NCLN-207ENST00000592235 CUL7Q14999 1698 aa29.49■■■□□ 2.31
NCLN-207ENST00000592235 RUSC2Q8N2Y8 1516 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms