RNA–Protein interactions for RNA: ENST00000592216.2

ARID3A-207, Transcript of AT-rich interaction domain 3A, humanhuman

TSL 2

Gene ARID3A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3A-207ENST00000592216 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
ARID3A-207ENST00000592216 CCDC180Q9P1Z9 1646 aa26.64■■□□□ 1.85
ARID3A-207ENST00000592216 ABCC9O60706 1549 aa26.49■■□□□ 1.83
ARID3A-207ENST00000592216 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
ARID3A-207ENST00000592216 NACADO15069 1562 aa25.1■■□□□ 1.61
ARID3A-207ENST00000592216 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
ARID3A-207ENST00000592216 UNC13AQ9UPW8 1703 aa24.79■■□□□ 1.56
ARID3A-207ENST00000592216 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
ARID3A-207ENST00000592216 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.54
ARID3A-207ENST00000592216 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
ARID3A-207ENST00000592216 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
ARID3A-207ENST00000592216 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
ARID3A-207ENST00000592216 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
ARID3A-207ENST00000592216 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
ARID3A-207ENST00000592216 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
ARID3A-207ENST00000592216 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
ARID3A-207ENST00000592216 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
ARID3A-207ENST00000592216 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
ARID3A-207ENST00000592216 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
ARID3A-207ENST00000592216 NCAPD3P42695 1498 aa23.14■■□□□ 1.29
ARID3A-207ENST00000592216 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
ARID3A-207ENST00000592216 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
ARID3A-207ENST00000592216 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
ARID3A-207ENST00000592216 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
ARID3A-207ENST00000592216 MROH2BQ7Z745 1585 aa22.94■■□□□ 1.26
ARID3A-207ENST00000592216 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
ARID3A-207ENST00000592216 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
ARID3A-207ENST00000592216 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
ARID3A-207ENST00000592216 NESP48681 1621 aa22.81■■□□□ 1.24
ARID3A-207ENST00000592216 WIZO95785 1651 aa22.73■■□□□ 1.23
ARID3A-207ENST00000592216 CUX2O14529 1486 aa22.69■■□□□ 1.22
ARID3A-207ENST00000592216 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
ARID3A-207ENST00000592216 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.2
ARID3A-207ENST00000592216 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
ARID3A-207ENST00000592216 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
ARID3A-207ENST00000592216 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
ARID3A-207ENST00000592216 DNAJC5Q9H3Z4 198 aa22.45■■□□□ 1.18
ARID3A-207ENST00000592216 CADPSQ9ULU8 1353 aa22.45■■□□□ 1.18
ARID3A-207ENST00000592216 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
ARID3A-207ENST00000592216 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
ARID3A-207ENST00000592216 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
ARID3A-207ENST00000592216 WDR62O43379 1518 aa22.25■■□□□ 1.15
ARID3A-207ENST00000592216 CFTRP13569 1480 aa22.24■■□□□ 1.15
ARID3A-207ENST00000592216 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
ARID3A-207ENST00000592216 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
ARID3A-207ENST00000592216 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
ARID3A-207ENST00000592216 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
ARID3A-207ENST00000592216 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
ARID3A-207ENST00000592216 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
ARID3A-207ENST00000592216 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
ARID3A-207ENST00000592216 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.08
ARID3A-207ENST00000592216 ABCC8Q09428 1581 aa21.75■■□□□ 1.07
ARID3A-207ENST00000592216 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
ARID3A-207ENST00000592216 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
ARID3A-207ENST00000592216 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
ARID3A-207ENST00000592216 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
ARID3A-207ENST00000592216 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
ARID3A-207ENST00000592216 TRIM41Q8WV44 630 aa21.63■■□□□ 1.05
ARID3A-207ENST00000592216 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.042e-8■□□□□ 9.6
ARID3A-207ENST00000592216 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.04
ARID3A-207ENST00000592216 CUX1P39880 1505 aa21.55■■□□□ 1.04
ARID3A-207ENST00000592216 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
ARID3A-207ENST00000592216 CHD1O14646 1710 aa21.53■■□□□ 1.04
ARID3A-207ENST00000592216 SOGA1O94964 1423 aa21.52■■□□□ 1.04
ARID3A-207ENST00000592216 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
ARID3A-207ENST00000592216 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
ARID3A-207ENST00000592216 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
ARID3A-207ENST00000592216 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
ARID3A-207ENST00000592216 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
ARID3A-207ENST00000592216 FBLN2P98095 1184 aa21.41■■□□□ 1.02
ARID3A-207ENST00000592216 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
ARID3A-207ENST00000592216 SNAPC4Q5SXM2 1469 aa21.38■■□□□ 1.01
ARID3A-207ENST00000592216 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
ARID3A-207ENST00000592216 GRIN2BQ13224 1484 aa21.32■■□□□ 1
ARID3A-207ENST00000592216 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
ARID3A-207ENST00000592216 GAPVD1Q14C86 1478 aa21.27■■□□□ 1
ARID3A-207ENST00000592216 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
ARID3A-207ENST00000592216 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
ARID3A-207ENST00000592216 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
ARID3A-207ENST00000592216 SYNJ1O43426 1573 aa21.27■□□□□ 0.99
ARID3A-207ENST00000592216 TOP2BQ02880 1626 aa21.25■□□□□ 0.99
ARID3A-207ENST00000592216 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
ARID3A-207ENST00000592216 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
ARID3A-207ENST00000592216 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
ARID3A-207ENST00000592216 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
ARID3A-207ENST00000592216 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
ARID3A-207ENST00000592216 ARAP1Q96P48 1450 aa21.18■□□□□ 0.98
ARID3A-207ENST00000592216 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
ARID3A-207ENST00000592216 GRIN2AQ12879 1464 aa21.06■□□□□ 0.96
ARID3A-207ENST00000592216 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
ARID3A-207ENST00000592216 CEP170Q5SW79 1584 aa21.01■□□□□ 0.95
ARID3A-207ENST00000592216 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
ARID3A-207ENST00000592216 NUP160Q12769 1436 aa20.95■□□□□ 0.94
ARID3A-207ENST00000592216 ERCC6L2Q5T890 1561 aa20.94■□□□□ 0.94
ARID3A-207ENST00000592216 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
ARID3A-207ENST00000592216 SHROOM2Q13796 1616 aa20.88■□□□□ 0.93
ARID3A-207ENST00000592216 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
ARID3A-207ENST00000592216 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
ARID3A-207ENST00000592216 CUL7Q14999 1698 aa20.78■□□□□ 0.92
ARID3A-207ENST00000592216 PRG4Q92954 1404 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms