RNA–Protein interactions for RNA: ENST00000591990.5

ITGA2B-205, Transcript of integrin subunit alpha 2b, humanhuman

TSL 4

Gene ITGA2B, Length 565 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA2B-205ENST00000591990 NISCHQ9Y2I1 1504 aa36.26■■■■□ 3.4
ITGA2B-205ENST00000591990 CCDC180Q9P1Z9 1646 aa32.24■■■□□ 2.75
ITGA2B-205ENST00000591990 ABCC9O60706 1549 aa31.45■■■□□ 2.63
ITGA2B-205ENST00000591990 RB1CC1Q8TDY2 1594 aa30.29■■■□□ 2.44
ITGA2B-205ENST00000591990 NACADO15069 1562 aa30.26■■■□□ 2.43
ITGA2B-205ENST00000591990 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
ITGA2B-205ENST00000591990 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
ITGA2B-205ENST00000591990 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
ITGA2B-205ENST00000591990 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
ITGA2B-205ENST00000591990 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
ITGA2B-205ENST00000591990 SCRIBQ14160 1630 aa29.45■■■□□ 2.3
ITGA2B-205ENST00000591990 PABPN1Q86U42 306 aaKnown RBP eCLIP29.38■■■□□ 2.29
ITGA2B-205ENST00000591990 BICRAQ9NZM4 1560 aa29.36■■■□□ 2.29
ITGA2B-205ENST00000591990 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
ITGA2B-205ENST00000591990 DNAJC5BQ9UF47 199 aa28.74■■■□□ 2.19
ITGA2B-205ENST00000591990 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
ITGA2B-205ENST00000591990 CC2D2AQ9P2K1 1620 aa28.46■■■□□ 2.15
ITGA2B-205ENST00000591990 CECR2Q9BXF3 1484 aa28.24■■■□□ 2.11
ITGA2B-205ENST00000591990 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
ITGA2B-205ENST00000591990 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
ITGA2B-205ENST00000591990 MROH2BQ7Z745 1585 aa27.96■■■□□ 2.07
ITGA2B-205ENST00000591990 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
ITGA2B-205ENST00000591990 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
ITGA2B-205ENST00000591990 NCAPD3P42695 1498 aa27.89■■■□□ 2.05
ITGA2B-205ENST00000591990 PEG3Q9GZU2 1588 aa27.83■■■□□ 2.05
ITGA2B-205ENST00000591990 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
ITGA2B-205ENST00000591990 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
ITGA2B-205ENST00000591990 WIZO95785 1651 aa27.68■■■□□ 2.02
ITGA2B-205ENST00000591990 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
ITGA2B-205ENST00000591990 TOP2AP11388 1531 aaKnown RBP27.39■■□□□ 1.98
ITGA2B-205ENST00000591990 NESP48681 1621 aa27.24■■□□□ 1.95
ITGA2B-205ENST00000591990 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
ITGA2B-205ENST00000591990 ERCC6Q03468 1493 aa27.11■■□□□ 1.93
ITGA2B-205ENST00000591990 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
ITGA2B-205ENST00000591990 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
ITGA2B-205ENST00000591990 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
ITGA2B-205ENST00000591990 PDS5BQ9NTI5 1447 aa26.98■■□□□ 1.91
ITGA2B-205ENST00000591990 KIF21AQ7Z4S6 1674 aa26.96■■□□□ 1.91
ITGA2B-205ENST00000591990 CFTRP13569 1480 aa26.95■■□□□ 1.91
ITGA2B-205ENST00000591990 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
ITGA2B-205ENST00000591990 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
ITGA2B-205ENST00000591990 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
ITGA2B-205ENST00000591990 CEP164Q9UPV0 1460 aa26.78■■□□□ 1.88
ITGA2B-205ENST00000591990 CUX2O14529 1486 aa26.77■■□□□ 1.88
ITGA2B-205ENST00000591990 MRC2Q9UBG0 1479 aa26.72■■□□□ 1.87
ITGA2B-205ENST00000591990 WDR62O43379 1518 aa26.62■■□□□ 1.85
ITGA2B-205ENST00000591990 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
ITGA2B-205ENST00000591990 DNAJC5Q9H3Z4 198 aa26.46■■□□□ 1.83
ITGA2B-205ENST00000591990 TOPBP1Q92547 1522 aa26.39■■□□□ 1.82
ITGA2B-205ENST00000591990 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
ITGA2B-205ENST00000591990 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
ITGA2B-205ENST00000591990 CUX1P39880 1505 aa26.24■■□□□ 1.79
ITGA2B-205ENST00000591990 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
ITGA2B-205ENST00000591990 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
ITGA2B-205ENST00000591990 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
ITGA2B-205ENST00000591990 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
ITGA2B-205ENST00000591990 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.77
ITGA2B-205ENST00000591990 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
ITGA2B-205ENST00000591990 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
ITGA2B-205ENST00000591990 SOGA1O94964 1423 aa26.05■■□□□ 1.76
ITGA2B-205ENST00000591990 BIVM-ERCC5R4GMW8 1640 aa26.04■■□□□ 1.76
ITGA2B-205ENST00000591990 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
ITGA2B-205ENST00000591990 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
ITGA2B-205ENST00000591990 EIF4G3O43432 1585 aaKnown RBP26.01■■□□□ 1.75
ITGA2B-205ENST00000591990 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.742e-7■■■■■ 43.2
ITGA2B-205ENST00000591990 WDR97A6NE52 1622 aa25.93■■□□□ 1.74
ITGA2B-205ENST00000591990 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
ITGA2B-205ENST00000591990 ABCA10Q8WWZ4 1543 aa25.87■■□□□ 1.73
ITGA2B-205ENST00000591990 ABCA5Q8WWZ7 1642 aa25.78■■□□□ 1.72
ITGA2B-205ENST00000591990 GAPVD1Q14C86 1478 aa25.77■■□□□ 1.72
ITGA2B-205ENST00000591990 PBRM1Q86U86 1689 aa25.76■■□□□ 1.71
ITGA2B-205ENST00000591990 GRIN2BQ13224 1484 aa25.75■■□□□ 1.71
ITGA2B-205ENST00000591990 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
ITGA2B-205ENST00000591990 CHD1O14646 1710 aa25.7■■□□□ 1.7
ITGA2B-205ENST00000591990 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
ITGA2B-205ENST00000591990 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
ITGA2B-205ENST00000591990 FBLN2P98095 1184 aa25.61■■□□□ 1.69
ITGA2B-205ENST00000591990 SYNJ2O15056 1496 aa25.57■■□□□ 1.68
ITGA2B-205ENST00000591990 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
ITGA2B-205ENST00000591990 ADAMTS12P58397 1594 aa25.55■■□□□ 1.68
ITGA2B-205ENST00000591990 CHMP7Q8WUX9 453 aaPredicted RBP25.54■■□□□ 1.68
ITGA2B-205ENST00000591990 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
ITGA2B-205ENST00000591990 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
ITGA2B-205ENST00000591990 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
ITGA2B-205ENST00000591990 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
ITGA2B-205ENST00000591990 IGF1RP08069 1367 aa25.39■■□□□ 1.65
ITGA2B-205ENST00000591990 CUL7Q14999 1698 aa25.38■■□□□ 1.65
ITGA2B-205ENST00000591990 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
ITGA2B-205ENST00000591990 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
ITGA2B-205ENST00000591990 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
ITGA2B-205ENST00000591990 NUP160Q12769 1436 aa25.29■■□□□ 1.64
ITGA2B-205ENST00000591990 RIMBP3CA6NJZ7 1639 aa25.29■■□□□ 1.64
ITGA2B-205ENST00000591990 RIMBP3BA6NNM3 1639 aa25.29■■□□□ 1.64
ITGA2B-205ENST00000591990 RIMBP3Q9UFD9 1639 aa25.29■■□□□ 1.64
ITGA2B-205ENST00000591990 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
ITGA2B-205ENST00000591990 CARMIL1Q5VZK9 1371 aa25.26■■□□□ 1.63
ITGA2B-205ENST00000591990 CHIC1Q5VXU3 224 aa25.25■■□□□ 1.63
ITGA2B-205ENST00000591990 RAPGEF2Q9Y4G8 1499 aa25.13■■□□□ 1.61
ITGA2B-205ENST00000591990 SHROOM2Q13796 1616 aa25.11■■□□□ 1.61
ITGA2B-205ENST00000591990 EEA1Q15075 1411 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms