RNA–Protein interactions for RNA: ENST00000591631.2

AP3D1-210, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-210ENST00000591631 NISCHQ9Y2I1 1504 aa40.06■■■■■ 4
AP3D1-210ENST00000591631 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.36
AP3D1-210ENST00000591631 ABCC9O60706 1549 aa35.8■■■■□ 3.32
AP3D1-210ENST00000591631 RB1CC1Q8TDY2 1594 aa34.21■■■■□ 3.07
AP3D1-210ENST00000591631 NACADO15069 1562 aa33.98■■■■□ 3.03
AP3D1-210ENST00000591631 DCAF8L2P0C7V8 631 aa33.76■■■□□ 2.99
AP3D1-210ENST00000591631 MYO15BQ96JP2 1530 aa33.53■■■□□ 2.96
AP3D1-210ENST00000591631 UNC13AQ9UPW8 1703 aa33.46■■■□□ 2.95
AP3D1-210ENST00000591631 DNAJC5BQ9UF47 199 aa33.45■■■□□ 2.95
AP3D1-210ENST00000591631 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
AP3D1-210ENST00000591631 ZCCHC6Q5VYS8 1495 aaKnown RBP33.23■■■□□ 2.91
AP3D1-210ENST00000591631 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
AP3D1-210ENST00000591631 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
AP3D1-210ENST00000591631 SHROOM4Q9ULL8 1493 aa32.78■■■□□ 2.84
AP3D1-210ENST00000591631 SCRIBQ14160 1630 aa32.77■■■□□ 2.84
AP3D1-210ENST00000591631 CC2D2AQ9P2K1 1620 aa32.39■■■□□ 2.78
AP3D1-210ENST00000591631 EIF4G1Q04637 1599 aaKnown RBP32.35■■■□□ 2.77
AP3D1-210ENST00000591631 CECR2Q9BXF3 1484 aa32.26■■■□□ 2.75
AP3D1-210ENST00000591631 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
AP3D1-210ENST00000591631 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
AP3D1-210ENST00000591631 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
AP3D1-210ENST00000591631 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
AP3D1-210ENST00000591631 HMGXB3Q12766 1538 aa31.14■■■□□ 2.58
AP3D1-210ENST00000591631 BAZ1AQ9NRL2 1556 aaPredicted RBP31.14■■■□□ 2.58
AP3D1-210ENST00000591631 ERCC6Q03468 1493 aa30.98■■■□□ 2.55
AP3D1-210ENST00000591631 BAZ1BQ9UIG0 1483 aaKnown RBP30.97■■■□□ 2.55
AP3D1-210ENST00000591631 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
AP3D1-210ENST00000591631 CUX2O14529 1486 aa30.88■■■□□ 2.53
AP3D1-210ENST00000591631 MROH2BQ7Z745 1585 aa30.84■■■□□ 2.53
AP3D1-210ENST00000591631 DNAJC5Q9H3Z4 198 aa30.78■■■□□ 2.52
AP3D1-210ENST00000591631 NESP48681 1621 aa30.76■■■□□ 2.52
AP3D1-210ENST00000591631 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
AP3D1-210ENST00000591631 WIZO95785 1651 aa30.52■■■□□ 2.48
AP3D1-210ENST00000591631 THOC2Q8NI27 1593 aaKnown RBP30.5■■■□□ 2.47
AP3D1-210ENST00000591631 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
AP3D1-210ENST00000591631 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
AP3D1-210ENST00000591631 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
AP3D1-210ENST00000591631 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
AP3D1-210ENST00000591631 MRC2Q9UBG0 1479 aa30.18■■■□□ 2.42
AP3D1-210ENST00000591631 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
AP3D1-210ENST00000591631 WDR62O43379 1518 aa30.11■■■□□ 2.41
AP3D1-210ENST00000591631 CEP164Q9UPV0 1460 aa30.09■■■□□ 2.41
AP3D1-210ENST00000591631 CFTRP13569 1480 aa30.04■■■□□ 2.4
AP3D1-210ENST00000591631 FANCD2Q9BXW9 1451 aa30.04■■■□□ 2.4
AP3D1-210ENST00000591631 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
AP3D1-210ENST00000591631 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.35
AP3D1-210ENST00000591631 CCDC88BA6NC98 1476 aa29.75■■■□□ 2.35
AP3D1-210ENST00000591631 IFT140Q96RY7 1462 aa29.48■■■□□ 2.31
AP3D1-210ENST00000591631 ABCC8Q09428 1581 aa29.47■■■□□ 2.31
AP3D1-210ENST00000591631 TOPBP1Q92547 1522 aa29.47■■■□□ 2.31
AP3D1-210ENST00000591631 OSCARQ8IYS5 282 aa29.44■■■□□ 2.3
AP3D1-210ENST00000591631 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
AP3D1-210ENST00000591631 DNMBPQ6XZF7 1577 aa29.42■■■□□ 2.3
AP3D1-210ENST00000591631 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
AP3D1-210ENST00000591631 EIF4G3O43432 1585 aaKnown RBP29.29■■■□□ 2.28
AP3D1-210ENST00000591631 TARBP1Q13395 1621 aaKnown RBP29.22■■■□□ 2.27
AP3D1-210ENST00000591631 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
AP3D1-210ENST00000591631 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.252e-6■■■□□ 19.2
AP3D1-210ENST00000591631 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
AP3D1-210ENST00000591631 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
AP3D1-210ENST00000591631 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
AP3D1-210ENST00000591631 CHD1O14646 1710 aa29.08■■■□□ 2.25
AP3D1-210ENST00000591631 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
AP3D1-210ENST00000591631 SOGA1O94964 1423 aa29.03■■■□□ 2.24
AP3D1-210ENST00000591631 FGD5Q6ZNL6 1462 aa29.01■■■□□ 2.23
AP3D1-210ENST00000591631 WDR97A6NE52 1622 aa29.01■■■□□ 2.23
AP3D1-210ENST00000591631 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
AP3D1-210ENST00000591631 CUX1P39880 1505 aa28.99■■■□□ 2.23
AP3D1-210ENST00000591631 SUPT5HO00267 1087 aaKnown RBP28.97■■■□□ 2.23
AP3D1-210ENST00000591631 TDRD9Q8NDG6 1382 aaKnown RBP28.94■■■□□ 2.22
AP3D1-210ENST00000591631 FBLN2P98095 1184 aa28.94■■■□□ 2.22
AP3D1-210ENST00000591631 SNAPC4Q5SXM2 1469 aa28.85■■■□□ 2.21
AP3D1-210ENST00000591631 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
AP3D1-210ENST00000591631 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
AP3D1-210ENST00000591631 PBRM1Q86U86 1689 aa28.78■■■□□ 2.2
AP3D1-210ENST00000591631 CHMP7Q8WUX9 453 aaPredicted RBP28.75■■■□□ 2.19
AP3D1-210ENST00000591631 SYNJ1O43426 1573 aa28.74■■■□□ 2.19
AP3D1-210ENST00000591631 CYB5RLQ6IPT4 315 aa28.73■■■□□ 2.19
AP3D1-210ENST00000591631 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
AP3D1-210ENST00000591631 SYNJ2O15056 1496 aa28.71■■■□□ 2.19
AP3D1-210ENST00000591631 ABCA10Q8WWZ4 1543 aa28.69■■■□□ 2.18
AP3D1-210ENST00000591631 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
AP3D1-210ENST00000591631 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
AP3D1-210ENST00000591631 ABCA5Q8WWZ7 1642 aa28.67■■■□□ 2.18
AP3D1-210ENST00000591631 BIVM-ERCC5R4GMW8 1640 aa28.62■■■□□ 2.17
AP3D1-210ENST00000591631 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
AP3D1-210ENST00000591631 TOP2BQ02880 1626 aa28.6■■■□□ 2.17
AP3D1-210ENST00000591631 ADAMTS12P58397 1594 aa28.45■■■□□ 2.15
AP3D1-210ENST00000591631 GRIN2AQ12879 1464 aa28.43■■■□□ 2.14
AP3D1-210ENST00000591631 TRHP20396 242 aaPredicted RBP28.42■■■□□ 2.14
AP3D1-210ENST00000591631 ERICH3Q5RHP9 1530 aa28.37■■■□□ 2.13
AP3D1-210ENST00000591631 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
AP3D1-210ENST00000591631 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
AP3D1-210ENST00000591631 NUP160Q12769 1436 aa28.3■■■□□ 2.12
AP3D1-210ENST00000591631 SHROOM2Q13796 1616 aa28.21■■■□□ 2.11
AP3D1-210ENST00000591631 ERCC6L2Q5T890 1561 aa28.2■■■□□ 2.11
AP3D1-210ENST00000591631 RUSC2Q8N2Y8 1516 aa28.05■■■□□ 2.08
AP3D1-210ENST00000591631 KIF27Q86VH2 1401 aa28.03■■■□□ 2.08
AP3D1-210ENST00000591631 PRG4Q92954 1404 aaPredicted RBP28.03■■■□□ 2.08
AP3D1-210ENST00000591631 CUL7Q14999 1698 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms