RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, humanhuman

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-208ENST00000591338 AEBP2Q6ZN18 517 aaPredicted RBP30.31■■■□□ 2.44
LINC00662-208ENST00000591338 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
LINC00662-208ENST00000591338 NISCHQ9Y2I1 1504 aa27.67■■■□□ 2.02
LINC00662-208ENST00000591338 SENP3Q9H4L4 574 aaPredicted RBP25.9■■□□□ 1.74
LINC00662-208ENST00000591338 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.69
LINC00662-208ENST00000591338 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
LINC00662-208ENST00000591338 FOXD1Q16676 465 aa24.04■■□□□ 1.44
LINC00662-208ENST00000591338 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
LINC00662-208ENST00000591338 ABCC9O60706 1549 aa23.25■■□□□ 1.31
LINC00662-208ENST00000591338 ZCCHC6Q5VYS8 1495 aaKnown RBP23.14■■□□□ 1.29
LINC00662-208ENST00000591338 DCAF8L2P0C7V8 631 aa23■■□□□ 1.27
LINC00662-208ENST00000591338 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
LINC00662-208ENST00000591338 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
LINC00662-208ENST00000591338 PPP6R1Q9UPN7 881 aa22.71■■□□□ 1.23
LINC00662-208ENST00000591338 NACADO15069 1562 aa22.7■■□□□ 1.22
LINC00662-208ENST00000591338 ADRA2BP18089 450 aa22.68■■□□□ 1.22
LINC00662-208ENST00000591338 PIAS4Q8N2W9 510 aaPredicted RBP22.58■■□□□ 1.21
LINC00662-208ENST00000591338 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
LINC00662-208ENST00000591338 MSH5O43196 834 aa22.44■■□□□ 1.18
LINC00662-208ENST00000591338 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
LINC00662-208ENST00000591338 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
LINC00662-208ENST00000591338 UNC13AQ9UPW8 1703 aa22.09■■□□□ 1.13
LINC00662-208ENST00000591338 PABPN1Q86U42 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
LINC00662-208ENST00000591338 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
LINC00662-208ENST00000591338 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
LINC00662-208ENST00000591338 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
LINC00662-208ENST00000591338 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
LINC00662-208ENST00000591338 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
LINC00662-208ENST00000591338 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
LINC00662-208ENST00000591338 SMARCA4P51532 1647 aa21.31■■□□□ 1
LINC00662-208ENST00000591338 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
LINC00662-208ENST00000591338 EIF4G1Q04637 1599 aaKnown RBP21.25■□□□□ 0.99
LINC00662-208ENST00000591338 POTEDQ86YR6 584 aa21.23■□□□□ 0.99
LINC00662-208ENST00000591338 WIZO95785 1651 aa21.15■□□□□ 0.98
LINC00662-208ENST00000591338 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
LINC00662-208ENST00000591338 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
LINC00662-208ENST00000591338 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
LINC00662-208ENST00000591338 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
LINC00662-208ENST00000591338 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
LINC00662-208ENST00000591338 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
LINC00662-208ENST00000591338 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
LINC00662-208ENST00000591338 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
LINC00662-208ENST00000591338 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
LINC00662-208ENST00000591338 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
LINC00662-208ENST00000591338 MAPK8IP2Q13387 824 aaPredicted RBP20.71■□□□□ 0.91
LINC00662-208ENST00000591338 PPP4R3CPQ6ZMV5 832 aa20.63■□□□□ 0.89
LINC00662-208ENST00000591338 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
LINC00662-208ENST00000591338 CADPSQ9ULU8 1353 aa20.41■□□□□ 0.86
LINC00662-208ENST00000591338 CFTRP13569 1480 aa20.39■□□□□ 0.85
LINC00662-208ENST00000591338 NESP48681 1621 aa20.31■□□□□ 0.84
LINC00662-208ENST00000591338 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
LINC00662-208ENST00000591338 PRDM2Q13029 1718 aa20.23■□□□□ 0.83
LINC00662-208ENST00000591338 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
LINC00662-208ENST00000591338 PDS5BQ9NTI5 1447 aa20.16■□□□□ 0.82
LINC00662-208ENST00000591338 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
LINC00662-208ENST00000591338 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
LINC00662-208ENST00000591338 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
LINC00662-208ENST00000591338 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.8
LINC00662-208ENST00000591338 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
LINC00662-208ENST00000591338 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
LINC00662-208ENST00000591338 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
LINC00662-208ENST00000591338 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
LINC00662-208ENST00000591338 CUX1P39880 1505 aa19.98■□□□□ 0.79
LINC00662-208ENST00000591338 ERCC6Q03468 1493 aa19.96■□□□□ 0.79
LINC00662-208ENST00000591338 HOXD11P31277 338 aaPredicted RBP19.95■□□□□ 0.78
LINC00662-208ENST00000591338 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
LINC00662-208ENST00000591338 BIVM-ERCC5R4GMW8 1640 aa19.93■□□□□ 0.78
LINC00662-208ENST00000591338 RNF216Q9NWF9 866 aaPredicted RBP19.92■□□□□ 0.78
LINC00662-208ENST00000591338 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
LINC00662-208ENST00000591338 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
LINC00662-208ENST00000591338 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
LINC00662-208ENST00000591338 MRC2Q9UBG0 1479 aa19.89■□□□□ 0.77
LINC00662-208ENST00000591338 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
LINC00662-208ENST00000591338 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
LINC00662-208ENST00000591338 WDR62O43379 1518 aa19.79■□□□□ 0.76
LINC00662-208ENST00000591338 POLA1P09884 1462 aaPredicted RBP19.76■□□□□ 0.75
LINC00662-208ENST00000591338 SOGA1O94964 1423 aa19.74■□□□□ 0.75
LINC00662-208ENST00000591338 DCAF8L1A6NGE4 600 aa19.73■□□□□ 0.75
LINC00662-208ENST00000591338 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
LINC00662-208ENST00000591338 FAM9AQ8IZU1 332 aaPredicted RBP19.71■□□□□ 0.75
LINC00662-208ENST00000591338 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
LINC00662-208ENST00000591338 CUX2O14529 1486 aa19.67■□□□□ 0.74
LINC00662-208ENST00000591338 DNAJC5Q9H3Z4 198 aa19.66■□□□□ 0.74
LINC00662-208ENST00000591338 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
LINC00662-208ENST00000591338 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
LINC00662-208ENST00000591338 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
LINC00662-208ENST00000591338 EEA1Q15075 1411 aa19.62■□□□□ 0.73
LINC00662-208ENST00000591338 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
LINC00662-208ENST00000591338 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
LINC00662-208ENST00000591338 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
LINC00662-208ENST00000591338 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
LINC00662-208ENST00000591338 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
LINC00662-208ENST00000591338 KCNA4P22459 653 aa19.55■□□□□ 0.72
LINC00662-208ENST00000591338 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.71
LINC00662-208ENST00000591338 IGF1RP08069 1367 aa19.5■□□□□ 0.71
LINC00662-208ENST00000591338 ZNF608Q9ULD9 1512 aaPredicted RBP19.5■□□□□ 0.71
LINC00662-208ENST00000591338 GAPVD1Q14C86 1478 aa19.49■□□□□ 0.71
LINC00662-208ENST00000591338 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
LINC00662-208ENST00000591338 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
LINC00662-208ENST00000591338 EHMT2Q96KQ7 1210 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms