RNA–Protein interactions for RNA: ENST00000591190.5

CXXC1-215, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-215ENST00000591190 NISCHQ9Y2I1 1504 aa39.14■■■■□ 3.86
CXXC1-215ENST00000591190 CCDC180Q9P1Z9 1646 aa35.07■■■■□ 3.21
CXXC1-215ENST00000591190 ABCC9O60706 1549 aa34.48■■■■□ 3.11
CXXC1-215ENST00000591190 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
CXXC1-215ENST00000591190 NACADO15069 1562 aa32.96■■■□□ 2.87
CXXC1-215ENST00000591190 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
CXXC1-215ENST00000591190 ZCCHC6Q5VYS8 1495 aaKnown RBP32.6■■■□□ 2.81
CXXC1-215ENST00000591190 DCAF8L2P0C7V8 631 aa32.59■■■□□ 2.81
CXXC1-215ENST00000591190 UNC13AQ9UPW8 1703 aa32.44■■■□□ 2.78
CXXC1-215ENST00000591190 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
CXXC1-215ENST00000591190 BICRAQ9NZM4 1560 aa32.13■■■□□ 2.73
CXXC1-215ENST00000591190 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
CXXC1-215ENST00000591190 SCRIBQ14160 1630 aa31.91■■■□□ 2.7
CXXC1-215ENST00000591190 DNAJC5BQ9UF47 199 aa31.84■■■□□ 2.69
CXXC1-215ENST00000591190 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
CXXC1-215ENST00000591190 EIF4G1Q04637 1599 aaKnown RBP31.29■■■□□ 2.6
CXXC1-215ENST00000591190 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
CXXC1-215ENST00000591190 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.56
CXXC1-215ENST00000591190 SMARCA4P51532 1647 aa30.51■■■□□ 2.47
CXXC1-215ENST00000591190 BAZ1AQ9NRL2 1556 aaPredicted RBP30.39■■■□□ 2.46
CXXC1-215ENST00000591190 NCAPD3P42695 1498 aa30.37■■■□□ 2.45
CXXC1-215ENST00000591190 ATAD2BQ9ULI0 1458 aa30.35■■■□□ 2.45
CXXC1-215ENST00000591190 SMARCA2P51531 1590 aa30.33■■■□□ 2.45
CXXC1-215ENST00000591190 HMGXB3Q12766 1538 aa30.29■■■□□ 2.44
CXXC1-215ENST00000591190 PEG3Q9GZU2 1588 aa30.23■■■□□ 2.43
CXXC1-215ENST00000591190 MROH2BQ7Z745 1585 aa30.17■■■□□ 2.42
CXXC1-215ENST00000591190 BAZ1BQ9UIG0 1483 aaKnown RBP30.09■■■□□ 2.41
CXXC1-215ENST00000591190 WIZO95785 1651 aa29.86■■■□□ 2.37
CXXC1-215ENST00000591190 NESP48681 1621 aa29.76■■■□□ 2.35
CXXC1-215ENST00000591190 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
CXXC1-215ENST00000591190 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
CXXC1-215ENST00000591190 RSF1Q96T23 1441 aaPredicted RBP29.66■■■□□ 2.34
CXXC1-215ENST00000591190 CUX2O14529 1486 aa29.6■■■□□ 2.33
CXXC1-215ENST00000591190 TOP2AP11388 1531 aaKnown RBP29.54■■■□□ 2.32
CXXC1-215ENST00000591190 KIF21AQ7Z4S6 1674 aa29.5■■■□□ 2.31
CXXC1-215ENST00000591190 THOC2Q8NI27 1593 aaKnown RBP29.5■■■□□ 2.31
CXXC1-215ENST00000591190 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
CXXC1-215ENST00000591190 PDS5BQ9NTI5 1447 aa29.4■■■□□ 2.3
CXXC1-215ENST00000591190 CFTRP13569 1480 aa29.23■■■□□ 2.27
CXXC1-215ENST00000591190 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
CXXC1-215ENST00000591190 CEP164Q9UPV0 1460 aa29.17■■■□□ 2.26
CXXC1-215ENST00000591190 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
CXXC1-215ENST00000591190 WDR62O43379 1518 aa29.15■■■□□ 2.26
CXXC1-215ENST00000591190 FANCD2Q9BXW9 1451 aa29.15■■■□□ 2.26
CXXC1-215ENST00000591190 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
CXXC1-215ENST00000591190 DNAJC5Q9H3Z4 198 aa28.91■■■□□ 2.22
CXXC1-215ENST00000591190 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
CXXC1-215ENST00000591190 TOPBP1Q92547 1522 aa28.66■■■□□ 2.18
CXXC1-215ENST00000591190 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
CXXC1-215ENST00000591190 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
CXXC1-215ENST00000591190 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
CXXC1-215ENST00000591190 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
CXXC1-215ENST00000591190 ZNF608Q9ULD9 1512 aaPredicted RBP28.44■■■□□ 2.14
CXXC1-215ENST00000591190 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
CXXC1-215ENST00000591190 EIF4G3O43432 1585 aaKnown RBP28.42■■■□□ 2.14
CXXC1-215ENST00000591190 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
CXXC1-215ENST00000591190 CUX1P39880 1505 aa28.34■■■□□ 2.13
CXXC1-215ENST00000591190 FGD5Q6ZNL6 1462 aa28.28■■■□□ 2.12
CXXC1-215ENST00000591190 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
CXXC1-215ENST00000591190 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
CXXC1-215ENST00000591190 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.13e-7■■■■■ 36.6
CXXC1-215ENST00000591190 SOGA1O94964 1423 aa28.18■■■□□ 2.1
CXXC1-215ENST00000591190 CHD1O14646 1710 aa28.12■■■□□ 2.09
CXXC1-215ENST00000591190 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
CXXC1-215ENST00000591190 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
CXXC1-215ENST00000591190 TDRD9Q8NDG6 1382 aaKnown RBP28.06■■■□□ 2.08
CXXC1-215ENST00000591190 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
CXXC1-215ENST00000591190 SYNJ1O43426 1573 aa28.02■■■□□ 2.08
CXXC1-215ENST00000591190 PBRM1Q86U86 1689 aa28.01■■■□□ 2.07
CXXC1-215ENST00000591190 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
CXXC1-215ENST00000591190 ABCA5Q8WWZ7 1642 aa27.99■■■□□ 2.07
CXXC1-215ENST00000591190 ABCA10Q8WWZ4 1543 aa27.98■■■□□ 2.07
CXXC1-215ENST00000591190 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.07
CXXC1-215ENST00000591190 GRIN2BQ13224 1484 aa27.95■■■□□ 2.07
CXXC1-215ENST00000591190 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
CXXC1-215ENST00000591190 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
CXXC1-215ENST00000591190 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
CXXC1-215ENST00000591190 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
CXXC1-215ENST00000591190 GAPVD1Q14C86 1478 aa27.9■■■□□ 2.06
CXXC1-215ENST00000591190 ARHGEF11O15085 1522 aa27.86■■■□□ 2.05
CXXC1-215ENST00000591190 SYNJ2O15056 1496 aa27.83■■■□□ 2.04
CXXC1-215ENST00000591190 FBLN2P98095 1184 aa27.81■■■□□ 2.04
CXXC1-215ENST00000591190 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
CXXC1-215ENST00000591190 CLASP1Q7Z460 1538 aa27.8■■■□□ 2.04
CXXC1-215ENST00000591190 ADAMTS12P58397 1594 aa27.74■■■□□ 2.03
CXXC1-215ENST00000591190 CHMP7Q8WUX9 453 aaPredicted RBP27.69■■■□□ 2.02
CXXC1-215ENST00000591190 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
CXXC1-215ENST00000591190 GRIN2AQ12879 1464 aa27.63■■■□□ 2.01
CXXC1-215ENST00000591190 ARAP1Q96P48 1450 aa27.62■■■□□ 2.01
CXXC1-215ENST00000591190 FHAD1B1AJZ9 1412 aa27.57■■■□□ 2
CXXC1-215ENST00000591190 CEP170Q5SW79 1584 aa27.55■■■□□ 2
CXXC1-215ENST00000591190 NUP160Q12769 1436 aa27.51■■□□□ 1.99
CXXC1-215ENST00000591190 CYB5RLQ6IPT4 315 aa27.43■■□□□ 1.98
CXXC1-215ENST00000591190 SHROOM2Q13796 1616 aa27.41■■□□□ 1.98
CXXC1-215ENST00000591190 CUL7Q14999 1698 aa27.4■■□□□ 1.98
CXXC1-215ENST00000591190 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
CXXC1-215ENST00000591190 RUSC2Q8N2Y8 1516 aa27.36■■□□□ 1.97
CXXC1-215ENST00000591190 ERCC6L2Q5T890 1561 aa27.35■■□□□ 1.97
CXXC1-215ENST00000591190 IGF1RP08069 1367 aa27.28■■□□□ 1.96
CXXC1-215ENST00000591190 PRG4Q92954 1404 aaPredicted RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms