RNA–Protein interactions for RNA: ENST00000590873.5

FAM20A-204, Transcript of FAM20A, golgi associated secretory pathway pseudokinase, humanhuman

TSL 3

Gene FAM20A, Length 804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20A-204ENST00000590873 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.25
FAM20A-204ENST00000590873 ABCC9O60706 1549 aa20.63■□□□□ 0.89
FAM20A-204ENST00000590873 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
FAM20A-204ENST00000590873 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
FAM20A-204ENST00000590873 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
FAM20A-204ENST00000590873 NACADO15069 1562 aa19.43■□□□□ 0.7
FAM20A-204ENST00000590873 DNAJC5BQ9UF47 199 aa19.32■□□□□ 0.68
FAM20A-204ENST00000590873 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
FAM20A-204ENST00000590873 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
FAM20A-204ENST00000590873 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
FAM20A-204ENST00000590873 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
FAM20A-204ENST00000590873 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
FAM20A-204ENST00000590873 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
FAM20A-204ENST00000590873 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
FAM20A-204ENST00000590873 SHROOM4Q9ULL8 1493 aa18.73■□□□□ 0.59
FAM20A-204ENST00000590873 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
FAM20A-204ENST00000590873 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
FAM20A-204ENST00000590873 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
FAM20A-204ENST00000590873 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
FAM20A-204ENST00000590873 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
FAM20A-204ENST00000590873 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
FAM20A-204ENST00000590873 ERCC6Q03468 1493 aa17.89■□□□□ 0.45
FAM20A-204ENST00000590873 ATAD2BQ9ULI0 1458 aa17.86■□□□□ 0.45
FAM20A-204ENST00000590873 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
FAM20A-204ENST00000590873 SMARCA4P51532 1647 aa17.84■□□□□ 0.45
FAM20A-204ENST00000590873 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
FAM20A-204ENST00000590873 CUX2O14529 1486 aa17.8■□□□□ 0.44
FAM20A-204ENST00000590873 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
FAM20A-204ENST00000590873 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
FAM20A-204ENST00000590873 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
FAM20A-204ENST00000590873 NESP48681 1621 aa17.68■□□□□ 0.42
FAM20A-204ENST00000590873 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
FAM20A-204ENST00000590873 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
FAM20A-204ENST00000590873 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
FAM20A-204ENST00000590873 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
FAM20A-204ENST00000590873 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
FAM20A-204ENST00000590873 KIF21AQ7Z4S6 1674 aa17.47■□□□□ 0.39
FAM20A-204ENST00000590873 WIZO95785 1651 aa17.41■□□□□ 0.38
FAM20A-204ENST00000590873 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
FAM20A-204ENST00000590873 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
FAM20A-204ENST00000590873 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
FAM20A-204ENST00000590873 WDR62O43379 1518 aa17.25■□□□□ 0.35
FAM20A-204ENST00000590873 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
FAM20A-204ENST00000590873 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
FAM20A-204ENST00000590873 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
FAM20A-204ENST00000590873 CFTRP13569 1480 aa17.16■□□□□ 0.34
FAM20A-204ENST00000590873 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
FAM20A-204ENST00000590873 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
FAM20A-204ENST00000590873 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
FAM20A-204ENST00000590873 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
FAM20A-204ENST00000590873 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
FAM20A-204ENST00000590873 IFT140Q96RY7 1462 aa16.9■□□□□ 0.3
FAM20A-204ENST00000590873 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
FAM20A-204ENST00000590873 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
FAM20A-204ENST00000590873 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
FAM20A-204ENST00000590873 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
FAM20A-204ENST00000590873 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
FAM20A-204ENST00000590873 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.27
FAM20A-204ENST00000590873 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.27
FAM20A-204ENST00000590873 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.27
FAM20A-204ENST00000590873 FBLN2P98095 1184 aa16.73■□□□□ 0.27
FAM20A-204ENST00000590873 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.276e-7■■■■■ 29.4
FAM20A-204ENST00000590873 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
FAM20A-204ENST00000590873 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
FAM20A-204ENST00000590873 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
FAM20A-204ENST00000590873 CHD1O14646 1710 aa16.68■□□□□ 0.26
FAM20A-204ENST00000590873 SOGA1O94964 1423 aa16.65■□□□□ 0.26
FAM20A-204ENST00000590873 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
FAM20A-204ENST00000590873 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
FAM20A-204ENST00000590873 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
FAM20A-204ENST00000590873 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
FAM20A-204ENST00000590873 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
FAM20A-204ENST00000590873 SNAPC4Q5SXM2 1469 aa16.56■□□□□ 0.24
FAM20A-204ENST00000590873 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
FAM20A-204ENST00000590873 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
FAM20A-204ENST00000590873 CUX1P39880 1505 aa16.54■□□□□ 0.24
FAM20A-204ENST00000590873 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
FAM20A-204ENST00000590873 ARAP1Q96P48 1450 aa16.51■□□□□ 0.23
FAM20A-204ENST00000590873 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
FAM20A-204ENST00000590873 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
FAM20A-204ENST00000590873 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
FAM20A-204ENST00000590873 MAGI1Q96QZ7 1491 aaPredicted RBP16.5■□□□□ 0.23
FAM20A-204ENST00000590873 PBRM1Q86U86 1689 aa16.45■□□□□ 0.22
FAM20A-204ENST00000590873 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
FAM20A-204ENST00000590873 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
FAM20A-204ENST00000590873 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
FAM20A-204ENST00000590873 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
FAM20A-204ENST00000590873 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
FAM20A-204ENST00000590873 WRNQ14191 1432 aaPredicted RBP eCLIP16.35■□□□□ 0.21
FAM20A-204ENST00000590873 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
FAM20A-204ENST00000590873 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
FAM20A-204ENST00000590873 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.2
FAM20A-204ENST00000590873 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
FAM20A-204ENST00000590873 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
FAM20A-204ENST00000590873 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
FAM20A-204ENST00000590873 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
FAM20A-204ENST00000590873 NUP160Q12769 1436 aa16.19■□□□□ 0.18
FAM20A-204ENST00000590873 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
FAM20A-204ENST00000590873 SHROOM2Q13796 1616 aa16.12■□□□□ 0.17
FAM20A-204ENST00000590873 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms