RNA–Protein interactions for RNA: ENST00000590812.5

TRMT1-214, Transcript of tRNA methyltransferase 1, humanhuman

TSL 4

Gene TRMT1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-214ENST00000590812 NISCHQ9Y2I1 1504 aa38.53■■■■□ 3.76
TRMT1-214ENST00000590812 ABCC9O60706 1549 aa35.47■■■■□ 3.27
TRMT1-214ENST00000590812 CCDC180Q9P1Z9 1646 aa34.81■■■■□ 3.16
TRMT1-214ENST00000590812 DNAJC5BQ9UF47 199 aa33.86■■■■□ 3.01
TRMT1-214ENST00000590812 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
TRMT1-214ENST00000590812 NACADO15069 1562 aa33.13■■■□□ 2.89
TRMT1-214ENST00000590812 PABPN1Q86U42 306 aaKnown RBP eCLIP32.97■■■□□ 2.87
TRMT1-214ENST00000590812 DCAF8L2P0C7V8 631 aa32.92■■■□□ 2.86
TRMT1-214ENST00000590812 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.81
TRMT1-214ENST00000590812 MYO15BQ96JP2 1530 aa32.49■■■□□ 2.79
TRMT1-214ENST00000590812 BICRAQ9NZM4 1560 aa32.47■■■□□ 2.79
TRMT1-214ENST00000590812 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
TRMT1-214ENST00000590812 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
TRMT1-214ENST00000590812 CC2D2AQ9P2K1 1620 aa31.98■■■□□ 2.71
TRMT1-214ENST00000590812 DCAF1Q9Y4B6 1507 aa31.81■■■□□ 2.68
TRMT1-214ENST00000590812 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
TRMT1-214ENST00000590812 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
TRMT1-214ENST00000590812 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
TRMT1-214ENST00000590812 DNAJC5Q9H3Z4 198 aa31.65■■■□□ 2.66
TRMT1-214ENST00000590812 CUX2O14529 1486 aa30.89■■■□□ 2.54
TRMT1-214ENST00000590812 ERCC6Q03468 1493 aa30.73■■■□□ 2.51
TRMT1-214ENST00000590812 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
TRMT1-214ENST00000590812 ATAD2BQ9ULI0 1458 aa30.4■■■□□ 2.46
TRMT1-214ENST00000590812 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
TRMT1-214ENST00000590812 HMGXB3Q12766 1538 aa30.28■■■□□ 2.44
TRMT1-214ENST00000590812 NESP48681 1621 aa30.25■■■□□ 2.43
TRMT1-214ENST00000590812 SMARCA4P51532 1647 aa30.15■■■□□ 2.42
TRMT1-214ENST00000590812 BAZ1BQ9UIG0 1483 aaKnown RBP30.08■■■□□ 2.41
TRMT1-214ENST00000590812 THOC2Q8NI27 1593 aaKnown RBP30.05■■■□□ 2.4
TRMT1-214ENST00000590812 LAMC3Q9Y6N6 1575 aa29.99■■■□□ 2.39
TRMT1-214ENST00000590812 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
TRMT1-214ENST00000590812 BAZ1AQ9NRL2 1556 aaPredicted RBP29.96■■■□□ 2.39
TRMT1-214ENST00000590812 PDS5BQ9NTI5 1447 aa29.92■■■□□ 2.38
TRMT1-214ENST00000590812 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
TRMT1-214ENST00000590812 KIF21AQ7Z4S6 1674 aa29.79■■■□□ 2.36
TRMT1-214ENST00000590812 CADPSQ9ULU8 1353 aa29.68■■■□□ 2.34
TRMT1-214ENST00000590812 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.34
TRMT1-214ENST00000590812 MRC2Q9UBG0 1479 aa29.63■■■□□ 2.33
TRMT1-214ENST00000590812 WDR62O43379 1518 aa29.55■■■□□ 2.32
TRMT1-214ENST00000590812 OSCARQ8IYS5 282 aa29.46■■■□□ 2.31
TRMT1-214ENST00000590812 CEP164Q9UPV0 1460 aa29.4■■■□□ 2.3
TRMT1-214ENST00000590812 FANCD2Q9BXW9 1451 aa29.29■■■□□ 2.28
TRMT1-214ENST00000590812 WIZO95785 1651 aa29.22■■■□□ 2.27
TRMT1-214ENST00000590812 CFTRP13569 1480 aa29.17■■■□□ 2.26
TRMT1-214ENST00000590812 URB2Q14146 1524 aaKnown RBP29.05■■■□□ 2.24
TRMT1-214ENST00000590812 RIMBP3CA6NJZ7 1639 aa28.97■■■□□ 2.23
TRMT1-214ENST00000590812 RIMBP3BA6NNM3 1639 aa28.97■■■□□ 2.23
TRMT1-214ENST00000590812 RIMBP3Q9UFD9 1639 aa28.97■■■□□ 2.23
TRMT1-214ENST00000590812 TOP2AP11388 1531 aaKnown RBP28.86■■■□□ 2.21
TRMT1-214ENST00000590812 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
TRMT1-214ENST00000590812 ARHGEF11O15085 1522 aa28.85■■■□□ 2.21
TRMT1-214ENST00000590812 RSF1Q96T23 1441 aaPredicted RBP28.85■■■□□ 2.21
TRMT1-214ENST00000590812 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
TRMT1-214ENST00000590812 CYB5RLQ6IPT4 315 aa28.78■■■□□ 2.2
TRMT1-214ENST00000590812 TRHP20396 242 aaPredicted RBP28.69■■■□□ 2.18
TRMT1-214ENST00000590812 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
TRMT1-214ENST00000590812 TOPBP1Q92547 1522 aa28.65■■■□□ 2.18
TRMT1-214ENST00000590812 ABCC8Q09428 1581 aa28.64■■■□□ 2.18
TRMT1-214ENST00000590812 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
TRMT1-214ENST00000590812 EIF4G3O43432 1585 aaKnown RBP28.57■■■□□ 2.16
TRMT1-214ENST00000590812 FBLN2P98095 1184 aa28.52■■■□□ 2.16
TRMT1-214ENST00000590812 ARAP1Q96P48 1450 aa28.52■■■□□ 2.16
TRMT1-214ENST00000590812 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.151e-6■■■■■ 33.8
TRMT1-214ENST00000590812 DNMBPQ6XZF7 1577 aa28.48■■■□□ 2.15
TRMT1-214ENST00000590812 CHD1O14646 1710 aa28.44■■■□□ 2.14
TRMT1-214ENST00000590812 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
TRMT1-214ENST00000590812 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
TRMT1-214ENST00000590812 POLA1P09884 1462 aaPredicted RBP28.32■■■□□ 2.12
TRMT1-214ENST00000590812 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
TRMT1-214ENST00000590812 CHMP7Q8WUX9 453 aaPredicted RBP28.24■■■□□ 2.11
TRMT1-214ENST00000590812 SOGA1O94964 1423 aa28.24■■■□□ 2.11
TRMT1-214ENST00000590812 RAD54L2Q9Y4B4 1467 aa28.22■■■□□ 2.11
TRMT1-214ENST00000590812 SNAPC4Q5SXM2 1469 aa28.17■■■□□ 2.1
TRMT1-214ENST00000590812 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
TRMT1-214ENST00000590812 SYNJ1O43426 1573 aa28.15■■■□□ 2.1
TRMT1-214ENST00000590812 WDR97A6NE52 1622 aa28.14■■■□□ 2.09
TRMT1-214ENST00000590812 MAGI1Q96QZ7 1491 aaPredicted RBP28.11■■■□□ 2.09
TRMT1-214ENST00000590812 GRIN2BQ13224 1484 aa28.05■■■□□ 2.08
TRMT1-214ENST00000590812 FGD5Q6ZNL6 1462 aa28.04■■■□□ 2.08
TRMT1-214ENST00000590812 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
TRMT1-214ENST00000590812 GAPVD1Q14C86 1478 aa27.97■■■□□ 2.07
TRMT1-214ENST00000590812 CUX1P39880 1505 aa27.89■■■□□ 2.06
TRMT1-214ENST00000590812 PBRM1Q86U86 1689 aa27.76■■■□□ 2.03
TRMT1-214ENST00000590812 ABCA10Q8WWZ4 1543 aa27.72■■■□□ 2.03
TRMT1-214ENST00000590812 GRIN2AQ12879 1464 aa27.66■■■□□ 2.02
TRMT1-214ENST00000590812 ABCA5Q8WWZ7 1642 aa27.66■■■□□ 2.02
TRMT1-214ENST00000590812 ERCC6L2Q5T890 1561 aa27.64■■■□□ 2.01
TRMT1-214ENST00000590812 NUP160Q12769 1436 aa27.6■■■□□ 2.01
TRMT1-214ENST00000590812 CEP170Q5SW79 1584 aa27.6■■■□□ 2.01
TRMT1-214ENST00000590812 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
TRMT1-214ENST00000590812 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
TRMT1-214ENST00000590812 ADAMTS12P58397 1594 aa27.5■■□□□ 1.99
TRMT1-214ENST00000590812 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
TRMT1-214ENST00000590812 KIF13AQ9H1H9 1805 aa27.42■■□□□ 1.98
TRMT1-214ENST00000590812 NPM1P06748 294 aaKnown RBP eCLIP27.41■■□□□ 1.98
TRMT1-214ENST00000590812 FAM69CQ0P6D2 419 aa27.41■■□□□ 1.98
TRMT1-214ENST00000590812 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
TRMT1-214ENST00000590812 JPH4Q96JJ6 628 aa27.4■■□□□ 1.98
TRMT1-214ENST00000590812 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
TRMT1-214ENST00000590812 ABCC10Q5T3U5 1492 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms