RNA–Protein interactions for RNA: ENST00000590595.1

SEPT9-231, Transcript of septin 9, human

TSL 3

Gene SEPT9, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-231	ENST00000590595	NISCH	Q9Y2I1	1504 aa		40.71	■■■■■ 4.11
SEPT9-231	ENST00000590595	CCDC180	Q9P1Z9	1646 aa		36.52	■■■■□ 3.44
SEPT9-231	ENST00000590595	ABCC9	O60706	1549 aa		35.76	■■■■□ 3.31
SEPT9-231	ENST00000590595	RB1CC1	Q8TDY2	1594 aa		34.37	■■■■□ 3.09
SEPT9-231	ENST00000590595	NACAD	O15069	1562 aa		34.31	■■■■□ 3.08
SEPT9-231	ENST00000590595	MYO15B	Q96JP2	1530 aa		34.15	■■■■□ 3.06
SEPT9-231	ENST00000590595	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.9	■■■■□ 3.02
SEPT9-231	ENST00000590595	DCAF1	Q9Y4B6	1507 aa		33.83	■■■■□ 3.01
SEPT9-231	ENST00000590595	UNC13A	Q9UPW8	1703 aa		33.81	■■■■□ 3
SEPT9-231	ENST00000590595	BICRA	Q9NZM4	1560 aa		33.54	■■■□□ 2.96
SEPT9-231	ENST00000590595	DCAF8L2	P0C7V8	631 aa		33.48	■■■□□ 2.95
SEPT9-231	ENST00000590595	DNAJC5B	Q9UF47	199 aa		33.24	■■■□□ 2.91
SEPT9-231	ENST00000590595	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.19	■■■□□ 2.9
SEPT9-231	ENST00000590595	SHROOM4	Q9ULL8	1493 aa		33.18	■■■□□ 2.9
SEPT9-231	ENST00000590595	SCRIB	Q14160	1630 aa		33.02	■■■□□ 2.88
SEPT9-231	ENST00000590595	EIF4G1	Q04637	1599 aa	Known RBP	32.56	■■■□□ 2.8
SEPT9-231	ENST00000590595	CC2D2A	Q9P2K1	1620 aa		32.49	■■■□□ 2.79
SEPT9-231	ENST00000590595	CECR2	Q9BXF3	1484 aa		32.23	■■■□□ 2.75
SEPT9-231	ENST00000590595	SMARCA4	P51532	1647 aa		31.71	■■■□□ 2.67
SEPT9-231	ENST00000590595	NCAPD3	P42695	1498 aa		31.66	■■■□□ 2.66
SEPT9-231	ENST00000590595	ATAD2B	Q9ULI0	1458 aa		31.58	■■■□□ 2.65
SEPT9-231	ENST00000590595	PEG3	Q9GZU2	1588 aa		31.56	■■■□□ 2.64
SEPT9-231	ENST00000590595	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.55	■■■□□ 2.64
SEPT9-231	ENST00000590595	HMGXB3	Q12766	1538 aa		31.54	■■■□□ 2.64
SEPT9-231	ENST00000590595	SMARCA2	P51531	1590 aa		31.51	■■■□□ 2.63
SEPT9-231	ENST00000590595	MROH2B	Q7Z745	1585 aa		31.34	■■■□□ 2.61
SEPT9-231	ENST00000590595	BAZ1B	Q9UIG0	1483 aa	Known RBP	31.19	■■■□□ 2.58
SEPT9-231	ENST00000590595	WIZ	O95785	1651 aa		30.96	■■■□□ 2.55
SEPT9-231	ENST00000590595	NES	P48681	1621 aa		30.91	■■■□□ 2.54
SEPT9-231	ENST00000590595	LAMC3	Q9Y6N6	1575 aa		30.88	■■■□□ 2.53
SEPT9-231	ENST00000590595	CUX2	O14529	1486 aa		30.84	■■■□□ 2.53
SEPT9-231	ENST00000590595	RSF1	Q96T23	1441 aa	Predicted RBP	30.81	■■■□□ 2.52
SEPT9-231	ENST00000590595	ERCC6	Q03468	1493 aa		30.76	■■■□□ 2.51
SEPT9-231	ENST00000590595	THOC2	Q8NI27	1593 aa	Known RBP	30.75	■■■□□ 2.51
SEPT9-231	ENST00000590595	TOP2A	P11388	1531 aa	Known RBP	30.66	■■■□□ 2.5
SEPT9-231	ENST00000590595	KIF21A	Q7Z4S6	1674 aa		30.65	■■■□□ 2.5
SEPT9-231	ENST00000590595	CADPS	Q9ULU8	1353 aa		30.59	■■■□□ 2.49
SEPT9-231	ENST00000590595	PDS5B	Q9NTI5	1447 aa		30.52	■■■□□ 2.48
SEPT9-231	ENST00000590595	CFTR	P13569	1480 aa		30.44	■■■□□ 2.46
SEPT9-231	ENST00000590595	WDR62	O43379	1518 aa		30.37	■■■□□ 2.45
SEPT9-231	ENST00000590595	PRDM2	Q13029	1718 aa		30.33	■■■□□ 2.45
SEPT9-231	ENST00000590595	MRC2	Q9UBG0	1479 aa		30.32	■■■□□ 2.44
SEPT9-231	ENST00000590595	FANCD2	Q9BXW9	1451 aa		30.24	■■■□□ 2.43
SEPT9-231	ENST00000590595	CEP164	Q9UPV0	1460 aa		30.23	■■■□□ 2.43
SEPT9-231	ENST00000590595	DNAJC5	Q9H3Z4	198 aa		30.21	■■■□□ 2.43
SEPT9-231	ENST00000590595	CCDC88B	A6NC98	1476 aa		30.2	■■■□□ 2.43
SEPT9-231	ENST00000590595	URB2	Q14146	1524 aa	Known RBP	30.06	■■■□□ 2.4
SEPT9-231	ENST00000590595	TOPBP1	Q92547	1522 aa		29.77	■■■□□ 2.36
SEPT9-231	ENST00000590595	DNMBP	Q6XZF7	1577 aa		29.74	■■■□□ 2.35
SEPT9-231	ENST00000590595	ABCC8	Q09428	1581 aa		29.7	■■■□□ 2.35
SEPT9-231	ENST00000590595	IFT140	Q96RY7	1462 aa		29.65	■■■□□ 2.34
SEPT9-231	ENST00000590595	TARBP1	Q13395	1621 aa	Known RBP	29.61	■■■□□ 2.33
SEPT9-231	ENST00000590595	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.55	■■■□□ 2.32
SEPT9-231	ENST00000590595	POLA1	P09884	1462 aa	Predicted RBP	29.51	■■■□□ 2.31
SEPT9-231	ENST00000590595	EIF4G3	O43432	1585 aa	Known RBP	29.5	■■■□□ 2.31
SEPT9-231	ENST00000590595	CUX1	P39880	1505 aa		29.44	■■■□□ 2.3
SEPT9-231	ENST00000590595	WDR97	A6NE52	1622 aa		29.38	■■■□□ 2.29
SEPT9-231	ENST00000590595	FGD5	Q6ZNL6	1462 aa		29.32	■■■□□ 2.28
SEPT9-231	ENST00000590595	RAD54L2	Q9Y4B4	1467 aa		29.27	■■■□□ 2.28
SEPT9-231	ENST00000590595	AQR	O60306	1485 aa	Known RBP eCLIP	29.24	■■■□□ 2.27
SEPT9-231	ENST00000590595	SUPT5H	O00267	1087 aa	Known RBP	29.23	■■■□□ 2.27
SEPT9-231	ENST00000590595	SOGA1	O94964	1423 aa		29.2	■■■□□ 2.27
SEPT9-231	ENST00000590595	CHD1	O14646	1710 aa		29.2	■■■□□ 2.27
SEPT9-231	ENST00000590595	OSCAR	Q8IYS5	282 aa		29.19	■■■□□ 2.26
SEPT9-231	ENST00000590595	BIVM-ERCC5	R4GMW8	1640 aa		29.16	■■■□□ 2.26
SEPT9-231	ENST00000590595	ABCA5	Q8WWZ7	1642 aa		29.12	■■■□□ 2.25
SEPT9-231	ENST00000590595	TOP2B	Q02880	1626 aa		29.11	■■■□□ 2.25
SEPT9-231	ENST00000590595	ABCA10	Q8WWZ4	1543 aa		29.1	■■■□□ 2.25
SEPT9-231	ENST00000590595	TDRD9	Q8NDG6	1382 aa	Known RBP	29.06	■■■□□ 2.24
SEPT9-231	ENST00000590595	SYNJ1	O43426	1573 aa		29.05	■■■□□ 2.24
SEPT9-231	ENST00000590595	PBRM1	Q86U86	1689 aa		29.05	■■■□□ 2.24
SEPT9-231	ENST00000590595	MAGI1	Q96QZ7	1491 aa	Predicted RBP	29.04	■■■□□ 2.24
SEPT9-231	ENST00000590595	RIMBP3C	A6NJZ7	1639 aa		29.04	■■■□□ 2.24
SEPT9-231	ENST00000590595	RIMBP3B	A6NNM3	1639 aa		29.04	■■■□□ 2.24
SEPT9-231	ENST00000590595	RIMBP3	Q9UFD9	1639 aa		29.04	■■■□□ 2.24
SEPT9-231	ENST00000590595	SNAPC4	Q5SXM2	1469 aa		29.02	■■■□□ 2.24
SEPT9-231	ENST00000590595	GRIN2B	Q13224	1484 aa		29.01	■■■□□ 2.23
SEPT9-231	ENST00000590595	ARHGEF11	O15085	1522 aa		28.98	■■■□□ 2.23
SEPT9-231	ENST00000590595	CLASP1	Q7Z460	1538 aa		28.97	■■■□□ 2.23
SEPT9-231	ENST00000590595	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.96	■■■□□ 2.23
SEPT9-231	ENST00000590595	GAPVD1	Q14C86	1478 aa		28.94	■■■□□ 2.22
SEPT9-231	ENST00000590595	SYNJ2	O15056	1496 aa		28.91	■■■□□ 2.22
SEPT9-231	ENST00000590595	ADAMTS12	P58397	1594 aa		28.81	■■■□□ 2.2
SEPT9-231	ENST00000590595	ARAP1	Q96P48	1450 aa		28.75	■■■□□ 2.19
SEPT9-231	ENST00000590595	ERICH3	Q5RHP9	1530 aa		28.74	■■■□□ 2.19
SEPT9-231	ENST00000590595	TRIM41	Q8WV44	630 aa		28.7	■■■□□ 2.18
SEPT9-231	ENST00000590595	GRIN2A	Q12879	1464 aa		28.68	■■■□□ 2.18
SEPT9-231	ENST00000590595	NUP160	Q12769	1436 aa		28.66	■■■□□ 2.18
SEPT9-231	ENST00000590595	CEP170	Q5SW79	1584 aa		28.62	■■■□□ 2.17
SEPT9-231	ENST00000590595	FBLN2	P98095	1184 aa		28.61	■■■□□ 2.17
SEPT9-231	ENST00000590595	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.61	■■■□□ 2.17
SEPT9-231	ENST00000590595	FHAD1	B1AJZ9	1412 aa		28.6	■■■□□ 2.17
SEPT9-231	ENST00000590595	SHROOM2	Q13796	1616 aa		28.58	■■■□□ 2.17
SEPT9-231	ENST00000590595	ERCC6L2	Q5T890	1561 aa		28.44	■■■□□ 2.14
SEPT9-231	ENST00000590595	RUSC2	Q8N2Y8	1516 aa		28.42	■■■□□ 2.14
SEPT9-231	ENST00000590595	CUL7	Q14999	1698 aa		28.41	■■■□□ 2.14
SEPT9-231	ENST00000590595	CYB5RL	Q6IPT4	315 aa		28.39	■■■□□ 2.14
SEPT9-231	ENST00000590595	IGF1R	P08069	1367 aa		28.35	■■■□□ 2.13
SEPT9-231	ENST00000590595	KIF27	Q86VH2	1401 aa		28.35	■■■□□ 2.13
SEPT9-231	ENST00000590595	KIAA0586	Q9BVV6	1533 aa		28.18	■■■□□ 2.1

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