RNA–Protein interactions for RNA: ENST00000590342.1

DUSP3-202, Transcript of dual specificity phosphatase 3, humanhuman

TSL 1 (best)

Gene DUSP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP3-202ENST00000590342 NISCHQ9Y2I1 1504 aa32.42■■■□□ 2.78
DUSP3-202ENST00000590342 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
DUSP3-202ENST00000590342 ABCC9O60706 1549 aa27.3■■□□□ 1.96
DUSP3-202ENST00000590342 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.94
DUSP3-202ENST00000590342 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
DUSP3-202ENST00000590342 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
DUSP3-202ENST00000590342 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
DUSP3-202ENST00000590342 NACADO15069 1562 aa26.62■■□□□ 1.85
DUSP3-202ENST00000590342 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
DUSP3-202ENST00000590342 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
DUSP3-202ENST00000590342 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
DUSP3-202ENST00000590342 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
DUSP3-202ENST00000590342 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
DUSP3-202ENST00000590342 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
DUSP3-202ENST00000590342 CECR2Q9BXF3 1484 aa25.22■■□□□ 1.63
DUSP3-202ENST00000590342 BAZ1AQ9NRL2 1556 aaPredicted RBP25.07■■□□□ 1.6
DUSP3-202ENST00000590342 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
DUSP3-202ENST00000590342 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
DUSP3-202ENST00000590342 RSF1Q96T23 1441 aaPredicted RBP24.98■■□□□ 1.59
DUSP3-202ENST00000590342 EIF4G1Q04637 1599 aaKnown RBP24.96■■□□□ 1.59
DUSP3-202ENST00000590342 SUPT5HO00267 1087 aaKnown RBP24.96■■□□□ 1.59
DUSP3-202ENST00000590342 WIZO95785 1651 aa24.79■■□□□ 1.56
DUSP3-202ENST00000590342 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
DUSP3-202ENST00000590342 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
DUSP3-202ENST00000590342 CC2D2AQ9P2K1 1620 aa24.7■■□□□ 1.54
DUSP3-202ENST00000590342 SMARCA2P51531 1590 aa24.69■■□□□ 1.54
DUSP3-202ENST00000590342 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
DUSP3-202ENST00000590342 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
DUSP3-202ENST00000590342 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
DUSP3-202ENST00000590342 HMGXB3Q12766 1538 aa24.5■■□□□ 1.51
DUSP3-202ENST00000590342 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
DUSP3-202ENST00000590342 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
DUSP3-202ENST00000590342 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
DUSP3-202ENST00000590342 CFTRP13569 1480 aa23.91■■□□□ 1.42
DUSP3-202ENST00000590342 NESP48681 1621 aa23.84■■□□□ 1.41
DUSP3-202ENST00000590342 LAMC3Q9Y6N6 1575 aa23.81■■□□□ 1.4
DUSP3-202ENST00000590342 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
DUSP3-202ENST00000590342 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
DUSP3-202ENST00000590342 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
DUSP3-202ENST00000590342 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
DUSP3-202ENST00000590342 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
DUSP3-202ENST00000590342 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
DUSP3-202ENST00000590342 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
DUSP3-202ENST00000590342 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
DUSP3-202ENST00000590342 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
DUSP3-202ENST00000590342 ERCC6Q03468 1493 aa23.47■■□□□ 1.35
DUSP3-202ENST00000590342 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
DUSP3-202ENST00000590342 CUX1P39880 1505 aa23.43■■□□□ 1.34
DUSP3-202ENST00000590342 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
DUSP3-202ENST00000590342 URB2Q14146 1524 aaKnown RBP23.37■■□□□ 1.33
DUSP3-202ENST00000590342 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
DUSP3-202ENST00000590342 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
DUSP3-202ENST00000590342 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
DUSP3-202ENST00000590342 TOPBP1Q92547 1522 aa23.34■■□□□ 1.33
DUSP3-202ENST00000590342 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
DUSP3-202ENST00000590342 WDR62O43379 1518 aa23.25■■□□□ 1.31
DUSP3-202ENST00000590342 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
DUSP3-202ENST00000590342 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.3
DUSP3-202ENST00000590342 SOGA1O94964 1423 aa23.12■■□□□ 1.29
DUSP3-202ENST00000590342 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
DUSP3-202ENST00000590342 CUX2O14529 1486 aa23.07■■□□□ 1.28
DUSP3-202ENST00000590342 FAM9AQ8IZU1 332 aaPredicted RBP23.05■■□□□ 1.28
DUSP3-202ENST00000590342 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
DUSP3-202ENST00000590342 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
DUSP3-202ENST00000590342 TARBP1Q13395 1621 aaKnown RBP23.02■■□□□ 1.28
DUSP3-202ENST00000590342 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
DUSP3-202ENST00000590342 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
DUSP3-202ENST00000590342 WDR97A6NE52 1622 aa22.98■■□□□ 1.27
DUSP3-202ENST00000590342 EEA1Q15075 1411 aa22.98■■□□□ 1.27
DUSP3-202ENST00000590342 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
DUSP3-202ENST00000590342 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.26
DUSP3-202ENST00000590342 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
DUSP3-202ENST00000590342 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
DUSP3-202ENST00000590342 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
DUSP3-202ENST00000590342 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
DUSP3-202ENST00000590342 IGF1RP08069 1367 aa22.82■■□□□ 1.24
DUSP3-202ENST00000590342 EIF4G3O43432 1585 aaKnown RBP22.81■■□□□ 1.24
DUSP3-202ENST00000590342 ERICH3Q5RHP9 1530 aa22.76■■□□□ 1.23
DUSP3-202ENST00000590342 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
DUSP3-202ENST00000590342 GRIN2BQ13224 1484 aa22.75■■□□□ 1.23
DUSP3-202ENST00000590342 EHMT2Q96KQ7 1210 aa22.75■■□□□ 1.23
DUSP3-202ENST00000590342 LOC105371045A0A1W2PR82 267 aa22.73■■□□□ 1.23
DUSP3-202ENST00000590342 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
DUSP3-202ENST00000590342 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
DUSP3-202ENST00000590342 KIF21BO75037 1637 aa22.69■■□□□ 1.22
DUSP3-202ENST00000590342 CUL7Q14999 1698 aa22.68■■□□□ 1.22
DUSP3-202ENST00000590342 RAPGEF2Q9Y4G8 1499 aa22.65■■□□□ 1.22
DUSP3-202ENST00000590342 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.22
DUSP3-202ENST00000590342 GOLGA3Q08378 1498 aa22.64■■□□□ 1.21
DUSP3-202ENST00000590342 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
DUSP3-202ENST00000590342 FHAD1B1AJZ9 1412 aa22.61■■□□□ 1.21
DUSP3-202ENST00000590342 MAGI1Q96QZ7 1491 aaPredicted RBP22.61■■□□□ 1.21
DUSP3-202ENST00000590342 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.2
DUSP3-202ENST00000590342 SYNJ2O15056 1496 aa22.52■■□□□ 1.2
DUSP3-202ENST00000590342 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
DUSP3-202ENST00000590342 FBLN2P98095 1184 aa22.5■■□□□ 1.19
DUSP3-202ENST00000590342 TNIKQ9UKE5 1360 aa22.48■■□□□ 1.19
DUSP3-202ENST00000590342 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
DUSP3-202ENST00000590342 CHD1O14646 1710 aa22.39■■□□□ 1.17
DUSP3-202ENST00000590342 CTTNBP2Q8WZ74 1663 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms