RNA–Protein interactions for RNA: ENST00000590262.1

SAFB2-206, Transcript of scaffold attachment factor B2, humanhuman

TSL 4

Gene SAFB2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-206ENST00000590262 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
SAFB2-206ENST00000590262 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
SAFB2-206ENST00000590262 ABCC9O60706 1549 aa18.09■□□□□ 0.49
SAFB2-206ENST00000590262 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
SAFB2-206ENST00000590262 DCAF8L2P0C7V8 631 aa17.64■□□□□ 0.41
SAFB2-206ENST00000590262 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
SAFB2-206ENST00000590262 NACADO15069 1562 aa17.62■□□□□ 0.41
SAFB2-206ENST00000590262 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
SAFB2-206ENST00000590262 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
SAFB2-206ENST00000590262 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
SAFB2-206ENST00000590262 SCRIBQ14160 1630 aa17.3■□□□□ 0.36
SAFB2-206ENST00000590262 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
SAFB2-206ENST00000590262 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
SAFB2-206ENST00000590262 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
SAFB2-206ENST00000590262 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
SAFB2-206ENST00000590262 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
SAFB2-206ENST00000590262 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
SAFB2-206ENST00000590262 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
SAFB2-206ENST00000590262 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
SAFB2-206ENST00000590262 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
SAFB2-206ENST00000590262 WIZO95785 1651 aa16.38■□□□□ 0.21
SAFB2-206ENST00000590262 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
SAFB2-206ENST00000590262 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
SAFB2-206ENST00000590262 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
SAFB2-206ENST00000590262 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
SAFB2-206ENST00000590262 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
SAFB2-206ENST00000590262 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
SAFB2-206ENST00000590262 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
SAFB2-206ENST00000590262 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
SAFB2-206ENST00000590262 NCAPD3P42695 1498 aa16.14■□□□□ 0.17
SAFB2-206ENST00000590262 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
SAFB2-206ENST00000590262 PRDM2Q13029 1718 aa15.96■□□□□ 0.15
SAFB2-206ENST00000590262 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
SAFB2-206ENST00000590262 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
SAFB2-206ENST00000590262 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
SAFB2-206ENST00000590262 NESP48681 1621 aa15.75■□□□□ 0.11
SAFB2-206ENST00000590262 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
SAFB2-206ENST00000590262 CFTRP13569 1480 aa15.7■□□□□ 0.1
SAFB2-206ENST00000590262 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
SAFB2-206ENST00000590262 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
SAFB2-206ENST00000590262 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
SAFB2-206ENST00000590262 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
SAFB2-206ENST00000590262 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
SAFB2-206ENST00000590262 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
SAFB2-206ENST00000590262 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.07
SAFB2-206ENST00000590262 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.07
SAFB2-206ENST00000590262 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
SAFB2-206ENST00000590262 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
SAFB2-206ENST00000590262 TOP2BQ02880 1626 aa15.42■□□□□ 0.06
SAFB2-206ENST00000590262 WDR62O43379 1518 aa15.42■□□□□ 0.06
SAFB2-206ENST00000590262 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
SAFB2-206ENST00000590262 CUX1P39880 1505 aa15.41■□□□□ 0.06
SAFB2-206ENST00000590262 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
SAFB2-206ENST00000590262 TOPBP1Q92547 1522 aa15.39■□□□□ 0.05
SAFB2-206ENST00000590262 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
SAFB2-206ENST00000590262 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
SAFB2-206ENST00000590262 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.04
SAFB2-206ENST00000590262 CUX2O14529 1486 aa15.26■□□□□ 0.03
SAFB2-206ENST00000590262 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
SAFB2-206ENST00000590262 TARBP1Q13395 1621 aaKnown RBP15.25■□□□□ 0.03
SAFB2-206ENST00000590262 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
SAFB2-206ENST00000590262 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
SAFB2-206ENST00000590262 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
SAFB2-206ENST00000590262 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
SAFB2-206ENST00000590262 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
SAFB2-206ENST00000590262 SOGA1O94964 1423 aa15.17■□□□□ 0.02
SAFB2-206ENST00000590262 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
SAFB2-206ENST00000590262 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
SAFB2-206ENST00000590262 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
SAFB2-206ENST00000590262 KIF27Q86VH2 1401 aa15.06■□□□□ 0
SAFB2-206ENST00000590262 GAPVD1Q14C86 1478 aa15.05■□□□□ -0
SAFB2-206ENST00000590262 CUL7Q14999 1698 aa15.04■□□□□ -0
SAFB2-206ENST00000590262 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -01e-6■■■□□ 17.3
SAFB2-206ENST00000590262 TDRD9Q8NDG6 1382 aaKnown RBP15.03■□□□□ -0
SAFB2-206ENST00000590262 RUSC2Q8N2Y8 1516 aa15.02■□□□□ -0
SAFB2-206ENST00000590262 CHD1O14646 1710 aa15.02□□□□□ -0.01
SAFB2-206ENST00000590262 ERICH3Q5RHP9 1530 aa15□□□□□ -0.01
SAFB2-206ENST00000590262 GRIN2BQ13224 1484 aa14.99□□□□□ -0.01
SAFB2-206ENST00000590262 EEA1Q15075 1411 aa14.99□□□□□ -0.01
SAFB2-206ENST00000590262 ADAMTS12P58397 1594 aa14.98□□□□□ -0.01
SAFB2-206ENST00000590262 SNAPC4Q5SXM2 1469 aa14.96□□□□□ -0.01
SAFB2-206ENST00000590262 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
SAFB2-206ENST00000590262 MAGI1Q96QZ7 1491 aaPredicted RBP14.93□□□□□ -0.02
SAFB2-206ENST00000590262 CTTNBP2Q8WZ74 1663 aa14.92□□□□□ -0.02
SAFB2-206ENST00000590262 KIF21BO75037 1637 aa14.92□□□□□ -0.02
SAFB2-206ENST00000590262 SYNJ2O15056 1496 aa14.86□□□□□ -0.03
SAFB2-206ENST00000590262 IGF1RP08069 1367 aa14.85□□□□□ -0.03
SAFB2-206ENST00000590262 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
SAFB2-206ENST00000590262 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
SAFB2-206ENST00000590262 RAPGEF2Q9Y4G8 1499 aa14.83□□□□□ -0.03
SAFB2-206ENST00000590262 CARMIL1Q5VZK9 1371 aa14.83□□□□□ -0.04
SAFB2-206ENST00000590262 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
SAFB2-206ENST00000590262 FBLN2P98095 1184 aa14.81□□□□□ -0.04
SAFB2-206ENST00000590262 PRXQ9BXM0 1461 aa14.81□□□□□ -0.04
SAFB2-206ENST00000590262 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
SAFB2-206ENST00000590262 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
SAFB2-206ENST00000590262 CEP170Q5SW79 1584 aa14.78□□□□□ -0.04
SAFB2-206ENST00000590262 CHMP7Q8WUX9 453 aaPredicted RBP14.78□□□□□ -0.04
SAFB2-206ENST00000590262 IQGAP2Q13576 1575 aa14.73□□□□□ -0.05
SAFB2-206ENST00000590262 NUP160Q12769 1436 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms