RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.27
CXXC1-213ENST00000590234 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
CXXC1-213ENST00000590234 ABCC9O60706 1549 aa30.86■■■□□ 2.53
CXXC1-213ENST00000590234 RB1CC1Q8TDY2 1594 aa29.71■■■□□ 2.35
CXXC1-213ENST00000590234 NACADO15069 1562 aa29.68■■■□□ 2.34
CXXC1-213ENST00000590234 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.34
CXXC1-213ENST00000590234 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
CXXC1-213ENST00000590234 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
CXXC1-213ENST00000590234 DCAF1Q9Y4B6 1507 aa29.39■■■□□ 2.3
CXXC1-213ENST00000590234 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
CXXC1-213ENST00000590234 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
CXXC1-213ENST00000590234 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
CXXC1-213ENST00000590234 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
CXXC1-213ENST00000590234 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
CXXC1-213ENST00000590234 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
CXXC1-213ENST00000590234 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
CXXC1-213ENST00000590234 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
CXXC1-213ENST00000590234 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
CXXC1-213ENST00000590234 SMARCA4P51532 1647 aa27.56■■■□□ 2
CXXC1-213ENST00000590234 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
CXXC1-213ENST00000590234 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
CXXC1-213ENST00000590234 SMARCA2P51531 1590 aa27.37■■□□□ 1.97
CXXC1-213ENST00000590234 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
CXXC1-213ENST00000590234 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
CXXC1-213ENST00000590234 PEG3Q9GZU2 1588 aa27.29■■□□□ 1.96
CXXC1-213ENST00000590234 HMGXB3Q12766 1538 aa27.26■■□□□ 1.95
CXXC1-213ENST00000590234 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
CXXC1-213ENST00000590234 WIZO95785 1651 aa27.08■■□□□ 1.93
CXXC1-213ENST00000590234 RSF1Q96T23 1441 aaPredicted RBP27.05■■□□□ 1.92
CXXC1-213ENST00000590234 TOP2AP11388 1531 aaKnown RBP26.8■■□□□ 1.88
CXXC1-213ENST00000590234 NESP48681 1621 aa26.71■■□□□ 1.87
CXXC1-213ENST00000590234 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
CXXC1-213ENST00000590234 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
CXXC1-213ENST00000590234 CADPSQ9ULU8 1353 aa26.57■■□□□ 1.84
CXXC1-213ENST00000590234 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
CXXC1-213ENST00000590234 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
CXXC1-213ENST00000590234 CFTRP13569 1480 aa26.42■■□□□ 1.82
CXXC1-213ENST00000590234 KIF21AQ7Z4S6 1674 aa26.42■■□□□ 1.82
CXXC1-213ENST00000590234 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
CXXC1-213ENST00000590234 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.8
CXXC1-213ENST00000590234 CUX2O14529 1486 aa26.31■■□□□ 1.8
CXXC1-213ENST00000590234 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
CXXC1-213ENST00000590234 PRDM2Q13029 1718 aa26.26■■□□□ 1.79
CXXC1-213ENST00000590234 CEP164Q9UPV0 1460 aa26.25■■□□□ 1.79
CXXC1-213ENST00000590234 MRC2Q9UBG0 1479 aa26.21■■□□□ 1.79
CXXC1-213ENST00000590234 WDR62O43379 1518 aa26.13■■□□□ 1.77
CXXC1-213ENST00000590234 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
CXXC1-213ENST00000590234 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
CXXC1-213ENST00000590234 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
CXXC1-213ENST00000590234 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
CXXC1-213ENST00000590234 IFT140Q96RY7 1462 aa25.7■■□□□ 1.7
CXXC1-213ENST00000590234 CUX1P39880 1505 aa25.68■■□□□ 1.7
CXXC1-213ENST00000590234 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
CXXC1-213ENST00000590234 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
CXXC1-213ENST00000590234 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
CXXC1-213ENST00000590234 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
CXXC1-213ENST00000590234 SOGA1O94964 1423 aa25.53■■□□□ 1.68
CXXC1-213ENST00000590234 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
CXXC1-213ENST00000590234 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
CXXC1-213ENST00000590234 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
CXXC1-213ENST00000590234 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
CXXC1-213ENST00000590234 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
CXXC1-213ENST00000590234 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
CXXC1-213ENST00000590234 DNAJC5Q9H3Z4 198 aa25.43■■□□□ 1.66
CXXC1-213ENST00000590234 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.662e-10■□□□□ 10.7
CXXC1-213ENST00000590234 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
CXXC1-213ENST00000590234 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
CXXC1-213ENST00000590234 ABCA10Q8WWZ4 1543 aa25.34■■□□□ 1.65
CXXC1-213ENST00000590234 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
CXXC1-213ENST00000590234 GRIN2BQ13224 1484 aa25.24■■□□□ 1.63
CXXC1-213ENST00000590234 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
CXXC1-213ENST00000590234 PBRM1Q86U86 1689 aa25.22■■□□□ 1.63
CXXC1-213ENST00000590234 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
CXXC1-213ENST00000590234 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
CXXC1-213ENST00000590234 MAGI1Q96QZ7 1491 aaPredicted RBP25.18■■□□□ 1.62
CXXC1-213ENST00000590234 CHD1O14646 1710 aa25.17■■□□□ 1.62
CXXC1-213ENST00000590234 FBLN2P98095 1184 aa25.11■■□□□ 1.61
CXXC1-213ENST00000590234 SYNJ2O15056 1496 aa25.08■■□□□ 1.6
CXXC1-213ENST00000590234 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
CXXC1-213ENST00000590234 ERICH3Q5RHP9 1530 aa25.05■■□□□ 1.6
CXXC1-213ENST00000590234 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
CXXC1-213ENST00000590234 KIF27Q86VH2 1401 aa24.99■■□□□ 1.59
CXXC1-213ENST00000590234 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.59
CXXC1-213ENST00000590234 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
CXXC1-213ENST00000590234 GRIN2AQ12879 1464 aa24.91■■□□□ 1.58
CXXC1-213ENST00000590234 CLASP1Q7Z460 1538 aa24.88■■□□□ 1.57
CXXC1-213ENST00000590234 IGF1RP08069 1367 aa24.86■■□□□ 1.57
CXXC1-213ENST00000590234 CUL7Q14999 1698 aa24.84■■□□□ 1.57
CXXC1-213ENST00000590234 RIMBP3CA6NJZ7 1639 aa24.83■■□□□ 1.56
CXXC1-213ENST00000590234 RIMBP3BA6NNM3 1639 aa24.83■■□□□ 1.56
CXXC1-213ENST00000590234 RIMBP3Q9UFD9 1639 aa24.83■■□□□ 1.56
CXXC1-213ENST00000590234 ARHGEF11O15085 1522 aa24.82■■□□□ 1.56
CXXC1-213ENST00000590234 NUP160Q12769 1436 aa24.8■■□□□ 1.56
CXXC1-213ENST00000590234 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
CXXC1-213ENST00000590234 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
CXXC1-213ENST00000590234 CARMIL1Q5VZK9 1371 aa24.72■■□□□ 1.55
CXXC1-213ENST00000590234 SHROOM2Q13796 1616 aa24.62■■□□□ 1.53
CXXC1-213ENST00000590234 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
CXXC1-213ENST00000590234 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
CXXC1-213ENST00000590234 RAPGEF2Q9Y4G8 1499 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms