RNA–Protein interactions for RNA: ENST00000590097.5

PKN1-212, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-212ENST00000590097 NISCHQ9Y2I1 1504 aa45.52■■■■■ 4.88
PKN1-212ENST00000590097 ABCC9O60706 1549 aa41.99■■■■■ 4.31
PKN1-212ENST00000590097 CCDC180Q9P1Z9 1646 aa41.07■■■■■ 4.16
PKN1-212ENST00000590097 DNAJC5BQ9UF47 199 aa40.25■■■■■ 4.03
PKN1-212ENST00000590097 RB1CC1Q8TDY2 1594 aa39.46■■■■□ 3.91
PKN1-212ENST00000590097 PABPN1Q86U42 306 aaKnown RBP eCLIP39.02■■■■□ 3.84
PKN1-212ENST00000590097 NACADO15069 1562 aa39.02■■■■□ 3.84
PKN1-212ENST00000590097 DCAF8L2P0C7V8 631 aa38.74■■■■□ 3.79
PKN1-212ENST00000590097 UNC13AQ9UPW8 1703 aa38.71■■■■□ 3.79
PKN1-212ENST00000590097 BICRAQ9NZM4 1560 aa38.55■■■■□ 3.76
PKN1-212ENST00000590097 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
PKN1-212ENST00000590097 CC2D2AQ9P2K1 1620 aa37.85■■■■□ 3.65
PKN1-212ENST00000590097 CECR2Q9BXF3 1484 aa37.84■■■■□ 3.65
PKN1-212ENST00000590097 SHROOM4Q9ULL8 1493 aa37.68■■■■□ 3.62
PKN1-212ENST00000590097 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
PKN1-212ENST00000590097 EIF4G1Q04637 1599 aaKnown RBP37.57■■■■□ 3.6
PKN1-212ENST00000590097 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
PKN1-212ENST00000590097 DCAF1Q9Y4B6 1507 aa37.47■■■■□ 3.59
PKN1-212ENST00000590097 DNAJC5Q9H3Z4 198 aa37.33■■■■□ 3.57
PKN1-212ENST00000590097 CUX2O14529 1486 aa36.37■■■■□ 3.41
PKN1-212ENST00000590097 ERCC6Q03468 1493 aa36.17■■■■□ 3.38
PKN1-212ENST00000590097 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
PKN1-212ENST00000590097 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
PKN1-212ENST00000590097 NESP48681 1621 aa35.92■■■■□ 3.34
PKN1-212ENST00000590097 HMGXB3Q12766 1538 aa35.72■■■■□ 3.31
PKN1-212ENST00000590097 SMARCA4P51532 1647 aa35.67■■■■□ 3.3
PKN1-212ENST00000590097 SMARCA2P51531 1590 aa35.66■■■■□ 3.3
PKN1-212ENST00000590097 THOC2Q8NI27 1593 aaKnown RBP35.63■■■■□ 3.29
PKN1-212ENST00000590097 BAZ1BQ9UIG0 1483 aaKnown RBP35.46■■■■□ 3.27
PKN1-212ENST00000590097 TRIM41Q8WV44 630 aa35.37■■■■□ 3.25
PKN1-212ENST00000590097 LAMC3Q9Y6N6 1575 aa35.34■■■■□ 3.25
PKN1-212ENST00000590097 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
PKN1-212ENST00000590097 PEG3Q9GZU2 1588 aa35.3■■■■□ 3.24
PKN1-212ENST00000590097 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
PKN1-212ENST00000590097 MROH2BQ7Z745 1585 aa35.15■■■■□ 3.22
PKN1-212ENST00000590097 PDS5BQ9NTI5 1447 aa35.15■■■■□ 3.22
PKN1-212ENST00000590097 CADPSQ9ULU8 1353 aa34.97■■■■□ 3.19
PKN1-212ENST00000590097 MRC2Q9UBG0 1479 aa34.96■■■■□ 3.19
PKN1-212ENST00000590097 WDR62O43379 1518 aa34.92■■■■□ 3.18
PKN1-212ENST00000590097 WIZO95785 1651 aa34.66■■■■□ 3.14
PKN1-212ENST00000590097 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
PKN1-212ENST00000590097 OSCARQ8IYS5 282 aa34.59■■■■□ 3.13
PKN1-212ENST00000590097 FANCD2Q9BXW9 1451 aa34.58■■■■□ 3.13
PKN1-212ENST00000590097 URB2Q14146 1524 aaKnown RBP34.43■■■■□ 3.1
PKN1-212ENST00000590097 CFTRP13569 1480 aa34.42■■■■□ 3.1
PKN1-212ENST00000590097 RIMBP3CA6NJZ7 1639 aa34.31■■■■□ 3.08
PKN1-212ENST00000590097 RIMBP3BA6NNM3 1639 aa34.31■■■■□ 3.08
PKN1-212ENST00000590097 RIMBP3Q9UFD9 1639 aa34.31■■■■□ 3.08
PKN1-212ENST00000590097 ZNF608Q9ULD9 1512 aaPredicted RBP34.15■■■■□ 3.06
PKN1-212ENST00000590097 RSF1Q96T23 1441 aaPredicted RBP34.12■■■■□ 3.05
PKN1-212ENST00000590097 ARHGEF11O15085 1522 aa34.11■■■■□ 3.05
PKN1-212ENST00000590097 TOP2AP11388 1531 aaKnown RBP34.09■■■■□ 3.05
PKN1-212ENST00000590097 IFT140Q96RY7 1462 aa33.97■■■■□ 3.03
PKN1-212ENST00000590097 CYB5RLQ6IPT4 315 aa33.91■■■■□ 3.02
PKN1-212ENST00000590097 PRDM2Q13029 1718 aa33.9■■■■□ 3.02
PKN1-212ENST00000590097 TOPBP1Q92547 1522 aa33.86■■■■□ 3.01
PKN1-212ENST00000590097 EIF4G3O43432 1585 aaKnown RBP33.82■■■■□ 3
PKN1-212ENST00000590097 CCDC88BA6NC98 1476 aa33.79■■■■□ 3
PKN1-212ENST00000590097 ARAP1Q96P48 1450 aa33.78■■■■□ 3
PKN1-212ENST00000590097 CHD1O14646 1710 aa33.72■■■□□ 2.99
PKN1-212ENST00000590097 AQRO60306 1485 aaKnown RBP eCLIP33.71■■■□□ 2.996e-7■■■■■ 31.1
PKN1-212ENST00000590097 TRHP20396 242 aaPredicted RBP33.71■■■□□ 2.99
PKN1-212ENST00000590097 TARBP1Q13395 1621 aaKnown RBP33.64■■■□□ 2.98
PKN1-212ENST00000590097 DNMBPQ6XZF7 1577 aa33.61■■■□□ 2.97
PKN1-212ENST00000590097 ABCC8Q09428 1581 aa33.56■■■□□ 2.96
PKN1-212ENST00000590097 FBLN2P98095 1184 aa33.55■■■□□ 2.96
PKN1-212ENST00000590097 POLA1P09884 1462 aaPredicted RBP33.48■■■□□ 2.95
PKN1-212ENST00000590097 RAD54L2Q9Y4B4 1467 aa33.44■■■□□ 2.94
PKN1-212ENST00000590097 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
PKN1-212ENST00000590097 CLASP1Q7Z460 1538 aa33.35■■■□□ 2.93
PKN1-212ENST00000590097 SNAPC4Q5SXM2 1469 aa33.31■■■□□ 2.92
PKN1-212ENST00000590097 SOGA1O94964 1423 aa33.27■■■□□ 2.92
PKN1-212ENST00000590097 AEBP2Q6ZN18 517 aaPredicted RBP33.2■■■□□ 2.91
PKN1-212ENST00000590097 FGD5Q6ZNL6 1462 aa33.15■■■□□ 2.9
PKN1-212ENST00000590097 CHMP7Q8WUX9 453 aaPredicted RBP33.14■■■□□ 2.9
PKN1-212ENST00000590097 SYNJ1O43426 1573 aa33.13■■■□□ 2.89
PKN1-212ENST00000590097 MAGI1Q96QZ7 1491 aaPredicted RBP33.09■■■□□ 2.89
PKN1-212ENST00000590097 CUX1P39880 1505 aa33.05■■■□□ 2.88
PKN1-212ENST00000590097 WDR97A6NE52 1622 aa33.05■■■□□ 2.88
PKN1-212ENST00000590097 GRIN2BQ13224 1484 aa33.04■■■□□ 2.88
PKN1-212ENST00000590097 SYNJ2O15056 1496 aa33.02■■■□□ 2.88
PKN1-212ENST00000590097 GAPVD1Q14C86 1478 aa33■■■□□ 2.87
PKN1-212ENST00000590097 ERCC6L2Q5T890 1561 aa32.89■■■□□ 2.86
PKN1-212ENST00000590097 PBRM1Q86U86 1689 aa32.86■■■□□ 2.85
PKN1-212ENST00000590097 ABCA5Q8WWZ7 1642 aa32.74■■■□□ 2.83
PKN1-212ENST00000590097 ABCA10Q8WWZ4 1543 aa32.7■■■□□ 2.83
PKN1-212ENST00000590097 GRIN2AQ12879 1464 aa32.64■■■□□ 2.82
PKN1-212ENST00000590097 CEP170Q5SW79 1584 aa32.64■■■□□ 2.82
PKN1-212ENST00000590097 NUP160Q12769 1436 aa32.6■■■□□ 2.81
PKN1-212ENST00000590097 ADAMTS12P58397 1594 aa32.54■■■□□ 2.8
PKN1-212ENST00000590097 KIF13AQ9H1H9 1805 aa32.53■■■□□ 2.8
PKN1-212ENST00000590097 SHROOM2Q13796 1616 aa32.52■■■□□ 2.8
PKN1-212ENST00000590097 FHAD1B1AJZ9 1412 aa32.37■■■□□ 2.77
PKN1-212ENST00000590097 WRNQ14191 1432 aaPredicted RBP eCLIP32.35■■■□□ 2.778e-8■■■■■ 37.6
PKN1-212ENST00000590097 PRG4Q92954 1404 aaPredicted RBP32.33■■■□□ 2.77
PKN1-212ENST00000590097 ABCC10Q5T3U5 1492 aa32.24■■■□□ 2.75
PKN1-212ENST00000590097 FAM69CQ0P6D2 419 aa32.24■■■□□ 2.75
PKN1-212ENST00000590097 BIVM-ERCC5R4GMW8 1640 aa32.23■■■□□ 2.75
PKN1-212ENST00000590097 JPH4Q96JJ6 628 aa32.23■■■□□ 2.75
PKN1-212ENST00000590097 ERICH3Q5RHP9 1530 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 762.8 ms