RNA–Protein interactions for RNA: ENST00000590057.5

PCSK4-209, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-209ENST00000590057 NISCHQ9Y2I1 1504 aa36.37■■■■□ 3.41
PCSK4-209ENST00000590057 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.79
PCSK4-209ENST00000590057 ABCC9O60706 1549 aa32.36■■■□□ 2.77
PCSK4-209ENST00000590057 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
PCSK4-209ENST00000590057 NACADO15069 1562 aa30.66■■■□□ 2.5
PCSK4-209ENST00000590057 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
PCSK4-209ENST00000590057 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
PCSK4-209ENST00000590057 UNC13AQ9UPW8 1703 aa30.28■■■□□ 2.44
PCSK4-209ENST00000590057 DNAJC5BQ9UF47 199 aa30.24■■■□□ 2.43
PCSK4-209ENST00000590057 PABPN1Q86U42 306 aaKnown RBP eCLIP30.18■■■□□ 2.42
PCSK4-209ENST00000590057 ZCCHC6Q5VYS8 1495 aaKnown RBP30.18■■■□□ 2.42
PCSK4-209ENST00000590057 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
PCSK4-209ENST00000590057 DCAF1Q9Y4B6 1507 aa30■■■□□ 2.39
PCSK4-209ENST00000590057 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
PCSK4-209ENST00000590057 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
PCSK4-209ENST00000590057 CC2D2AQ9P2K1 1620 aa29.24■■■□□ 2.27
PCSK4-209ENST00000590057 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
PCSK4-209ENST00000590057 CECR2Q9BXF3 1484 aa29.09■■■□□ 2.25
PCSK4-209ENST00000590057 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
PCSK4-209ENST00000590057 NCAPD3P42695 1498 aa28.33■■■□□ 2.13
PCSK4-209ENST00000590057 ATAD2BQ9ULI0 1458 aa28.29■■■□□ 2.12
PCSK4-209ENST00000590057 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
PCSK4-209ENST00000590057 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
PCSK4-209ENST00000590057 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
PCSK4-209ENST00000590057 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
PCSK4-209ENST00000590057 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
PCSK4-209ENST00000590057 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
PCSK4-209ENST00000590057 NESP48681 1621 aa27.89■■■□□ 2.06
PCSK4-209ENST00000590057 ERCC6Q03468 1493 aa27.84■■■□□ 2.05
PCSK4-209ENST00000590057 WIZO95785 1651 aa27.76■■■□□ 2.03
PCSK4-209ENST00000590057 CUX2O14529 1486 aa27.71■■■□□ 2.03
PCSK4-209ENST00000590057 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
PCSK4-209ENST00000590057 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
PCSK4-209ENST00000590057 THOC2Q8NI27 1593 aaKnown RBP27.54■■■□□ 2
PCSK4-209ENST00000590057 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
PCSK4-209ENST00000590057 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
PCSK4-209ENST00000590057 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
PCSK4-209ENST00000590057 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
PCSK4-209ENST00000590057 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
PCSK4-209ENST00000590057 MRC2Q9UBG0 1479 aa27.23■■□□□ 1.95
PCSK4-209ENST00000590057 CFTRP13569 1480 aa27.21■■□□□ 1.95
PCSK4-209ENST00000590057 WDR62O43379 1518 aa27.17■■□□□ 1.94
PCSK4-209ENST00000590057 FANCD2Q9BXW9 1451 aa27.17■■□□□ 1.94
PCSK4-209ENST00000590057 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
PCSK4-209ENST00000590057 CCDC88BA6NC98 1476 aa27.08■■□□□ 1.93
PCSK4-209ENST00000590057 PRDM2Q13029 1718 aa27■■□□□ 1.91
PCSK4-209ENST00000590057 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
PCSK4-209ENST00000590057 TOPBP1Q92547 1522 aa26.7■■□□□ 1.86
PCSK4-209ENST00000590057 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
PCSK4-209ENST00000590057 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
PCSK4-209ENST00000590057 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
PCSK4-209ENST00000590057 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
PCSK4-209ENST00000590057 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
PCSK4-209ENST00000590057 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
PCSK4-209ENST00000590057 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
PCSK4-209ENST00000590057 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
PCSK4-209ENST00000590057 POLA1P09884 1462 aaPredicted RBP26.43■■□□□ 1.82
PCSK4-209ENST00000590057 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
PCSK4-209ENST00000590057 AQRO60306 1485 aaKnown RBP eCLIP26.4■■□□□ 1.82
PCSK4-209ENST00000590057 RAD54L2Q9Y4B4 1467 aa26.37■■□□□ 1.81
PCSK4-209ENST00000590057 CUX1P39880 1505 aa26.34■■□□□ 1.81
PCSK4-209ENST00000590057 SOGA1O94964 1423 aa26.31■■□□□ 1.8
PCSK4-209ENST00000590057 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
PCSK4-209ENST00000590057 CHD1O14646 1710 aa26.26■■□□□ 1.79
PCSK4-209ENST00000590057 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
PCSK4-209ENST00000590057 RIMBP3CA6NJZ7 1639 aa26.2■■□□□ 1.78
PCSK4-209ENST00000590057 RIMBP3BA6NNM3 1639 aa26.2■■□□□ 1.78
PCSK4-209ENST00000590057 RIMBP3Q9UFD9 1639 aa26.2■■□□□ 1.78
PCSK4-209ENST00000590057 WDR97A6NE52 1622 aa26.14■■□□□ 1.78
PCSK4-209ENST00000590057 FBLN2P98095 1184 aa26.14■■□□□ 1.78
PCSK4-209ENST00000590057 ARHGEF11O15085 1522 aa26.11■■□□□ 1.77
PCSK4-209ENST00000590057 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
PCSK4-209ENST00000590057 GRIN2BQ13224 1484 aa26.03■■□□□ 1.76
PCSK4-209ENST00000590057 PBRM1Q86U86 1689 aa26.01■■□□□ 1.75
PCSK4-209ENST00000590057 ABCA10Q8WWZ4 1543 aa26■■□□□ 1.75
PCSK4-209ENST00000590057 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
PCSK4-209ENST00000590057 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
PCSK4-209ENST00000590057 ABCA5Q8WWZ7 1642 aa25.97■■□□□ 1.75
PCSK4-209ENST00000590057 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
PCSK4-209ENST00000590057 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
PCSK4-209ENST00000590057 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
PCSK4-209ENST00000590057 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
PCSK4-209ENST00000590057 WRNQ14191 1432 aaPredicted RBP eCLIP25.93■■□□□ 1.74
PCSK4-209ENST00000590057 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
PCSK4-209ENST00000590057 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
PCSK4-209ENST00000590057 CYB5RLQ6IPT4 315 aa25.91■■□□□ 1.74
PCSK4-209ENST00000590057 ARAP1Q96P48 1450 aa25.89■■□□□ 1.73
PCSK4-209ENST00000590057 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
PCSK4-209ENST00000590057 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
PCSK4-209ENST00000590057 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
PCSK4-209ENST00000590057 ERICH3Q5RHP9 1530 aa25.66■■□□□ 1.7
PCSK4-209ENST00000590057 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
PCSK4-209ENST00000590057 NUP160Q12769 1436 aa25.62■■□□□ 1.69
PCSK4-209ENST00000590057 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
PCSK4-209ENST00000590057 TRHP20396 242 aaPredicted RBP25.52■■□□□ 1.68
PCSK4-209ENST00000590057 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
PCSK4-209ENST00000590057 IGF1RP08069 1367 aa25.43■■□□□ 1.66
PCSK4-209ENST00000590057 KIF27Q86VH2 1401 aa25.39■■□□□ 1.66
PCSK4-209ENST00000590057 RUSC2Q8N2Y8 1516 aa25.38■■□□□ 1.65
PCSK4-209ENST00000590057 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms