RNA–Protein interactions for RNA: ENST00000589956.5

TNPO2-216, Transcript of transportin 2, humanhuman

TSL 5

Gene TNPO2, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-216ENST00000589956 NISCHQ9Y2I1 1504 aa44.5■■■■■ 4.71
TNPO2-216ENST00000589956 CCDC180Q9P1Z9 1646 aa39.95■■■■□ 3.99
TNPO2-216ENST00000589956 ABCC9O60706 1549 aa39.5■■■■□ 3.91
TNPO2-216ENST00000589956 RB1CC1Q8TDY2 1594 aa37.8■■■■□ 3.64
TNPO2-216ENST00000589956 NACADO15069 1562 aa37.62■■■■□ 3.61
TNPO2-216ENST00000589956 MYO15BQ96JP2 1530 aa37.22■■■■□ 3.55
TNPO2-216ENST00000589956 DCAF8L2P0C7V8 631 aa37.18■■■■□ 3.54
TNPO2-216ENST00000589956 UNC13AQ9UPW8 1703 aa37.1■■■■□ 3.53
TNPO2-216ENST00000589956 ZCCHC6Q5VYS8 1495 aaKnown RBP36.98■■■■□ 3.51
TNPO2-216ENST00000589956 DCAF1Q9Y4B6 1507 aa36.84■■■■□ 3.49
TNPO2-216ENST00000589956 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
TNPO2-216ENST00000589956 BICRAQ9NZM4 1560 aa36.73■■■■□ 3.47
TNPO2-216ENST00000589956 PABPN1Q86U42 306 aaKnown RBP eCLIP36.71■■■■□ 3.47
TNPO2-216ENST00000589956 SCRIBQ14160 1630 aa36.3■■■■□ 3.4
TNPO2-216ENST00000589956 SHROOM4Q9ULL8 1493 aa36.28■■■■□ 3.4
TNPO2-216ENST00000589956 CC2D2AQ9P2K1 1620 aa35.79■■■■□ 3.32
TNPO2-216ENST00000589956 EIF4G1Q04637 1599 aaKnown RBP35.77■■■■□ 3.32
TNPO2-216ENST00000589956 CECR2Q9BXF3 1484 aa35.57■■■■□ 3.28
TNPO2-216ENST00000589956 SMARCA4P51532 1647 aa34.7■■■■□ 3.15
TNPO2-216ENST00000589956 NCAPD3P42695 1498 aa34.68■■■■□ 3.14
TNPO2-216ENST00000589956 ATAD2BQ9ULI0 1458 aa34.61■■■■□ 3.13
TNPO2-216ENST00000589956 SMARCA2P51531 1590 aa34.56■■■■□ 3.12
TNPO2-216ENST00000589956 BAZ1AQ9NRL2 1556 aaPredicted RBP34.54■■■■□ 3.12
TNPO2-216ENST00000589956 HMGXB3Q12766 1538 aa34.52■■■■□ 3.12
TNPO2-216ENST00000589956 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
TNPO2-216ENST00000589956 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
TNPO2-216ENST00000589956 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
TNPO2-216ENST00000589956 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
TNPO2-216ENST00000589956 NESP48681 1621 aa34.03■■■■□ 3.04
TNPO2-216ENST00000589956 CUX2O14529 1486 aa34.01■■■■□ 3.03
TNPO2-216ENST00000589956 WIZO95785 1651 aa33.93■■■■□ 3.02
TNPO2-216ENST00000589956 LAMC3Q9Y6N6 1575 aa33.91■■■■□ 3.02
TNPO2-216ENST00000589956 THOC2Q8NI27 1593 aaKnown RBP33.76■■■□□ 2.99
TNPO2-216ENST00000589956 KIF21AQ7Z4S6 1674 aa33.72■■■□□ 2.99
TNPO2-216ENST00000589956 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
TNPO2-216ENST00000589956 PDS5BQ9NTI5 1447 aa33.61■■■□□ 2.97
TNPO2-216ENST00000589956 CADPSQ9ULU8 1353 aa33.59■■■□□ 2.97
TNPO2-216ENST00000589956 DNAJC5Q9H3Z4 198 aa33.57■■■□□ 2.96
TNPO2-216ENST00000589956 TOP2AP11388 1531 aaKnown RBP33.52■■■□□ 2.96
TNPO2-216ENST00000589956 MRC2Q9UBG0 1479 aa33.35■■■□□ 2.93
TNPO2-216ENST00000589956 WDR62O43379 1518 aa33.32■■■□□ 2.92
TNPO2-216ENST00000589956 CFTRP13569 1480 aa33.31■■■□□ 2.92
TNPO2-216ENST00000589956 CEP164Q9UPV0 1460 aa33.26■■■□□ 2.92
TNPO2-216ENST00000589956 FANCD2Q9BXW9 1451 aa33.24■■■□□ 2.91
TNPO2-216ENST00000589956 PRDM2Q13029 1718 aa33.2■■■□□ 2.91
TNPO2-216ENST00000589956 CCDC88BA6NC98 1476 aa33.06■■■□□ 2.88
TNPO2-216ENST00000589956 URB2Q14146 1524 aaKnown RBP32.97■■■□□ 2.87
TNPO2-216ENST00000589956 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
TNPO2-216ENST00000589956 DNMBPQ6XZF7 1577 aa32.61■■■□□ 2.81
TNPO2-216ENST00000589956 ABCC8Q09428 1581 aa32.6■■■□□ 2.81
TNPO2-216ENST00000589956 IFT140Q96RY7 1462 aa32.59■■■□□ 2.81
TNPO2-216ENST00000589956 ZNF608Q9ULD9 1512 aaPredicted RBP32.49■■■□□ 2.79
TNPO2-216ENST00000589956 EIF4G3O43432 1585 aaKnown RBP32.41■■■□□ 2.78
TNPO2-216ENST00000589956 TARBP1Q13395 1621 aaKnown RBP32.41■■■□□ 2.78
TNPO2-216ENST00000589956 POLA1P09884 1462 aaPredicted RBP32.35■■■□□ 2.77
TNPO2-216ENST00000589956 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
TNPO2-216ENST00000589956 CUX1P39880 1505 aa32.21■■■□□ 2.75
TNPO2-216ENST00000589956 AQRO60306 1485 aaKnown RBP eCLIP32.19■■■□□ 2.748e-8■■■■□ 19.4
TNPO2-216ENST00000589956 FGD5Q6ZNL6 1462 aa32.17■■■□□ 2.74
TNPO2-216ENST00000589956 RAD54L2Q9Y4B4 1467 aa32.17■■■□□ 2.74
TNPO2-216ENST00000589956 SUPT5HO00267 1087 aaKnown RBP32.17■■■□□ 2.74
TNPO2-216ENST00000589956 CHD1O14646 1710 aa32.17■■■□□ 2.74
TNPO2-216ENST00000589956 WDR97A6NE52 1622 aa32.15■■■□□ 2.74
TNPO2-216ENST00000589956 SOGA1O94964 1423 aa32.13■■■□□ 2.73
TNPO2-216ENST00000589956 TRIM41Q8WV44 630 aa32.13■■■□□ 2.73
TNPO2-216ENST00000589956 RIMBP3CA6NJZ7 1639 aa32.08■■■□□ 2.73
TNPO2-216ENST00000589956 RIMBP3BA6NNM3 1639 aa32.08■■■□□ 2.73
TNPO2-216ENST00000589956 RIMBP3Q9UFD9 1639 aa32.08■■■□□ 2.73
TNPO2-216ENST00000589956 TDRD9Q8NDG6 1382 aaKnown RBP32■■■□□ 2.71
TNPO2-216ENST00000589956 ARHGEF11O15085 1522 aa31.96■■■□□ 2.71
TNPO2-216ENST00000589956 SNAPC4Q5SXM2 1469 aa31.92■■■□□ 2.7
TNPO2-216ENST00000589956 PBRM1Q86U86 1689 aa31.9■■■□□ 2.7
TNPO2-216ENST00000589956 MAGI1Q96QZ7 1491 aaPredicted RBP31.88■■■□□ 2.69
TNPO2-216ENST00000589956 GRIN2BQ13224 1484 aa31.87■■■□□ 2.69
TNPO2-216ENST00000589956 ABCA10Q8WWZ4 1543 aa31.85■■■□□ 2.69
TNPO2-216ENST00000589956 ABCA5Q8WWZ7 1642 aa31.84■■■□□ 2.69
TNPO2-216ENST00000589956 BIVM-ERCC5R4GMW8 1640 aa31.84■■■□□ 2.69
TNPO2-216ENST00000589956 FBLN2P98095 1184 aa31.81■■■□□ 2.68
TNPO2-216ENST00000589956 TOP2BQ02880 1626 aa31.79■■■□□ 2.68
TNPO2-216ENST00000589956 GAPVD1Q14C86 1478 aa31.78■■■□□ 2.68
TNPO2-216ENST00000589956 CLASP1Q7Z460 1538 aa31.77■■■□□ 2.68
TNPO2-216ENST00000589956 SYNJ2O15056 1496 aa31.75■■■□□ 2.67
TNPO2-216ENST00000589956 SYNJ1O43426 1573 aa31.75■■■□□ 2.67
TNPO2-216ENST00000589956 WRNQ14191 1432 aaPredicted RBP eCLIP31.72■■■□□ 2.67
TNPO2-216ENST00000589956 ARAP1Q96P48 1450 aa31.66■■■□□ 2.66
TNPO2-216ENST00000589956 CHMP7Q8WUX9 453 aaPredicted RBP31.66■■■□□ 2.66
TNPO2-216ENST00000589956 ADAMTS12P58397 1594 aa31.56■■■□□ 2.64
TNPO2-216ENST00000589956 CYB5RLQ6IPT4 315 aa31.55■■■□□ 2.64
TNPO2-216ENST00000589956 GRIN2AQ12879 1464 aa31.48■■■□□ 2.63
TNPO2-216ENST00000589956 ERICH3Q5RHP9 1530 aa31.46■■■□□ 2.63
TNPO2-216ENST00000589956 CEP170Q5SW79 1584 aa31.39■■■□□ 2.62
TNPO2-216ENST00000589956 FHAD1B1AJZ9 1412 aa31.39■■■□□ 2.62
TNPO2-216ENST00000589956 NUP160Q12769 1436 aa31.38■■■□□ 2.61
TNPO2-216ENST00000589956 SHROOM2Q13796 1616 aa31.3■■■□□ 2.6
TNPO2-216ENST00000589956 ERCC6L2Q5T890 1561 aa31.25■■■□□ 2.59
TNPO2-216ENST00000589956 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
TNPO2-216ENST00000589956 CUL7Q14999 1698 aa31.1■■■□□ 2.57
TNPO2-216ENST00000589956 KIF27Q86VH2 1401 aa31.08■■■□□ 2.57
TNPO2-216ENST00000589956 TRHP20396 242 aaPredicted RBP31.08■■■□□ 2.57
TNPO2-216ENST00000589956 IGF1RP08069 1367 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms