RNA–Protein interactions for RNA: ENST00000589886.5

RANBP3-217, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 472 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-217ENST00000589886 NISCHQ9Y2I1 1504 aa37.18■■■■□ 3.54
RANBP3-217ENST00000589886 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
RANBP3-217ENST00000589886 ABCC9O60706 1549 aa31.26■■■□□ 2.59
RANBP3-217ENST00000589886 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
RANBP3-217ENST00000589886 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
RANBP3-217ENST00000589886 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
RANBP3-217ENST00000589886 NACADO15069 1562 aa30.64■■■□□ 2.5
RANBP3-217ENST00000589886 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
RANBP3-217ENST00000589886 RB1CC1Q8TDY2 1594 aa30.48■■■□□ 2.47
RANBP3-217ENST00000589886 SCRIBQ14160 1630 aa29.87■■■□□ 2.37
RANBP3-217ENST00000589886 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
RANBP3-217ENST00000589886 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
RANBP3-217ENST00000589886 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
RANBP3-217ENST00000589886 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
RANBP3-217ENST00000589886 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
RANBP3-217ENST00000589886 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
RANBP3-217ENST00000589886 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
RANBP3-217ENST00000589886 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
RANBP3-217ENST00000589886 MROH2BQ7Z745 1585 aa28.63■■■□□ 2.17
RANBP3-217ENST00000589886 RSF1Q96T23 1441 aaPredicted RBP28.58■■■□□ 2.17
RANBP3-217ENST00000589886 PEG3Q9GZU2 1588 aa28.46■■■□□ 2.15
RANBP3-217ENST00000589886 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
RANBP3-217ENST00000589886 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
RANBP3-217ENST00000589886 WIZO95785 1651 aa28.35■■■□□ 2.13
RANBP3-217ENST00000589886 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
RANBP3-217ENST00000589886 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
RANBP3-217ENST00000589886 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
RANBP3-217ENST00000589886 HMGXB3Q12766 1538 aa28.19■■■□□ 2.1
RANBP3-217ENST00000589886 TOP2AP11388 1531 aaKnown RBP28.14■■■□□ 2.1
RANBP3-217ENST00000589886 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
RANBP3-217ENST00000589886 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
RANBP3-217ENST00000589886 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
RANBP3-217ENST00000589886 CFTRP13569 1480 aa27.44■■□□□ 1.98
RANBP3-217ENST00000589886 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
RANBP3-217ENST00000589886 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
RANBP3-217ENST00000589886 PRDM2Q13029 1718 aa27.33■■□□□ 1.97
RANBP3-217ENST00000589886 NESP48681 1621 aa27.27■■□□□ 1.96
RANBP3-217ENST00000589886 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
RANBP3-217ENST00000589886 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
RANBP3-217ENST00000589886 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
RANBP3-217ENST00000589886 KIF21AQ7Z4S6 1674 aa27■■□□□ 1.91
RANBP3-217ENST00000589886 ABCC8Q09428 1581 aa26.94■■□□□ 1.9
RANBP3-217ENST00000589886 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.95e-6■■■■■ 29.2
RANBP3-217ENST00000589886 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
RANBP3-217ENST00000589886 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
RANBP3-217ENST00000589886 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
RANBP3-217ENST00000589886 BIVM-ERCC5R4GMW8 1640 aa26.83■■□□□ 1.88
RANBP3-217ENST00000589886 CUX1P39880 1505 aa26.82■■□□□ 1.88
RANBP3-217ENST00000589886 DNMBPQ6XZF7 1577 aa26.82■■□□□ 1.88
RANBP3-217ENST00000589886 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
RANBP3-217ENST00000589886 SYNJ1O43426 1573 aa26.81■■□□□ 1.88
RANBP3-217ENST00000589886 URB2Q14146 1524 aaKnown RBP26.79■■□□□ 1.88
RANBP3-217ENST00000589886 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
RANBP3-217ENST00000589886 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
RANBP3-217ENST00000589886 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
RANBP3-217ENST00000589886 WDR62O43379 1518 aa26.74■■□□□ 1.87
RANBP3-217ENST00000589886 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
RANBP3-217ENST00000589886 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
RANBP3-217ENST00000589886 SOGA1O94964 1423 aa26.48■■□□□ 1.83
RANBP3-217ENST00000589886 CUX2O14529 1486 aa26.48■■□□□ 1.83
RANBP3-217ENST00000589886 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
RANBP3-217ENST00000589886 IFT140Q96RY7 1462 aa26.43■■□□□ 1.82
RANBP3-217ENST00000589886 ABCA10Q8WWZ4 1543 aa26.43■■□□□ 1.82
RANBP3-217ENST00000589886 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
RANBP3-217ENST00000589886 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
RANBP3-217ENST00000589886 EEA1Q15075 1411 aa26.35■■□□□ 1.81
RANBP3-217ENST00000589886 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
RANBP3-217ENST00000589886 ABCA5Q8WWZ7 1642 aa26.26■■□□□ 1.79
RANBP3-217ENST00000589886 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
RANBP3-217ENST00000589886 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.79
RANBP3-217ENST00000589886 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
RANBP3-217ENST00000589886 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
RANBP3-217ENST00000589886 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
RANBP3-217ENST00000589886 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.78
RANBP3-217ENST00000589886 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.787e-10■■■■■ 28.6
RANBP3-217ENST00000589886 CSRNP3Q8WYN3 585 aa26.13■■□□□ 1.77
RANBP3-217ENST00000589886 IGF1RP08069 1367 aa26.11■■□□□ 1.77
RANBP3-217ENST00000589886 PBRM1Q86U86 1689 aa26.11■■□□□ 1.77
RANBP3-217ENST00000589886 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
RANBP3-217ENST00000589886 FAM9AQ8IZU1 332 aaPredicted RBP26.09■■□□□ 1.77
RANBP3-217ENST00000589886 CUL7Q14999 1698 aa26.05■■□□□ 1.76
RANBP3-217ENST00000589886 PRXQ9BXM0 1461 aa26.01■■□□□ 1.75
RANBP3-217ENST00000589886 KIF21BO75037 1637 aa25.99■■□□□ 1.75
RANBP3-217ENST00000589886 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
RANBP3-217ENST00000589886 CARMIL1Q5VZK9 1371 aa25.96■■□□□ 1.75
RANBP3-217ENST00000589886 ADAMTS12P58397 1594 aa25.95■■□□□ 1.74
RANBP3-217ENST00000589886 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
RANBP3-217ENST00000589886 SNAPC4Q5SXM2 1469 aa25.93■■□□□ 1.74
RANBP3-217ENST00000589886 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
RANBP3-217ENST00000589886 GOLGA3Q08378 1498 aa25.87■■□□□ 1.73
RANBP3-217ENST00000589886 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
RANBP3-217ENST00000589886 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
RANBP3-217ENST00000589886 LOC105371045A0A1W2PR82 267 aa25.73■■□□□ 1.71
RANBP3-217ENST00000589886 CHMP7Q8WUX9 453 aaPredicted RBP25.73■■□□□ 1.71
RANBP3-217ENST00000589886 CHD1O14646 1710 aa25.69■■□□□ 1.7
RANBP3-217ENST00000589886 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
RANBP3-217ENST00000589886 UBTFP17480 764 aaKnown RBP25.66■■□□□ 1.7
RANBP3-217ENST00000589886 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.7
RANBP3-217ENST00000589886 NUP160Q12769 1436 aa25.64■■□□□ 1.7
RANBP3-217ENST00000589886 FBLN2P98095 1184 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms