RNA–Protein interactions for RNA: ENST00000589611.1

ATP5A1-209, Transcript of ATP synthase subunit alpha, mitochondrial, humanhuman

TSL 2

Gene ATP5A1, Length 995 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5A1-209ENST00000589611 NISCHQ9Y2I1 1504 aa23.17■■□□□ 1.3
ATP5A1-209ENST00000589611 CCDC180Q9P1Z9 1646 aa20.57■□□□□ 0.88
ATP5A1-209ENST00000589611 ABCC9O60706 1549 aa20.02■□□□□ 0.79
ATP5A1-209ENST00000589611 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.68
ATP5A1-209ENST00000589611 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
ATP5A1-209ENST00000589611 NACADO15069 1562 aa19.27■□□□□ 0.68
ATP5A1-209ENST00000589611 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
ATP5A1-209ENST00000589611 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
ATP5A1-209ENST00000589611 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
ATP5A1-209ENST00000589611 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
ATP5A1-209ENST00000589611 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
ATP5A1-209ENST00000589611 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
ATP5A1-209ENST00000589611 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
ATP5A1-209ENST00000589611 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATP5A1-209ENST00000589611 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
ATP5A1-209ENST00000589611 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
ATP5A1-209ENST00000589611 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
ATP5A1-209ENST00000589611 CECR2Q9BXF3 1484 aa18.05■□□□□ 0.48
ATP5A1-209ENST00000589611 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
ATP5A1-209ENST00000589611 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
ATP5A1-209ENST00000589611 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
ATP5A1-209ENST00000589611 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
ATP5A1-209ENST00000589611 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
ATP5A1-209ENST00000589611 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
ATP5A1-209ENST00000589611 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
ATP5A1-209ENST00000589611 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
ATP5A1-209ENST00000589611 WIZO95785 1651 aa17.72■□□□□ 0.43
ATP5A1-209ENST00000589611 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
ATP5A1-209ENST00000589611 BAZ1BQ9UIG0 1483 aaKnown RBP17.68■□□□□ 0.42
ATP5A1-209ENST00000589611 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
ATP5A1-209ENST00000589611 NESP48681 1621 aa17.36■□□□□ 0.37
ATP5A1-209ENST00000589611 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
ATP5A1-209ENST00000589611 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
ATP5A1-209ENST00000589611 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
ATP5A1-209ENST00000589611 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
ATP5A1-209ENST00000589611 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
ATP5A1-209ENST00000589611 CFTRP13569 1480 aa17.19■□□□□ 0.34
ATP5A1-209ENST00000589611 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
ATP5A1-209ENST00000589611 CUX2O14529 1486 aa17.18■□□□□ 0.34
ATP5A1-209ENST00000589611 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
ATP5A1-209ENST00000589611 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
ATP5A1-209ENST00000589611 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
ATP5A1-209ENST00000589611 FANCD2Q9BXW9 1451 aa17.08■□□□□ 0.32
ATP5A1-209ENST00000589611 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
ATP5A1-209ENST00000589611 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.32
ATP5A1-209ENST00000589611 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
ATP5A1-209ENST00000589611 WDR62O43379 1518 aa16.96■□□□□ 0.3
ATP5A1-209ENST00000589611 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
ATP5A1-209ENST00000589611 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.28
ATP5A1-209ENST00000589611 TOPBP1Q92547 1522 aa16.83■□□□□ 0.28
ATP5A1-209ENST00000589611 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
ATP5A1-209ENST00000589611 CUX1P39880 1505 aa16.76■□□□□ 0.27
ATP5A1-209ENST00000589611 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
ATP5A1-209ENST00000589611 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
ATP5A1-209ENST00000589611 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
ATP5A1-209ENST00000589611 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
ATP5A1-209ENST00000589611 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
ATP5A1-209ENST00000589611 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
ATP5A1-209ENST00000589611 WRNQ14191 1432 aaPredicted RBP eCLIP16.66■□□□□ 0.26
ATP5A1-209ENST00000589611 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
ATP5A1-209ENST00000589611 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
ATP5A1-209ENST00000589611 ZNF608Q9ULD9 1512 aaPredicted RBP16.62■□□□□ 0.25
ATP5A1-209ENST00000589611 SOGA1O94964 1423 aa16.6■□□□□ 0.25
ATP5A1-209ENST00000589611 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
ATP5A1-209ENST00000589611 EIF4G3O43432 1585 aaKnown RBP16.58■□□□□ 0.24
ATP5A1-209ENST00000589611 AQRO60306 1485 aaKnown RBP eCLIP16.52■□□□□ 0.23
ATP5A1-209ENST00000589611 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
ATP5A1-209ENST00000589611 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
ATP5A1-209ENST00000589611 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
ATP5A1-209ENST00000589611 PBRM1Q86U86 1689 aa16.45■□□□□ 0.22
ATP5A1-209ENST00000589611 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
ATP5A1-209ENST00000589611 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
ATP5A1-209ENST00000589611 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
ATP5A1-209ENST00000589611 CHD1O14646 1710 aa16.38■□□□□ 0.21
ATP5A1-209ENST00000589611 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
ATP5A1-209ENST00000589611 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
ATP5A1-209ENST00000589611 ERICH3Q5RHP9 1530 aa16.31■□□□□ 0.2
ATP5A1-209ENST00000589611 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
ATP5A1-209ENST00000589611 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
ATP5A1-209ENST00000589611 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
ATP5A1-209ENST00000589611 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
ATP5A1-209ENST00000589611 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
ATP5A1-209ENST00000589611 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
ATP5A1-209ENST00000589611 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
ATP5A1-209ENST00000589611 FBLN2P98095 1184 aa16.27■□□□□ 0.2
ATP5A1-209ENST00000589611 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
ATP5A1-209ENST00000589611 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
ATP5A1-209ENST00000589611 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
ATP5A1-209ENST00000589611 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
ATP5A1-209ENST00000589611 IGF1RP08069 1367 aa16.22■□□□□ 0.19
ATP5A1-209ENST00000589611 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
ATP5A1-209ENST00000589611 CUL7Q14999 1698 aa16.21■□□□□ 0.18
ATP5A1-209ENST00000589611 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
ATP5A1-209ENST00000589611 CLASP1Q7Z460 1538 aa16.16■□□□□ 0.18
ATP5A1-209ENST00000589611 CEP170Q5SW79 1584 aa16.15■□□□□ 0.18
ATP5A1-209ENST00000589611 NUP160Q12769 1436 aa16.12■□□□□ 0.17
ATP5A1-209ENST00000589611 CARMIL1Q5VZK9 1371 aa16.12■□□□□ 0.17
ATP5A1-209ENST00000589611 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
ATP5A1-209ENST00000589611 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
ATP5A1-209ENST00000589611 EEA1Q15075 1411 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms