RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
TOMM40-204ENST00000589253 ABCC9O60706 1549 aa26.24■■□□□ 1.79
TOMM40-204ENST00000589253 CCDC180Q9P1Z9 1646 aa25.97■■□□□ 1.75
TOMM40-204ENST00000589253 RB1CC1Q8TDY2 1594 aa24.89■■□□□ 1.58
TOMM40-204ENST00000589253 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
TOMM40-204ENST00000589253 NACADO15069 1562 aa24.63■■□□□ 1.53
TOMM40-204ENST00000589253 DCAF8L2P0C7V8 631 aa24.46■■□□□ 1.51
TOMM40-204ENST00000589253 PABPN1Q86U42 306 aaKnown RBP eCLIP24.36■■□□□ 1.49
TOMM40-204ENST00000589253 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
TOMM40-204ENST00000589253 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
TOMM40-204ENST00000589253 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
TOMM40-204ENST00000589253 SHROOM4Q9ULL8 1493 aa23.82■■□□□ 1.4
TOMM40-204ENST00000589253 ZCCHC6Q5VYS8 1495 aaKnown RBP23.75■■□□□ 1.39
TOMM40-204ENST00000589253 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
TOMM40-204ENST00000589253 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
TOMM40-204ENST00000589253 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
TOMM40-204ENST00000589253 SCRIBQ14160 1630 aa23.63■■□□□ 1.37
TOMM40-204ENST00000589253 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
TOMM40-204ENST00000589253 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
TOMM40-204ENST00000589253 CUX2O14529 1486 aa22.79■■□□□ 1.24
TOMM40-204ENST00000589253 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
TOMM40-204ENST00000589253 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
TOMM40-204ENST00000589253 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
TOMM40-204ENST00000589253 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
TOMM40-204ENST00000589253 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
TOMM40-204ENST00000589253 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
TOMM40-204ENST00000589253 NESP48681 1621 aa22.42■■□□□ 1.18
TOMM40-204ENST00000589253 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
TOMM40-204ENST00000589253 BAZ1AQ9NRL2 1556 aaPredicted RBP22.37■■□□□ 1.17
TOMM40-204ENST00000589253 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
TOMM40-204ENST00000589253 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
TOMM40-204ENST00000589253 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
TOMM40-204ENST00000589253 PDS5BQ9NTI5 1447 aa22.18■■□□□ 1.14
TOMM40-204ENST00000589253 KIF21AQ7Z4S6 1674 aa22.15■■□□□ 1.14
TOMM40-204ENST00000589253 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
TOMM40-204ENST00000589253 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
TOMM40-204ENST00000589253 TRIM41Q8WV44 630 aa22■■□□□ 1.11
TOMM40-204ENST00000589253 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
TOMM40-204ENST00000589253 WDR62O43379 1518 aa21.92■■□□□ 1.1
TOMM40-204ENST00000589253 WIZO95785 1651 aa21.85■■□□□ 1.09
TOMM40-204ENST00000589253 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
TOMM40-204ENST00000589253 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
TOMM40-204ENST00000589253 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
TOMM40-204ENST00000589253 CFTRP13569 1480 aa21.67■■□□□ 1.06
TOMM40-204ENST00000589253 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
TOMM40-204ENST00000589253 URB2Q14146 1524 aaKnown RBP21.57■■□□□ 1.04
TOMM40-204ENST00000589253 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
TOMM40-204ENST00000589253 PRDM2Q13029 1718 aa21.49■■□□□ 1.03
TOMM40-204ENST00000589253 RIMBP3CA6NJZ7 1639 aa21.42■■□□□ 1.02
TOMM40-204ENST00000589253 RIMBP3BA6NNM3 1639 aa21.42■■□□□ 1.02
TOMM40-204ENST00000589253 RIMBP3Q9UFD9 1639 aa21.42■■□□□ 1.02
TOMM40-204ENST00000589253 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
TOMM40-204ENST00000589253 ZNF608Q9ULD9 1512 aaPredicted RBP21.35■■□□□ 1.01
TOMM40-204ENST00000589253 ARHGEF11O15085 1522 aa21.32■■□□□ 1
TOMM40-204ENST00000589253 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
TOMM40-204ENST00000589253 TOPBP1Q92547 1522 aa21.3■■□□□ 1
TOMM40-204ENST00000589253 ABCC8Q09428 1581 aa21.3■■□□□ 1
TOMM40-204ENST00000589253 EIF4G3O43432 1585 aaKnown RBP21.27■■□□□ 1
TOMM40-204ENST00000589253 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
TOMM40-204ENST00000589253 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
TOMM40-204ENST00000589253 CHD1O14646 1710 aa21.16■□□□□ 0.98
TOMM40-204ENST00000589253 FBLN2P98095 1184 aa21.14■□□□□ 0.97
TOMM40-204ENST00000589253 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.97
TOMM40-204ENST00000589253 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
TOMM40-204ENST00000589253 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
TOMM40-204ENST00000589253 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
TOMM40-204ENST00000589253 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
TOMM40-204ENST00000589253 SOGA1O94964 1423 aa20.99■□□□□ 0.95
TOMM40-204ENST00000589253 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
TOMM40-204ENST00000589253 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
TOMM40-204ENST00000589253 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
TOMM40-204ENST00000589253 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
TOMM40-204ENST00000589253 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
TOMM40-204ENST00000589253 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
TOMM40-204ENST00000589253 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
TOMM40-204ENST00000589253 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
TOMM40-204ENST00000589253 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
TOMM40-204ENST00000589253 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
TOMM40-204ENST00000589253 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
TOMM40-204ENST00000589253 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
TOMM40-204ENST00000589253 CUX1P39880 1505 aa20.81■□□□□ 0.92
TOMM40-204ENST00000589253 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
TOMM40-204ENST00000589253 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
TOMM40-204ENST00000589253 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
TOMM40-204ENST00000589253 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.9
TOMM40-204ENST00000589253 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
TOMM40-204ENST00000589253 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
TOMM40-204ENST00000589253 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
TOMM40-204ENST00000589253 ADAMTS12P58397 1594 aa20.52■□□□□ 0.88
TOMM40-204ENST00000589253 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
TOMM40-204ENST00000589253 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
TOMM40-204ENST00000589253 NUP160Q12769 1436 aa20.49■□□□□ 0.87
TOMM40-204ENST00000589253 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
TOMM40-204ENST00000589253 SHROOM2Q13796 1616 aa20.43■□□□□ 0.86
TOMM40-204ENST00000589253 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
TOMM40-204ENST00000589253 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
TOMM40-204ENST00000589253 ERICH3Q5RHP9 1530 aa20.41■□□□□ 0.86
TOMM40-204ENST00000589253 PRG4Q92954 1404 aaPredicted RBP20.35■□□□□ 0.85
TOMM40-204ENST00000589253 KIF13AQ9H1H9 1805 aa20.33■□□□□ 0.85
TOMM40-204ENST00000589253 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms