RNA–Protein interactions for RNA: ENST00000589226.5

TNNT1-213, Transcript of troponin T1, slow skeletal type, humanhuman

TSL 2

Gene TNNT1, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT1-213ENST00000589226 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
TNNT1-213ENST00000589226 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
TNNT1-213ENST00000589226 ABCC9O60706 1549 aa28.68■■■□□ 2.18
TNNT1-213ENST00000589226 RB1CC1Q8TDY2 1594 aa27.74■■■□□ 2.03
TNNT1-213ENST00000589226 NACADO15069 1562 aa27.73■■■□□ 2.03
TNNT1-213ENST00000589226 ZCCHC6Q5VYS8 1495 aaKnown RBP27.69■■■□□ 2.02
TNNT1-213ENST00000589226 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
TNNT1-213ENST00000589226 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
TNNT1-213ENST00000589226 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
TNNT1-213ENST00000589226 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.94
TNNT1-213ENST00000589226 SCRIBQ14160 1630 aa26.89■■□□□ 1.9
TNNT1-213ENST00000589226 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
TNNT1-213ENST00000589226 PABPN1Q86U42 306 aaKnown RBP eCLIP26.72■■□□□ 1.87
TNNT1-213ENST00000589226 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
TNNT1-213ENST00000589226 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
TNNT1-213ENST00000589226 DNAJC5BQ9UF47 199 aa26.15■■□□□ 1.78
TNNT1-213ENST00000589226 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
TNNT1-213ENST00000589226 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
TNNT1-213ENST00000589226 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
TNNT1-213ENST00000589226 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
TNNT1-213ENST00000589226 SMARCA2P51531 1590 aa25.59■■□□□ 1.69
TNNT1-213ENST00000589226 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
TNNT1-213ENST00000589226 PEG3Q9GZU2 1588 aa25.55■■□□□ 1.68
TNNT1-213ENST00000589226 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
TNNT1-213ENST00000589226 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
TNNT1-213ENST00000589226 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
TNNT1-213ENST00000589226 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
TNNT1-213ENST00000589226 WIZO95785 1651 aa25.31■■□□□ 1.64
TNNT1-213ENST00000589226 RSF1Q96T23 1441 aaPredicted RBP25.26■■□□□ 1.63
TNNT1-213ENST00000589226 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
TNNT1-213ENST00000589226 LAMC3Q9Y6N6 1575 aa24.91■■□□□ 1.58
TNNT1-213ENST00000589226 NESP48681 1621 aa24.85■■□□□ 1.57
TNNT1-213ENST00000589226 CADPSQ9ULU8 1353 aa24.76■■□□□ 1.55
TNNT1-213ENST00000589226 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
TNNT1-213ENST00000589226 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
TNNT1-213ENST00000589226 KIF21AQ7Z4S6 1674 aa24.68■■□□□ 1.54
TNNT1-213ENST00000589226 PRDM2Q13029 1718 aa24.67■■□□□ 1.54
TNNT1-213ENST00000589226 CFTRP13569 1480 aa24.67■■□□□ 1.54
TNNT1-213ENST00000589226 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
TNNT1-213ENST00000589226 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
TNNT1-213ENST00000589226 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
TNNT1-213ENST00000589226 CUX2O14529 1486 aa24.51■■□□□ 1.51
TNNT1-213ENST00000589226 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
TNNT1-213ENST00000589226 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
TNNT1-213ENST00000589226 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
TNNT1-213ENST00000589226 WDR62O43379 1518 aa24.39■■□□□ 1.49
TNNT1-213ENST00000589226 URB2Q14146 1524 aaKnown RBP24.25■■□□□ 1.47
TNNT1-213ENST00000589226 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
TNNT1-213ENST00000589226 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
TNNT1-213ENST00000589226 TOPBP1Q92547 1522 aa24.13■■□□□ 1.45
TNNT1-213ENST00000589226 CUX1P39880 1505 aa23.98■■□□□ 1.43
TNNT1-213ENST00000589226 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
TNNT1-213ENST00000589226 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
TNNT1-213ENST00000589226 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
TNNT1-213ENST00000589226 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
TNNT1-213ENST00000589226 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
TNNT1-213ENST00000589226 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
TNNT1-213ENST00000589226 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.4
TNNT1-213ENST00000589226 SYNJ1O43426 1573 aa23.81■■□□□ 1.4
TNNT1-213ENST00000589226 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
TNNT1-213ENST00000589226 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
TNNT1-213ENST00000589226 WDR97A6NE52 1622 aa23.8■■□□□ 1.4
TNNT1-213ENST00000589226 SOGA1O94964 1423 aa23.77■■□□□ 1.4
TNNT1-213ENST00000589226 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
TNNT1-213ENST00000589226 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
TNNT1-213ENST00000589226 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.382e-7■■■■□ 24.3
TNNT1-213ENST00000589226 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
TNNT1-213ENST00000589226 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
TNNT1-213ENST00000589226 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
TNNT1-213ENST00000589226 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
TNNT1-213ENST00000589226 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
TNNT1-213ENST00000589226 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
TNNT1-213ENST00000589226 CHD1O14646 1710 aa23.52■■□□□ 1.36
TNNT1-213ENST00000589226 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
TNNT1-213ENST00000589226 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
TNNT1-213ENST00000589226 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
TNNT1-213ENST00000589226 SYNJ2O15056 1496 aa23.39■■□□□ 1.34
TNNT1-213ENST00000589226 OSCARQ8IYS5 282 aa23.39■■□□□ 1.33
TNNT1-213ENST00000589226 ADAMTS12P58397 1594 aa23.38■■□□□ 1.33
TNNT1-213ENST00000589226 KIF27Q86VH2 1401 aa23.33■■□□□ 1.32
TNNT1-213ENST00000589226 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
TNNT1-213ENST00000589226 FBLN2P98095 1184 aa23.27■■□□□ 1.32
TNNT1-213ENST00000589226 CUL7Q14999 1698 aa23.27■■□□□ 1.32
TNNT1-213ENST00000589226 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
TNNT1-213ENST00000589226 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
TNNT1-213ENST00000589226 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
TNNT1-213ENST00000589226 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
TNNT1-213ENST00000589226 IGF1RP08069 1367 aa23.17■■□□□ 1.3
TNNT1-213ENST00000589226 CEP170Q5SW79 1584 aa23.14■■□□□ 1.3
TNNT1-213ENST00000589226 NUP160Q12769 1436 aa23.14■■□□□ 1.29
TNNT1-213ENST00000589226 RIMBP3CA6NJZ7 1639 aa23.12■■□□□ 1.29
TNNT1-213ENST00000589226 RIMBP3BA6NNM3 1639 aa23.12■■□□□ 1.29
TNNT1-213ENST00000589226 RIMBP3Q9UFD9 1639 aa23.12■■□□□ 1.29
TNNT1-213ENST00000589226 ARHGEF11O15085 1522 aa23.1■■□□□ 1.29
TNNT1-213ENST00000589226 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.29
TNNT1-213ENST00000589226 CARMIL1Q5VZK9 1371 aa23.04■■□□□ 1.28
TNNT1-213ENST00000589226 SHROOM2Q13796 1616 aa23.04■■□□□ 1.28
TNNT1-213ENST00000589226 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
TNNT1-213ENST00000589226 EEA1Q15075 1411 aa22.98■■□□□ 1.27
TNNT1-213ENST00000589226 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms