RNA–Protein interactions for RNA: ENST00000588671.2

PCSK4-208, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-208ENST00000588671 NISCHQ9Y2I1 1504 aa40.1■■■■■ 4.01
PCSK4-208ENST00000588671 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
PCSK4-208ENST00000588671 ABCC9O60706 1549 aa35.61■■■■□ 3.29
PCSK4-208ENST00000588671 RB1CC1Q8TDY2 1594 aa34.02■■■■□ 3.04
PCSK4-208ENST00000588671 NACADO15069 1562 aa33.85■■■■□ 3.01
PCSK4-208ENST00000588671 DCAF8L2P0C7V8 631 aa33.74■■■□□ 2.99
PCSK4-208ENST00000588671 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
PCSK4-208ENST00000588671 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
PCSK4-208ENST00000588671 ZCCHC6Q5VYS8 1495 aaKnown RBP33.3■■■□□ 2.92
PCSK4-208ENST00000588671 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
PCSK4-208ENST00000588671 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
PCSK4-208ENST00000588671 DCAF1Q9Y4B6 1507 aa33.14■■■□□ 2.9
PCSK4-208ENST00000588671 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
PCSK4-208ENST00000588671 SCRIBQ14160 1630 aa32.72■■■□□ 2.83
PCSK4-208ENST00000588671 SHROOM4Q9ULL8 1493 aa32.6■■■□□ 2.81
PCSK4-208ENST00000588671 CC2D2AQ9P2K1 1620 aa32.21■■■□□ 2.75
PCSK4-208ENST00000588671 EIF4G1Q04637 1599 aaKnown RBP32.19■■■□□ 2.74
PCSK4-208ENST00000588671 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
PCSK4-208ENST00000588671 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
PCSK4-208ENST00000588671 NCAPD3P42695 1498 aa31.23■■■□□ 2.59
PCSK4-208ENST00000588671 ATAD2BQ9ULI0 1458 aa31.19■■■□□ 2.58
PCSK4-208ENST00000588671 SMARCA2P51531 1590 aa31.12■■■□□ 2.57
PCSK4-208ENST00000588671 BAZ1AQ9NRL2 1556 aaPredicted RBP31.11■■■□□ 2.57
PCSK4-208ENST00000588671 HMGXB3Q12766 1538 aa31.05■■■□□ 2.56
PCSK4-208ENST00000588671 PEG3Q9GZU2 1588 aa30.93■■■□□ 2.54
PCSK4-208ENST00000588671 MROH2BQ7Z745 1585 aa30.91■■■□□ 2.54
PCSK4-208ENST00000588671 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.54
PCSK4-208ENST00000588671 ERCC6Q03468 1493 aa30.71■■■□□ 2.51
PCSK4-208ENST00000588671 NESP48681 1621 aa30.67■■■□□ 2.5
PCSK4-208ENST00000588671 CUX2O14529 1486 aa30.59■■■□□ 2.49
PCSK4-208ENST00000588671 WIZO95785 1651 aa30.56■■■□□ 2.48
PCSK4-208ENST00000588671 LAMC3Q9Y6N6 1575 aa30.51■■■□□ 2.47
PCSK4-208ENST00000588671 RSF1Q96T23 1441 aaPredicted RBP30.39■■■□□ 2.45
PCSK4-208ENST00000588671 THOC2Q8NI27 1593 aaKnown RBP30.35■■■□□ 2.45
PCSK4-208ENST00000588671 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
PCSK4-208ENST00000588671 PDS5BQ9NTI5 1447 aa30.3■■■□□ 2.44
PCSK4-208ENST00000588671 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
PCSK4-208ENST00000588671 DNAJC5Q9H3Z4 198 aa30.24■■■□□ 2.43
PCSK4-208ENST00000588671 TOP2AP11388 1531 aaKnown RBP30.18■■■□□ 2.42
PCSK4-208ENST00000588671 MRC2Q9UBG0 1479 aa30.04■■■□□ 2.4
PCSK4-208ENST00000588671 CFTRP13569 1480 aa30.01■■■□□ 2.4
PCSK4-208ENST00000588671 WDR62O43379 1518 aa29.97■■■□□ 2.39
PCSK4-208ENST00000588671 CEP164Q9UPV0 1460 aa29.97■■■□□ 2.39
PCSK4-208ENST00000588671 FANCD2Q9BXW9 1451 aa29.96■■■□□ 2.39
PCSK4-208ENST00000588671 CCDC88BA6NC98 1476 aa29.83■■■□□ 2.37
PCSK4-208ENST00000588671 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
PCSK4-208ENST00000588671 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
PCSK4-208ENST00000588671 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
PCSK4-208ENST00000588671 TOPBP1Q92547 1522 aa29.43■■■□□ 2.3
PCSK4-208ENST00000588671 ABCC8Q09428 1581 aa29.4■■■□□ 2.3
PCSK4-208ENST00000588671 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
PCSK4-208ENST00000588671 DNMBPQ6XZF7 1577 aa29.35■■■□□ 2.29
PCSK4-208ENST00000588671 ZNF608Q9ULD9 1512 aaPredicted RBP29.29■■■□□ 2.28
PCSK4-208ENST00000588671 OSCARQ8IYS5 282 aa29.19■■■□□ 2.26
PCSK4-208ENST00000588671 EIF4G3O43432 1585 aaKnown RBP29.17■■■□□ 2.26
PCSK4-208ENST00000588671 TARBP1Q13395 1621 aaKnown RBP29.16■■■□□ 2.26
PCSK4-208ENST00000588671 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
PCSK4-208ENST00000588671 AQRO60306 1485 aaKnown RBP eCLIP29.05■■■□□ 2.24
PCSK4-208ENST00000588671 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
PCSK4-208ENST00000588671 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
PCSK4-208ENST00000588671 CUX1P39880 1505 aa29.03■■■□□ 2.24
PCSK4-208ENST00000588671 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
PCSK4-208ENST00000588671 SOGA1O94964 1423 aa29■■■□□ 2.23
PCSK4-208ENST00000588671 CHD1O14646 1710 aa28.91■■■□□ 2.22
PCSK4-208ENST00000588671 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
PCSK4-208ENST00000588671 WDR97A6NE52 1622 aa28.89■■■□□ 2.22
PCSK4-208ENST00000588671 RIMBP3CA6NJZ7 1639 aa28.85■■■□□ 2.21
PCSK4-208ENST00000588671 RIMBP3BA6NNM3 1639 aa28.85■■■□□ 2.21
PCSK4-208ENST00000588671 RIMBP3Q9UFD9 1639 aa28.85■■■□□ 2.21
PCSK4-208ENST00000588671 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
PCSK4-208ENST00000588671 FBLN2P98095 1184 aa28.77■■■□□ 2.2
PCSK4-208ENST00000588671 ARHGEF11O15085 1522 aa28.77■■■□□ 2.2
PCSK4-208ENST00000588671 WRNQ14191 1432 aaPredicted RBP eCLIP28.73■■■□□ 2.19
PCSK4-208ENST00000588671 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
PCSK4-208ENST00000588671 MAGI1Q96QZ7 1491 aaPredicted RBP28.71■■■□□ 2.19
PCSK4-208ENST00000588671 ABCA10Q8WWZ4 1543 aa28.69■■■□□ 2.18
PCSK4-208ENST00000588671 PBRM1Q86U86 1689 aa28.68■■■□□ 2.18
PCSK4-208ENST00000588671 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
PCSK4-208ENST00000588671 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
PCSK4-208ENST00000588671 BIVM-ERCC5R4GMW8 1640 aa28.65■■■□□ 2.18
PCSK4-208ENST00000588671 TOP2BQ02880 1626 aa28.63■■■□□ 2.17
PCSK4-208ENST00000588671 CHMP7Q8WUX9 453 aaPredicted RBP28.62■■■□□ 2.17
PCSK4-208ENST00000588671 SYNJ1O43426 1573 aa28.61■■■□□ 2.17
PCSK4-208ENST00000588671 SYNJ2O15056 1496 aa28.6■■■□□ 2.17
PCSK4-208ENST00000588671 CLASP1Q7Z460 1538 aa28.58■■■□□ 2.17
PCSK4-208ENST00000588671 ARAP1Q96P48 1450 aa28.51■■■□□ 2.15
PCSK4-208ENST00000588671 CYB5RLQ6IPT4 315 aa28.5■■■□□ 2.15
PCSK4-208ENST00000588671 ADAMTS12P58397 1594 aa28.41■■■□□ 2.14
PCSK4-208ENST00000588671 GRIN2AQ12879 1464 aa28.36■■■□□ 2.13
PCSK4-208ENST00000588671 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
PCSK4-208ENST00000588671 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
PCSK4-208ENST00000588671 CEP170Q5SW79 1584 aa28.27■■■□□ 2.12
PCSK4-208ENST00000588671 NUP160Q12769 1436 aa28.26■■■□□ 2.11
PCSK4-208ENST00000588671 KIF27Q86VH2 1401 aa28.21■■■□□ 2.11
PCSK4-208ENST00000588671 ERCC6L2Q5T890 1561 aa28.16■■■□□ 2.1
PCSK4-208ENST00000588671 SHROOM2Q13796 1616 aa28.13■■■□□ 2.09
PCSK4-208ENST00000588671 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
PCSK4-208ENST00000588671 IGF1RP08069 1367 aa28.07■■■□□ 2.08
PCSK4-208ENST00000588671 RUSC2Q8N2Y8 1516 aa28■■■□□ 2.07
PCSK4-208ENST00000588671 CUL7Q14999 1698 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms