RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
SUGP1-208ENST00000588580 ABCC9O60706 1549 aa34.87■■■■□ 3.17
SUGP1-208ENST00000588580 CCDC180Q9P1Z9 1646 aa33.96■■■■□ 3.03
SUGP1-208ENST00000588580 DNAJC5BQ9UF47 199 aa33.54■■■□□ 2.96
SUGP1-208ENST00000588580 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.84
SUGP1-208ENST00000588580 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
SUGP1-208ENST00000588580 NACADO15069 1562 aa32.36■■■□□ 2.77
SUGP1-208ENST00000588580 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
SUGP1-208ENST00000588580 UNC13AQ9UPW8 1703 aa32.01■■■□□ 2.72
SUGP1-208ENST00000588580 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
SUGP1-208ENST00000588580 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
SUGP1-208ENST00000588580 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
SUGP1-208ENST00000588580 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
SUGP1-208ENST00000588580 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
SUGP1-208ENST00000588580 CC2D2AQ9P2K1 1620 aa31.41■■■□□ 2.62
SUGP1-208ENST00000588580 DNAJC5Q9H3Z4 198 aa31.3■■■□□ 2.6
SUGP1-208ENST00000588580 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
SUGP1-208ENST00000588580 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
SUGP1-208ENST00000588580 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
SUGP1-208ENST00000588580 CUX2O14529 1486 aa30.29■■■□□ 2.44
SUGP1-208ENST00000588580 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
SUGP1-208ENST00000588580 NCAPD3P42695 1498 aa29.95■■■□□ 2.39
SUGP1-208ENST00000588580 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.35
SUGP1-208ENST00000588580 NESP48681 1621 aa29.76■■■□□ 2.35
SUGP1-208ENST00000588580 TRIM41Q8WV44 630 aa29.61■■■□□ 2.33
SUGP1-208ENST00000588580 HMGXB3Q12766 1538 aa29.56■■■□□ 2.32
SUGP1-208ENST00000588580 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
SUGP1-208ENST00000588580 THOC2Q8NI27 1593 aaKnown RBP29.49■■■□□ 2.31
SUGP1-208ENST00000588580 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
SUGP1-208ENST00000588580 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
SUGP1-208ENST00000588580 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
SUGP1-208ENST00000588580 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
SUGP1-208ENST00000588580 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
SUGP1-208ENST00000588580 PDS5BQ9NTI5 1447 aa29.24■■■□□ 2.27
SUGP1-208ENST00000588580 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
SUGP1-208ENST00000588580 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
SUGP1-208ENST00000588580 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
SUGP1-208ENST00000588580 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
SUGP1-208ENST00000588580 MRC2Q9UBG0 1479 aa29■■■□□ 2.23
SUGP1-208ENST00000588580 WIZO95785 1651 aa28.96■■■□□ 2.23
SUGP1-208ENST00000588580 WDR62O43379 1518 aa28.93■■■□□ 2.22
SUGP1-208ENST00000588580 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
SUGP1-208ENST00000588580 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
SUGP1-208ENST00000588580 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
SUGP1-208ENST00000588580 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
SUGP1-208ENST00000588580 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
SUGP1-208ENST00000588580 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
SUGP1-208ENST00000588580 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
SUGP1-208ENST00000588580 CFTRP13569 1480 aa28.5■■■□□ 2.15
SUGP1-208ENST00000588580 URB2Q14146 1524 aaKnown RBP28.49■■■□□ 2.15
SUGP1-208ENST00000588580 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
SUGP1-208ENST00000588580 ARHGEF11O15085 1522 aa28.35■■■□□ 2.13
SUGP1-208ENST00000588580 CYB5RLQ6IPT4 315 aa28.33■■■□□ 2.13
SUGP1-208ENST00000588580 ZNF608Q9ULD9 1512 aaPredicted RBP28.28■■■□□ 2.12
SUGP1-208ENST00000588580 CCDC88BA6NC98 1476 aa28.28■■■□□ 2.12
SUGP1-208ENST00000588580 TRHP20396 242 aaPredicted RBP28.23■■■□□ 2.11
SUGP1-208ENST00000588580 IFT140Q96RY7 1462 aa28.2■■■□□ 2.1
SUGP1-208ENST00000588580 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
SUGP1-208ENST00000588580 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
SUGP1-208ENST00000588580 TOPBP1Q92547 1522 aa28.03■■■□□ 2.08
SUGP1-208ENST00000588580 EIF4G3O43432 1585 aaKnown RBP27.98■■■□□ 2.07
SUGP1-208ENST00000588580 FBLN2P98095 1184 aa27.97■■■□□ 2.07
SUGP1-208ENST00000588580 AQRO60306 1485 aaKnown RBP eCLIP27.96■■■□□ 2.072e-6■■■■□ 22.5
SUGP1-208ENST00000588580 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
SUGP1-208ENST00000588580 CHD1O14646 1710 aa27.92■■■□□ 2.06
SUGP1-208ENST00000588580 ABCC8Q09428 1581 aa27.89■■■□□ 2.05
SUGP1-208ENST00000588580 TARBP1Q13395 1621 aaKnown RBP27.81■■■□□ 2.04
SUGP1-208ENST00000588580 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
SUGP1-208ENST00000588580 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.02
SUGP1-208ENST00000588580 TDRD9Q8NDG6 1382 aaKnown RBP27.69■■■□□ 2.02
SUGP1-208ENST00000588580 RAD54L2Q9Y4B4 1467 aa27.67■■■□□ 2.02
SUGP1-208ENST00000588580 CLASP1Q7Z460 1538 aa27.62■■■□□ 2.01
SUGP1-208ENST00000588580 SOGA1O94964 1423 aa27.61■■■□□ 2.01
SUGP1-208ENST00000588580 CHMP7Q8WUX9 453 aaPredicted RBP27.61■■■□□ 2.01
SUGP1-208ENST00000588580 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
SUGP1-208ENST00000588580 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
SUGP1-208ENST00000588580 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
SUGP1-208ENST00000588580 GAPVD1Q14C86 1478 aa27.42■■□□□ 1.98
SUGP1-208ENST00000588580 CUX1P39880 1505 aa27.41■■□□□ 1.98
SUGP1-208ENST00000588580 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
SUGP1-208ENST00000588580 GRIN2BQ13224 1484 aa27.4■■□□□ 1.98
SUGP1-208ENST00000588580 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
SUGP1-208ENST00000588580 WDR97A6NE52 1622 aa27.38■■□□□ 1.97
SUGP1-208ENST00000588580 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
SUGP1-208ENST00000588580 WRNQ14191 1432 aaPredicted RBP eCLIP27.32■■□□□ 1.96
SUGP1-208ENST00000588580 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
SUGP1-208ENST00000588580 ERCC6L2Q5T890 1561 aa27.2■■□□□ 1.94
SUGP1-208ENST00000588580 PBRM1Q86U86 1689 aa27.16■■□□□ 1.94
SUGP1-208ENST00000588580 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
SUGP1-208ENST00000588580 GRIN2AQ12879 1464 aa27.04■■□□□ 1.92
SUGP1-208ENST00000588580 CEP170Q5SW79 1584 aa27.04■■□□□ 1.92
SUGP1-208ENST00000588580 ABCA5Q8WWZ7 1642 aa27.03■■□□□ 1.92
SUGP1-208ENST00000588580 NUP160Q12769 1436 aa26.99■■□□□ 1.91
SUGP1-208ENST00000588580 KIF13AQ9H1H9 1805 aa26.98■■□□□ 1.91
SUGP1-208ENST00000588580 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
SUGP1-208ENST00000588580 FAM69CQ0P6D2 419 aa26.9■■□□□ 1.9
SUGP1-208ENST00000588580 KDM4FA0A1W2PPD8 638 aa26.88■■□□□ 1.89
SUGP1-208ENST00000588580 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
SUGP1-208ENST00000588580 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
SUGP1-208ENST00000588580 FHAD1B1AJZ9 1412 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms