RNA–Protein interactions for RNA: ENST00000588533.5

MARK4-204, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 2

Gene MARK4, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-204ENST00000588533 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
MARK4-204ENST00000588533 CCDC180Q9P1Z9 1646 aa19.6■□□□□ 0.73
MARK4-204ENST00000588533 ABCC9O60706 1549 aa19.17■□□□□ 0.66
MARK4-204ENST00000588533 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
MARK4-204ENST00000588533 NACADO15069 1562 aa18.32■□□□□ 0.52
MARK4-204ENST00000588533 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
MARK4-204ENST00000588533 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
MARK4-204ENST00000588533 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
MARK4-204ENST00000588533 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
MARK4-204ENST00000588533 DCAF1Q9Y4B6 1507 aa17.99■□□□□ 0.47
MARK4-204ENST00000588533 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
MARK4-204ENST00000588533 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
MARK4-204ENST00000588533 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
MARK4-204ENST00000588533 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
MARK4-204ENST00000588533 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
MARK4-204ENST00000588533 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
MARK4-204ENST00000588533 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
MARK4-204ENST00000588533 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
MARK4-204ENST00000588533 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
MARK4-204ENST00000588533 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
MARK4-204ENST00000588533 SMARCA2P51531 1590 aa16.91■□□□□ 0.3
MARK4-204ENST00000588533 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
MARK4-204ENST00000588533 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
MARK4-204ENST00000588533 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
MARK4-204ENST00000588533 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
MARK4-204ENST00000588533 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
MARK4-204ENST00000588533 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
MARK4-204ENST00000588533 WIZO95785 1651 aa16.74■□□□□ 0.27
MARK4-204ENST00000588533 ERCC6Q03468 1493 aa16.58■□□□□ 0.24
MARK4-204ENST00000588533 NESP48681 1621 aa16.54■□□□□ 0.24
MARK4-204ENST00000588533 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
MARK4-204ENST00000588533 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
MARK4-204ENST00000588533 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
MARK4-204ENST00000588533 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
MARK4-204ENST00000588533 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
MARK4-204ENST00000588533 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
MARK4-204ENST00000588533 CUX2O14529 1486 aa16.35■□□□□ 0.21
MARK4-204ENST00000588533 PDS5BQ9NTI5 1447 aa16.32■□□□□ 0.2
MARK4-204ENST00000588533 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
MARK4-204ENST00000588533 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
MARK4-204ENST00000588533 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
MARK4-204ENST00000588533 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
MARK4-204ENST00000588533 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
MARK4-204ENST00000588533 CFTRP13569 1480 aa16.21■□□□□ 0.19
MARK4-204ENST00000588533 WDR62O43379 1518 aa16.19■□□□□ 0.18
MARK4-204ENST00000588533 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
MARK4-204ENST00000588533 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
MARK4-204ENST00000588533 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
MARK4-204ENST00000588533 TOPBP1Q92547 1522 aa15.96■□□□□ 0.15
MARK4-204ENST00000588533 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
MARK4-204ENST00000588533 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
MARK4-204ENST00000588533 IFT140Q96RY7 1462 aa15.86■□□□□ 0.13
MARK4-204ENST00000588533 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
MARK4-204ENST00000588533 CUX1P39880 1505 aa15.81■□□□□ 0.12
MARK4-204ENST00000588533 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
MARK4-204ENST00000588533 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
MARK4-204ENST00000588533 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
MARK4-204ENST00000588533 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
MARK4-204ENST00000588533 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
MARK4-204ENST00000588533 CHD1O14646 1710 aa15.77■□□□□ 0.11
MARK4-204ENST00000588533 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
MARK4-204ENST00000588533 BIVM-ERCC5R4GMW8 1640 aa15.74■□□□□ 0.11
MARK4-204ENST00000588533 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
MARK4-204ENST00000588533 SYNJ1O43426 1573 aa15.7■□□□□ 0.1
MARK4-204ENST00000588533 SOGA1O94964 1423 aa15.68■□□□□ 0.1
MARK4-204ENST00000588533 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
MARK4-204ENST00000588533 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■■■■■ 26.9
MARK4-204ENST00000588533 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
MARK4-204ENST00000588533 ABCA5Q8WWZ7 1642 aa15.64■□□□□ 0.09
MARK4-204ENST00000588533 SNAPC4Q5SXM2 1469 aa15.61■□□□□ 0.09
MARK4-204ENST00000588533 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
MARK4-204ENST00000588533 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.08
MARK4-204ENST00000588533 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
MARK4-204ENST00000588533 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
MARK4-204ENST00000588533 MAGI1Q96QZ7 1491 aaPredicted RBP15.55■□□□□ 0.08
MARK4-204ENST00000588533 FBLN2P98095 1184 aa15.53■□□□□ 0.08
MARK4-204ENST00000588533 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
MARK4-204ENST00000588533 RIMBP3CA6NJZ7 1639 aa15.52■□□□□ 0.08
MARK4-204ENST00000588533 RIMBP3BA6NNM3 1639 aa15.52■□□□□ 0.08
MARK4-204ENST00000588533 RIMBP3Q9UFD9 1639 aa15.52■□□□□ 0.08
MARK4-204ENST00000588533 ADAMTS12P58397 1594 aa15.52■□□□□ 0.07
MARK4-204ENST00000588533 SYNJ2O15056 1496 aa15.47■□□□□ 0.07
MARK4-204ENST00000588533 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
MARK4-204ENST00000588533 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
MARK4-204ENST00000588533 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
MARK4-204ENST00000588533 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
MARK4-204ENST00000588533 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
MARK4-204ENST00000588533 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
MARK4-204ENST00000588533 CUL7Q14999 1698 aa15.38■□□□□ 0.05
MARK4-204ENST00000588533 CEP170Q5SW79 1584 aa15.36■□□□□ 0.05
MARK4-204ENST00000588533 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
MARK4-204ENST00000588533 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
MARK4-204ENST00000588533 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
MARK4-204ENST00000588533 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
MARK4-204ENST00000588533 NUP160Q12769 1436 aa15.26■□□□□ 0.03
MARK4-204ENST00000588533 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
MARK4-204ENST00000588533 ERCC6L2Q5T890 1561 aa15.22■□□□□ 0.03
MARK4-204ENST00000588533 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
MARK4-204ENST00000588533 CYB5RLQ6IPT4 315 aa15.18■□□□□ 0.02
MARK4-204ENST00000588533 IGF1RP08069 1367 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms