RNA–Protein interactions for RNA: ENST00000588118.5

DNMT1-214, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-214ENST00000588118 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.62
DNMT1-214ENST00000588118 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
DNMT1-214ENST00000588118 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.81
DNMT1-214ENST00000588118 ABCC9O60706 1549 aa26.09■■□□□ 1.77
DNMT1-214ENST00000588118 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
DNMT1-214ENST00000588118 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
DNMT1-214ENST00000588118 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
DNMT1-214ENST00000588118 NACADO15069 1562 aa25.71■■□□□ 1.71
DNMT1-214ENST00000588118 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
DNMT1-214ENST00000588118 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
DNMT1-214ENST00000588118 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
DNMT1-214ENST00000588118 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
DNMT1-214ENST00000588118 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
DNMT1-214ENST00000588118 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
DNMT1-214ENST00000588118 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
DNMT1-214ENST00000588118 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
DNMT1-214ENST00000588118 SUPT5HO00267 1087 aaKnown RBP24.26■■□□□ 1.47
DNMT1-214ENST00000588118 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
DNMT1-214ENST00000588118 MROH2BQ7Z745 1585 aa24.19■■□□□ 1.46
DNMT1-214ENST00000588118 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
DNMT1-214ENST00000588118 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
DNMT1-214ENST00000588118 WIZO95785 1651 aa23.95■■□□□ 1.43
DNMT1-214ENST00000588118 PEG3Q9GZU2 1588 aa23.93■■□□□ 1.42
DNMT1-214ENST00000588118 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
DNMT1-214ENST00000588118 ATAD2BQ9ULI0 1458 aa23.82■■□□□ 1.4
DNMT1-214ENST00000588118 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
DNMT1-214ENST00000588118 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
DNMT1-214ENST00000588118 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
DNMT1-214ENST00000588118 HMGXB3Q12766 1538 aa23.66■■□□□ 1.38
DNMT1-214ENST00000588118 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.38
DNMT1-214ENST00000588118 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
DNMT1-214ENST00000588118 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
DNMT1-214ENST00000588118 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
DNMT1-214ENST00000588118 CFTRP13569 1480 aa23.1■■□□□ 1.29
DNMT1-214ENST00000588118 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
DNMT1-214ENST00000588118 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
DNMT1-214ENST00000588118 LAMC3Q9Y6N6 1575 aa22.94■■□□□ 1.26
DNMT1-214ENST00000588118 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
DNMT1-214ENST00000588118 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
DNMT1-214ENST00000588118 WRNQ14191 1432 aaPredicted RBP eCLIP22.85■■□□□ 1.25
DNMT1-214ENST00000588118 NESP48681 1621 aa22.81■■□□□ 1.24
DNMT1-214ENST00000588118 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
DNMT1-214ENST00000588118 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
DNMT1-214ENST00000588118 SYNJ1O43426 1573 aa22.7■■□□□ 1.22
DNMT1-214ENST00000588118 TOP2BQ02880 1626 aa22.69■■□□□ 1.22
DNMT1-214ENST00000588118 CEP164Q9UPV0 1460 aa22.69■■□□□ 1.22
DNMT1-214ENST00000588118 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
DNMT1-214ENST00000588118 CUX1P39880 1505 aa22.64■■□□□ 1.21
DNMT1-214ENST00000588118 DNMBPQ6XZF7 1577 aa22.57■■□□□ 1.2
DNMT1-214ENST00000588118 KIF21AQ7Z4S6 1674 aa22.56■■□□□ 1.2
DNMT1-214ENST00000588118 EEA1Q15075 1411 aa22.51■■□□□ 1.19
DNMT1-214ENST00000588118 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
DNMT1-214ENST00000588118 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
DNMT1-214ENST00000588118 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
DNMT1-214ENST00000588118 ERCC6Q03468 1493 aa22.46■■□□□ 1.19
DNMT1-214ENST00000588118 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
DNMT1-214ENST00000588118 SOGA1O94964 1423 aa22.41■■□□□ 1.18
DNMT1-214ENST00000588118 FAM9AQ8IZU1 332 aaPredicted RBP22.38■■□□□ 1.17
DNMT1-214ENST00000588118 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
DNMT1-214ENST00000588118 WDR62O43379 1518 aa22.36■■□□□ 1.17
DNMT1-214ENST00000588118 KIF27Q86VH2 1401 aa22.33■■□□□ 1.17
DNMT1-214ENST00000588118 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
DNMT1-214ENST00000588118 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
DNMT1-214ENST00000588118 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
DNMT1-214ENST00000588118 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
DNMT1-214ENST00000588118 CUX2O14529 1486 aa22.27■■□□□ 1.16
DNMT1-214ENST00000588118 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
DNMT1-214ENST00000588118 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
DNMT1-214ENST00000588118 IFT140Q96RY7 1462 aa22.19■■□□□ 1.14
DNMT1-214ENST00000588118 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
DNMT1-214ENST00000588118 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
DNMT1-214ENST00000588118 KIF21BO75037 1637 aa22.15■■□□□ 1.14
DNMT1-214ENST00000588118 GOLGA3Q08378 1498 aa22.12■■□□□ 1.13
DNMT1-214ENST00000588118 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
DNMT1-214ENST00000588118 IGF1RP08069 1367 aa22.09■■□□□ 1.13
DNMT1-214ENST00000588118 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
DNMT1-214ENST00000588118 GAPVD1Q14C86 1478 aa22.08■■□□□ 1.12
DNMT1-214ENST00000588118 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
DNMT1-214ENST00000588118 TDRD9Q8NDG6 1382 aaKnown RBP22.06■■□□□ 1.12
DNMT1-214ENST00000588118 CUL7Q14999 1698 aa22.01■■□□□ 1.11
DNMT1-214ENST00000588118 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
DNMT1-214ENST00000588118 TNIKQ9UKE5 1360 aa22■■□□□ 1.11
DNMT1-214ENST00000588118 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
DNMT1-214ENST00000588118 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
DNMT1-214ENST00000588118 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
DNMT1-214ENST00000588118 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
DNMT1-214ENST00000588118 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.13e-10■■■■■ 29.5
DNMT1-214ENST00000588118 ZNF608Q9ULD9 1512 aaPredicted RBP21.95■■□□□ 1.1
DNMT1-214ENST00000588118 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
DNMT1-214ENST00000588118 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
DNMT1-214ENST00000588118 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
DNMT1-214ENST00000588118 ADAMTS12P58397 1594 aa21.83■■□□□ 1.09
DNMT1-214ENST00000588118 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
DNMT1-214ENST00000588118 CEP162Q5TB80 1403 aa21.81■■□□□ 1.08
DNMT1-214ENST00000588118 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
DNMT1-214ENST00000588118 CLIP1P30622 1438 aa21.72■■□□□ 1.07
DNMT1-214ENST00000588118 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
DNMT1-214ENST00000588118 CTTNBP2Q8WZ74 1663 aa21.68■■□□□ 1.06
DNMT1-214ENST00000588118 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
DNMT1-214ENST00000588118 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms