RNA–Protein interactions for RNA: ENST00000588027.5

LINC00662-204, long intergenic non-protein coding RNA 662, humanhuman

TSL 5 BASIC

Gene LINC00662, Length 562 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-204ENST00000588027 NISCHQ9Y2I1 1504 aa30.18■■■□□ 2.42
LINC00662-204ENST00000588027 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
LINC00662-204ENST00000588027 ABCC9O60706 1549 aa26.88■■□□□ 1.89
LINC00662-204ENST00000588027 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
LINC00662-204ENST00000588027 NACADO15069 1562 aa25.58■■□□□ 1.69
LINC00662-204ENST00000588027 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
LINC00662-204ENST00000588027 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
LINC00662-204ENST00000588027 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
LINC00662-204ENST00000588027 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
LINC00662-204ENST00000588027 DCAF1Q9Y4B6 1507 aa25■■□□□ 1.59
LINC00662-204ENST00000588027 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
LINC00662-204ENST00000588027 DNAJC5BQ9UF47 199 aa24.95■■□□□ 1.58
LINC00662-204ENST00000588027 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
LINC00662-204ENST00000588027 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
LINC00662-204ENST00000588027 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
LINC00662-204ENST00000588027 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
LINC00662-204ENST00000588027 CC2D2AQ9P2K1 1620 aa24.32■■□□□ 1.48
LINC00662-204ENST00000588027 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
LINC00662-204ENST00000588027 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
LINC00662-204ENST00000588027 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
LINC00662-204ENST00000588027 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
LINC00662-204ENST00000588027 ATAD2BQ9ULI0 1458 aa23.5■■□□□ 1.35
LINC00662-204ENST00000588027 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
LINC00662-204ENST00000588027 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
LINC00662-204ENST00000588027 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
LINC00662-204ENST00000588027 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
LINC00662-204ENST00000588027 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
LINC00662-204ENST00000588027 CUX2O14529 1486 aa23.22■■□□□ 1.31
LINC00662-204ENST00000588027 MROH2BQ7Z745 1585 aa23.22■■□□□ 1.31
LINC00662-204ENST00000588027 NESP48681 1621 aa23.09■■□□□ 1.29
LINC00662-204ENST00000588027 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
LINC00662-204ENST00000588027 WIZO95785 1651 aa22.94■■□□□ 1.26
LINC00662-204ENST00000588027 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
LINC00662-204ENST00000588027 PDS5BQ9NTI5 1447 aa22.92■■□□□ 1.26
LINC00662-204ENST00000588027 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
LINC00662-204ENST00000588027 CADPSQ9ULU8 1353 aa22.86■■□□□ 1.25
LINC00662-204ENST00000588027 KIF21AQ7Z4S6 1674 aa22.85■■□□□ 1.25
LINC00662-204ENST00000588027 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
LINC00662-204ENST00000588027 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
LINC00662-204ENST00000588027 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
LINC00662-204ENST00000588027 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
LINC00662-204ENST00000588027 WDR62O43379 1518 aa22.66■■□□□ 1.22
LINC00662-204ENST00000588027 CFTRP13569 1480 aa22.63■■□□□ 1.21
LINC00662-204ENST00000588027 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
LINC00662-204ENST00000588027 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
LINC00662-204ENST00000588027 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
LINC00662-204ENST00000588027 URB2Q14146 1524 aaKnown RBP22.38■■□□□ 1.17
LINC00662-204ENST00000588027 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
LINC00662-204ENST00000588027 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
LINC00662-204ENST00000588027 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
LINC00662-204ENST00000588027 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
LINC00662-204ENST00000588027 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
LINC00662-204ENST00000588027 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
LINC00662-204ENST00000588027 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
LINC00662-204ENST00000588027 SUPT5HO00267 1087 aaKnown RBP21.99■■□□□ 1.11
LINC00662-204ENST00000588027 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
LINC00662-204ENST00000588027 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
LINC00662-204ENST00000588027 TARBP1Q13395 1621 aaKnown RBP21.96■■□□□ 1.11
LINC00662-204ENST00000588027 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
LINC00662-204ENST00000588027 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.09
LINC00662-204ENST00000588027 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
LINC00662-204ENST00000588027 SOGA1O94964 1423 aa21.85■■□□□ 1.09
LINC00662-204ENST00000588027 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
LINC00662-204ENST00000588027 CUX1P39880 1505 aa21.83■■□□□ 1.09
LINC00662-204ENST00000588027 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
LINC00662-204ENST00000588027 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
LINC00662-204ENST00000588027 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
LINC00662-204ENST00000588027 CHD1O14646 1710 aa21.8■■□□□ 1.08
LINC00662-204ENST00000588027 ARHGEF11O15085 1522 aa21.77■■□□□ 1.08
LINC00662-204ENST00000588027 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
LINC00662-204ENST00000588027 SNAPC4Q5SXM2 1469 aa21.72■■□□□ 1.07
LINC00662-204ENST00000588027 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
LINC00662-204ENST00000588027 FBLN2P98095 1184 aa21.71■■□□□ 1.07
LINC00662-204ENST00000588027 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
LINC00662-204ENST00000588027 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
LINC00662-204ENST00000588027 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
LINC00662-204ENST00000588027 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
LINC00662-204ENST00000588027 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
LINC00662-204ENST00000588027 GAPVD1Q14C86 1478 aa21.61■■□□□ 1.05
LINC00662-204ENST00000588027 ABCA5Q8WWZ7 1642 aa21.6■■□□□ 1.05
LINC00662-204ENST00000588027 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
LINC00662-204ENST00000588027 CLASP1Q7Z460 1538 aa21.58■■□□□ 1.04
LINC00662-204ENST00000588027 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
LINC00662-204ENST00000588027 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
LINC00662-204ENST00000588027 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
LINC00662-204ENST00000588027 ARAP1Q96P48 1450 aa21.55■■□□□ 1.04
LINC00662-204ENST00000588027 CYB5RLQ6IPT4 315 aa21.51■■□□□ 1.03
LINC00662-204ENST00000588027 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
LINC00662-204ENST00000588027 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
LINC00662-204ENST00000588027 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.01
LINC00662-204ENST00000588027 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
LINC00662-204ENST00000588027 NUP160Q12769 1436 aa21.33■■□□□ 1.01
LINC00662-204ENST00000588027 CEP170Q5SW79 1584 aa21.3■■□□□ 1
LINC00662-204ENST00000588027 TRHP20396 242 aaPredicted RBP21.27■■□□□ 1
LINC00662-204ENST00000588027 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
LINC00662-204ENST00000588027 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
LINC00662-204ENST00000588027 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
LINC00662-204ENST00000588027 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.97
LINC00662-204ENST00000588027 CUL7Q14999 1698 aa21.13■□□□□ 0.97
LINC00662-204ENST00000588027 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms