RNA–Protein interactions for RNA: ENST00000587969.1

GIPC1-209, Transcript of GIPC PDZ domain containing family member 1, humanhuman

TSL 2

Gene GIPC1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-209ENST00000587969 NISCHQ9Y2I1 1504 aa29.5■■■□□ 2.31
GIPC1-209ENST00000587969 ABCC9O60706 1549 aa26.61■■□□□ 1.85
GIPC1-209ENST00000587969 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
GIPC1-209ENST00000587969 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
GIPC1-209ENST00000587969 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
GIPC1-209ENST00000587969 NACADO15069 1562 aa25.05■■□□□ 1.6
GIPC1-209ENST00000587969 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
GIPC1-209ENST00000587969 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
GIPC1-209ENST00000587969 PABPN1Q86U42 306 aaKnown RBP eCLIP24.69■■□□□ 1.54
GIPC1-209ENST00000587969 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
GIPC1-209ENST00000587969 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
GIPC1-209ENST00000587969 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
GIPC1-209ENST00000587969 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
GIPC1-209ENST00000587969 SHROOM4Q9ULL8 1493 aa24.28■■□□□ 1.48
GIPC1-209ENST00000587969 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
GIPC1-209ENST00000587969 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
GIPC1-209ENST00000587969 CECR2Q9BXF3 1484 aa24.03■■□□□ 1.44
GIPC1-209ENST00000587969 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.43
GIPC1-209ENST00000587969 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
GIPC1-209ENST00000587969 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
GIPC1-209ENST00000587969 CUX2O14529 1486 aa23.12■■□□□ 1.29
GIPC1-209ENST00000587969 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
GIPC1-209ENST00000587969 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
GIPC1-209ENST00000587969 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
GIPC1-209ENST00000587969 HMGXB3Q12766 1538 aa22.95■■□□□ 1.26
GIPC1-209ENST00000587969 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
GIPC1-209ENST00000587969 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
GIPC1-209ENST00000587969 NESP48681 1621 aa22.78■■□□□ 1.24
GIPC1-209ENST00000587969 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
GIPC1-209ENST00000587969 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
GIPC1-209ENST00000587969 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
GIPC1-209ENST00000587969 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
GIPC1-209ENST00000587969 LAMC3Q9Y6N6 1575 aa22.64■■□□□ 1.22
GIPC1-209ENST00000587969 WIZO95785 1651 aa22.55■■□□□ 1.2
GIPC1-209ENST00000587969 PDS5BQ9NTI5 1447 aa22.51■■□□□ 1.19
GIPC1-209ENST00000587969 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
GIPC1-209ENST00000587969 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
GIPC1-209ENST00000587969 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
GIPC1-209ENST00000587969 WDR62O43379 1518 aa22.31■■□□□ 1.16
GIPC1-209ENST00000587969 RSF1Q96T23 1441 aaPredicted RBP22.28■■□□□ 1.16
GIPC1-209ENST00000587969 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
GIPC1-209ENST00000587969 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
GIPC1-209ENST00000587969 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
GIPC1-209ENST00000587969 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
GIPC1-209ENST00000587969 CFTRP13569 1480 aa22.09■■□□□ 1.13
GIPC1-209ENST00000587969 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
GIPC1-209ENST00000587969 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
GIPC1-209ENST00000587969 OSCARQ8IYS5 282 aa21.95■■□□□ 1.1
GIPC1-209ENST00000587969 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
GIPC1-209ENST00000587969 IFT140Q96RY7 1462 aa21.77■■□□□ 1.07
GIPC1-209ENST00000587969 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
GIPC1-209ENST00000587969 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
GIPC1-209ENST00000587969 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
GIPC1-209ENST00000587969 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
GIPC1-209ENST00000587969 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
GIPC1-209ENST00000587969 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
GIPC1-209ENST00000587969 ARHGEF11O15085 1522 aa21.64■■□□□ 1.05
GIPC1-209ENST00000587969 DNMBPQ6XZF7 1577 aa21.62■■□□□ 1.05
GIPC1-209ENST00000587969 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
GIPC1-209ENST00000587969 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
GIPC1-209ENST00000587969 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.03
GIPC1-209ENST00000587969 CHD1O14646 1710 aa21.46■■□□□ 1.03
GIPC1-209ENST00000587969 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
GIPC1-209ENST00000587969 CYB5RLQ6IPT4 315 aa21.42■■□□□ 1.02
GIPC1-209ENST00000587969 ARAP1Q96P48 1450 aa21.4■■□□□ 1.02
GIPC1-209ENST00000587969 SUPT5HO00267 1087 aaKnown RBP21.4■■□□□ 1.02
GIPC1-209ENST00000587969 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
GIPC1-209ENST00000587969 CUX1P39880 1505 aa21.36■■□□□ 1.01
GIPC1-209ENST00000587969 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
GIPC1-209ENST00000587969 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
GIPC1-209ENST00000587969 SOGA1O94964 1423 aa21.34■■□□□ 1.01
GIPC1-209ENST00000587969 FBLN2P98095 1184 aa21.33■■□□□ 1.01
GIPC1-209ENST00000587969 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
GIPC1-209ENST00000587969 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
GIPC1-209ENST00000587969 CLASP1Q7Z460 1538 aa21.27■■□□□ 1
GIPC1-209ENST00000587969 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
GIPC1-209ENST00000587969 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
GIPC1-209ENST00000587969 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
GIPC1-209ENST00000587969 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
GIPC1-209ENST00000587969 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
GIPC1-209ENST00000587969 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
GIPC1-209ENST00000587969 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
GIPC1-209ENST00000587969 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
GIPC1-209ENST00000587969 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
GIPC1-209ENST00000587969 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
GIPC1-209ENST00000587969 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
GIPC1-209ENST00000587969 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
GIPC1-209ENST00000587969 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
GIPC1-209ENST00000587969 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
GIPC1-209ENST00000587969 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
GIPC1-209ENST00000587969 NUP160Q12769 1436 aa20.89■□□□□ 0.94
GIPC1-209ENST00000587969 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
GIPC1-209ENST00000587969 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
GIPC1-209ENST00000587969 ERICH3Q5RHP9 1530 aa20.84■□□□□ 0.93
GIPC1-209ENST00000587969 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
GIPC1-209ENST00000587969 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
GIPC1-209ENST00000587969 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
GIPC1-209ENST00000587969 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
GIPC1-209ENST00000587969 KIF13AQ9H1H9 1805 aa20.64■□□□□ 0.89
GIPC1-209ENST00000587969 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms