RNA–Protein interactions for RNA: ENST00000587784.5

PCSK4-206, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 565 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-206ENST00000587784 NISCHQ9Y2I1 1504 aa40.9■■■■■ 4.14
PCSK4-206ENST00000587784 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.42
PCSK4-206ENST00000587784 ABCC9O60706 1549 aa35.6■■■■□ 3.29
PCSK4-206ENST00000587784 RB1CC1Q8TDY2 1594 aa34.29■■■■□ 3.08
PCSK4-206ENST00000587784 NACADO15069 1562 aa34.26■■■■□ 3.07
PCSK4-206ENST00000587784 MYO15BQ96JP2 1530 aa34.08■■■■□ 3.05
PCSK4-206ENST00000587784 ZCCHC6Q5VYS8 1495 aaKnown RBP34.07■■■■□ 3.05
PCSK4-206ENST00000587784 DCAF8L2P0C7V8 631 aa34.05■■■■□ 3.04
PCSK4-206ENST00000587784 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
PCSK4-206ENST00000587784 UNC13AQ9UPW8 1703 aa33.53■■■□□ 2.96
PCSK4-206ENST00000587784 BICRAQ9NZM4 1560 aa33.26■■■□□ 2.91
PCSK4-206ENST00000587784 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
PCSK4-206ENST00000587784 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
PCSK4-206ENST00000587784 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
PCSK4-206ENST00000587784 DNAJC5BQ9UF47 199 aa32.71■■■□□ 2.83
PCSK4-206ENST00000587784 EIF4G1Q04637 1599 aaKnown RBP32.37■■■□□ 2.77
PCSK4-206ENST00000587784 CC2D2AQ9P2K1 1620 aa32.25■■■□□ 2.75
PCSK4-206ENST00000587784 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
PCSK4-206ENST00000587784 SMARCA4P51532 1647 aa31.76■■■□□ 2.67
PCSK4-206ENST00000587784 BAZ1AQ9NRL2 1556 aaPredicted RBP31.72■■■□□ 2.67
PCSK4-206ENST00000587784 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
PCSK4-206ENST00000587784 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
PCSK4-206ENST00000587784 SMARCA2P51531 1590 aa31.57■■■□□ 2.64
PCSK4-206ENST00000587784 MROH2BQ7Z745 1585 aa31.5■■■□□ 2.63
PCSK4-206ENST00000587784 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
PCSK4-206ENST00000587784 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
PCSK4-206ENST00000587784 BAZ1BQ9UIG0 1483 aaKnown RBP31.32■■■□□ 2.6
PCSK4-206ENST00000587784 WIZO95785 1651 aa31.16■■■□□ 2.58
PCSK4-206ENST00000587784 RSF1Q96T23 1441 aaPredicted RBP31.12■■■□□ 2.57
PCSK4-206ENST00000587784 TOP2AP11388 1531 aaKnown RBP30.86■■■□□ 2.53
PCSK4-206ENST00000587784 NESP48681 1621 aa30.8■■■□□ 2.52
PCSK4-206ENST00000587784 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
PCSK4-206ENST00000587784 ERCC6Q03468 1493 aa30.7■■■□□ 2.51
PCSK4-206ENST00000587784 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
PCSK4-206ENST00000587784 PDS5BQ9NTI5 1447 aa30.55■■■□□ 2.48
PCSK4-206ENST00000587784 CFTRP13569 1480 aa30.48■■■□□ 2.47
PCSK4-206ENST00000587784 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
PCSK4-206ENST00000587784 CCDC88BA6NC98 1476 aa30.45■■■□□ 2.47
PCSK4-206ENST00000587784 CUX2O14529 1486 aa30.45■■■□□ 2.47
PCSK4-206ENST00000587784 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
PCSK4-206ENST00000587784 FANCD2Q9BXW9 1451 aa30.29■■■□□ 2.44
PCSK4-206ENST00000587784 PRDM2Q13029 1718 aa30.28■■■□□ 2.44
PCSK4-206ENST00000587784 CEP164Q9UPV0 1460 aa30.26■■■□□ 2.44
PCSK4-206ENST00000587784 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
PCSK4-206ENST00000587784 SUPT5HO00267 1087 aaKnown RBP30.18■■■□□ 2.42
PCSK4-206ENST00000587784 WDR62O43379 1518 aa30.17■■■□□ 2.42
PCSK4-206ENST00000587784 URB2Q14146 1524 aaKnown RBP30■■■□□ 2.39
PCSK4-206ENST00000587784 ABCC8Q09428 1581 aa29.83■■■□□ 2.37
PCSK4-206ENST00000587784 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
PCSK4-206ENST00000587784 DNMBPQ6XZF7 1577 aa29.79■■■□□ 2.36
PCSK4-206ENST00000587784 IFT140Q96RY7 1462 aa29.64■■■□□ 2.34
PCSK4-206ENST00000587784 CUX1P39880 1505 aa29.56■■■□□ 2.32
PCSK4-206ENST00000587784 POLA1P09884 1462 aaPredicted RBP29.55■■■□□ 2.32
PCSK4-206ENST00000587784 DNAJC5Q9H3Z4 198 aa29.53■■■□□ 2.32
PCSK4-206ENST00000587784 TARBP1Q13395 1621 aaKnown RBP29.51■■■□□ 2.31
PCSK4-206ENST00000587784 ZNF608Q9ULD9 1512 aaPredicted RBP29.48■■■□□ 2.31
PCSK4-206ENST00000587784 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
PCSK4-206ENST00000587784 EIF4G3O43432 1585 aaKnown RBP29.4■■■□□ 2.3
PCSK4-206ENST00000587784 SOGA1O94964 1423 aa29.4■■■□□ 2.3
PCSK4-206ENST00000587784 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
PCSK4-206ENST00000587784 WRNQ14191 1432 aaPredicted RBP eCLIP29.35■■■□□ 2.29
PCSK4-206ENST00000587784 BIVM-ERCC5R4GMW8 1640 aa29.33■■■□□ 2.29
PCSK4-206ENST00000587784 WDR97A6NE52 1622 aa29.32■■■□□ 2.28
PCSK4-206ENST00000587784 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
PCSK4-206ENST00000587784 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.28
PCSK4-206ENST00000587784 SYNJ1O43426 1573 aa29.28■■■□□ 2.28
PCSK4-206ENST00000587784 TDRD9Q8NDG6 1382 aaKnown RBP29.23■■■□□ 2.27
PCSK4-206ENST00000587784 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.27
PCSK4-206ENST00000587784 OSCARQ8IYS5 282 aa29.12■■■□□ 2.25
PCSK4-206ENST00000587784 ABCA5Q8WWZ7 1642 aa29.11■■■□□ 2.25
PCSK4-206ENST00000587784 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
PCSK4-206ENST00000587784 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
PCSK4-206ENST00000587784 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
PCSK4-206ENST00000587784 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
PCSK4-206ENST00000587784 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
PCSK4-206ENST00000587784 CHD1O14646 1710 aa29.04■■■□□ 2.24
PCSK4-206ENST00000587784 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
PCSK4-206ENST00000587784 FBLN2P98095 1184 aa28.9■■■□□ 2.22
PCSK4-206ENST00000587784 ERICH3Q5RHP9 1530 aa28.86■■■□□ 2.21
PCSK4-206ENST00000587784 CHMP7Q8WUX9 453 aaPredicted RBP28.85■■■□□ 2.21
PCSK4-206ENST00000587784 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
PCSK4-206ENST00000587784 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.19
PCSK4-206ENST00000587784 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
PCSK4-206ENST00000587784 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
PCSK4-206ENST00000587784 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
PCSK4-206ENST00000587784 RIMBP3CA6NJZ7 1639 aa28.7■■■□□ 2.19
PCSK4-206ENST00000587784 RIMBP3BA6NNM3 1639 aa28.7■■■□□ 2.19
PCSK4-206ENST00000587784 RIMBP3Q9UFD9 1639 aa28.7■■■□□ 2.19
PCSK4-206ENST00000587784 ARHGEF11O15085 1522 aa28.69■■■□□ 2.18
PCSK4-206ENST00000587784 IGF1RP08069 1367 aa28.62■■■□□ 2.17
PCSK4-206ENST00000587784 NUP160Q12769 1436 aa28.61■■■□□ 2.17
PCSK4-206ENST00000587784 CUL7Q14999 1698 aa28.6■■■□□ 2.17
PCSK4-206ENST00000587784 CEP170Q5SW79 1584 aa28.58■■■□□ 2.17
PCSK4-206ENST00000587784 TRIM41Q8WV44 630 aa28.55■■■□□ 2.16
PCSK4-206ENST00000587784 ARAP1Q96P48 1450 aa28.45■■■□□ 2.14
PCSK4-206ENST00000587784 CARMIL1Q5VZK9 1371 aa28.44■■■□□ 2.14
PCSK4-206ENST00000587784 SHROOM2Q13796 1616 aa28.43■■■□□ 2.14
PCSK4-206ENST00000587784 RUSC2Q8N2Y8 1516 aa28.42■■■□□ 2.14
PCSK4-206ENST00000587784 CYB5RLQ6IPT4 315 aa28.35■■■□□ 2.13
PCSK4-206ENST00000587784 KIAA0586Q9BVV6 1533 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms