RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
HDAC5-206ENST00000587776 ABCC9O60706 1549 aa34.4■■■■□ 3.1
HDAC5-206ENST00000587776 CCDC180Q9P1Z9 1646 aa34.36■■■■□ 3.09
HDAC5-206ENST00000587776 RB1CC1Q8TDY2 1594 aa32.74■■■□□ 2.83
HDAC5-206ENST00000587776 NACADO15069 1562 aa32.44■■■□□ 2.78
HDAC5-206ENST00000587776 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
HDAC5-206ENST00000587776 DNAJC5BQ9UF47 199 aa32.23■■■□□ 2.75
HDAC5-206ENST00000587776 UNC13AQ9UPW8 1703 aa32.08■■■□□ 2.73
HDAC5-206ENST00000587776 PABPN1Q86U42 306 aaKnown RBP eCLIP31.95■■■□□ 2.717e-8■□□□□ 9.1
HDAC5-206ENST00000587776 MYO15BQ96JP2 1530 aa31.89■■■□□ 2.7
HDAC5-206ENST00000587776 BICRAQ9NZM4 1560 aa31.72■■■□□ 2.67
HDAC5-206ENST00000587776 ZCCHC6Q5VYS8 1495 aaKnown RBP31.57■■■□□ 2.64
HDAC5-206ENST00000587776 DCAF1Q9Y4B6 1507 aa31.45■■■□□ 2.63
HDAC5-206ENST00000587776 SCRIBQ14160 1630 aa31.3■■■□□ 2.6
HDAC5-206ENST00000587776 SHROOM4Q9ULL8 1493 aa31.29■■■□□ 2.6
HDAC5-206ENST00000587776 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
HDAC5-206ENST00000587776 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
HDAC5-206ENST00000587776 EIF4G1Q04637 1599 aaKnown RBP30.98■■■□□ 2.55
HDAC5-206ENST00000587776 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
HDAC5-206ENST00000587776 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
HDAC5-206ENST00000587776 ATAD2BQ9ULI0 1458 aa29.8■■■□□ 2.36
HDAC5-206ENST00000587776 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
HDAC5-206ENST00000587776 ERCC6Q03468 1493 aa29.76■■■□□ 2.35
HDAC5-206ENST00000587776 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
HDAC5-206ENST00000587776 DNAJC5Q9H3Z4 198 aa29.71■■■□□ 2.35
HDAC5-206ENST00000587776 CUX2O14529 1486 aa29.69■■■□□ 2.34
HDAC5-206ENST00000587776 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.33
HDAC5-206ENST00000587776 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
HDAC5-206ENST00000587776 NESP48681 1621 aa29.5■■■□□ 2.31
HDAC5-206ENST00000587776 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
HDAC5-206ENST00000587776 MROH2BQ7Z745 1585 aa29.37■■■□□ 2.29
HDAC5-206ENST00000587776 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
HDAC5-206ENST00000587776 THOC2Q8NI27 1593 aaKnown RBP29.27■■■□□ 2.28
HDAC5-206ENST00000587776 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
HDAC5-206ENST00000587776 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
HDAC5-206ENST00000587776 WIZO95785 1651 aa29.09■■■□□ 2.25
HDAC5-206ENST00000587776 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
HDAC5-206ENST00000587776 MRC2Q9UBG0 1479 aa28.89■■■□□ 2.22
HDAC5-206ENST00000587776 WDR62O43379 1518 aa28.81■■■□□ 2.2
HDAC5-206ENST00000587776 CEP164Q9UPV0 1460 aa28.78■■■□□ 2.2
HDAC5-206ENST00000587776 FANCD2Q9BXW9 1451 aa28.7■■■□□ 2.18
HDAC5-206ENST00000587776 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
HDAC5-206ENST00000587776 RSF1Q96T23 1441 aaPredicted RBP28.68■■■□□ 2.18
HDAC5-206ENST00000587776 CFTRP13569 1480 aa28.63■■■□□ 2.17
HDAC5-206ENST00000587776 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
HDAC5-206ENST00000587776 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
HDAC5-206ENST00000587776 URB2Q14146 1524 aaKnown RBP28.46■■■□□ 2.15
HDAC5-206ENST00000587776 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
HDAC5-206ENST00000587776 OSCARQ8IYS5 282 aa28.27■■■□□ 2.12
HDAC5-206ENST00000587776 IFT140Q96RY7 1462 aa28.16■■■□□ 2.1
HDAC5-206ENST00000587776 TOPBP1Q92547 1522 aa28.14■■■□□ 2.1
HDAC5-206ENST00000587776 ZNF608Q9ULD9 1512 aaPredicted RBP28.12■■■□□ 2.09
HDAC5-206ENST00000587776 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
HDAC5-206ENST00000587776 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
HDAC5-206ENST00000587776 EIF4G3O43432 1585 aaKnown RBP28.05■■■□□ 2.08
HDAC5-206ENST00000587776 RIMBP3CA6NJZ7 1639 aa28.02■■■□□ 2.08
HDAC5-206ENST00000587776 RIMBP3BA6NNM3 1639 aa28.02■■■□□ 2.08
HDAC5-206ENST00000587776 RIMBP3Q9UFD9 1639 aa28.02■■■□□ 2.08
HDAC5-206ENST00000587776 CHD1O14646 1710 aa27.92■■■□□ 2.06
HDAC5-206ENST00000587776 TARBP1Q13395 1621 aaKnown RBP27.92■■■□□ 2.06
HDAC5-206ENST00000587776 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
HDAC5-206ENST00000587776 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.053e-9■■■■■ 41.6
HDAC5-206ENST00000587776 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
HDAC5-206ENST00000587776 FBLN2P98095 1184 aa27.74■■■□□ 2.03
HDAC5-206ENST00000587776 RAD54L2Q9Y4B4 1467 aa27.73■■■□□ 2.03
HDAC5-206ENST00000587776 SOGA1O94964 1423 aa27.7■■■□□ 2.03
HDAC5-206ENST00000587776 FGD5Q6ZNL6 1462 aa27.67■■■□□ 2.02
HDAC5-206ENST00000587776 TDRD9Q8NDG6 1382 aaKnown RBP27.65■■■□□ 2.02
HDAC5-206ENST00000587776 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
HDAC5-206ENST00000587776 CYB5RLQ6IPT4 315 aa27.63■■■□□ 2.01
HDAC5-206ENST00000587776 CUX1P39880 1505 aa27.62■■■□□ 2.01
HDAC5-206ENST00000587776 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
HDAC5-206ENST00000587776 ARAP1Q96P48 1450 aa27.57■■■□□ 2
HDAC5-206ENST00000587776 SYNJ1O43426 1573 aa27.52■■■□□ 2
HDAC5-206ENST00000587776 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■■□□ 2
HDAC5-206ENST00000587776 PBRM1Q86U86 1689 aa27.51■■□□□ 1.99
HDAC5-206ENST00000587776 GRIN2BQ13224 1484 aa27.5■■□□□ 1.99
HDAC5-206ENST00000587776 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
HDAC5-206ENST00000587776 CLASP1Q7Z460 1538 aa27.47■■□□□ 1.99
HDAC5-206ENST00000587776 TRHP20396 242 aaPredicted RBP27.43■■□□□ 1.98
HDAC5-206ENST00000587776 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
HDAC5-206ENST00000587776 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
HDAC5-206ENST00000587776 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
HDAC5-206ENST00000587776 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
HDAC5-206ENST00000587776 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
HDAC5-206ENST00000587776 BIVM-ERCC5R4GMW8 1640 aa27.2■■□□□ 1.95
HDAC5-206ENST00000587776 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.94
HDAC5-206ENST00000587776 TOP2BQ02880 1626 aa27.17■■□□□ 1.94
HDAC5-206ENST00000587776 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
HDAC5-206ENST00000587776 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
HDAC5-206ENST00000587776 CEP170Q5SW79 1584 aa27.07■■□□□ 1.92
HDAC5-206ENST00000587776 ERCC6L2Q5T890 1561 aa27.04■■□□□ 1.92
HDAC5-206ENST00000587776 FHAD1B1AJZ9 1412 aa27.01■■□□□ 1.91
HDAC5-206ENST00000587776 NUP160Q12769 1436 aa27.01■■□□□ 1.91
HDAC5-206ENST00000587776 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
HDAC5-206ENST00000587776 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
HDAC5-206ENST00000587776 PRG4Q92954 1404 aaPredicted RBP26.8■■□□□ 1.88
HDAC5-206ENST00000587776 RUSC2Q8N2Y8 1516 aa26.78■■□□□ 1.88
HDAC5-206ENST00000587776 KIF13AQ9H1H9 1805 aa26.74■■□□□ 1.87
HDAC5-206ENST00000587776 AEBP2Q6ZN18 517 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms