RNA–Protein interactions for RNA: ENST00000587711.5

ROGDI-208, Transcript of rogdi homolog, humanhuman

TSL 5

Gene ROGDI, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-208ENST00000587711 NISCHQ9Y2I1 1504 aa46.49■■■■■ 5.03
ROGDI-208ENST00000587711 CCDC180Q9P1Z9 1646 aa41.62■■■■■ 4.25
ROGDI-208ENST00000587711 ABCC9O60706 1549 aa41.53■■■■■ 4.24
ROGDI-208ENST00000587711 RB1CC1Q8TDY2 1594 aa39.54■■■■□ 3.92
ROGDI-208ENST00000587711 NACADO15069 1562 aa39.29■■■■□ 3.88
ROGDI-208ENST00000587711 DCAF8L2P0C7V8 631 aa39.21■■■■□ 3.87
ROGDI-208ENST00000587711 MYO15BQ96JP2 1530 aa38.75■■■■□ 3.79
ROGDI-208ENST00000587711 DNAJC5BQ9UF47 199 aa38.75■■■■□ 3.79
ROGDI-208ENST00000587711 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
ROGDI-208ENST00000587711 PABPN1Q86U42 306 aaKnown RBP eCLIP38.68■■■■□ 3.78
ROGDI-208ENST00000587711 ZCCHC6Q5VYS8 1495 aaKnown RBP38.59■■■■□ 3.77
ROGDI-208ENST00000587711 BICRAQ9NZM4 1560 aa38.41■■■■□ 3.74
ROGDI-208ENST00000587711 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
ROGDI-208ENST00000587711 SCRIBQ14160 1630 aa38.04■■■■□ 3.68
ROGDI-208ENST00000587711 SHROOM4Q9ULL8 1493 aa37.82■■■■□ 3.64
ROGDI-208ENST00000587711 CC2D2AQ9P2K1 1620 aa37.49■■■■□ 3.59
ROGDI-208ENST00000587711 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
ROGDI-208ENST00000587711 CECR2Q9BXF3 1484 aa37.35■■■■□ 3.57
ROGDI-208ENST00000587711 NCAPD3P42695 1498 aa36.25■■■■□ 3.39
ROGDI-208ENST00000587711 SMARCA4P51532 1647 aa36.25■■■■□ 3.39
ROGDI-208ENST00000587711 ATAD2BQ9ULI0 1458 aa36.22■■■■□ 3.39
ROGDI-208ENST00000587711 SMARCA2P51531 1590 aa36.1■■■■□ 3.37
ROGDI-208ENST00000587711 BAZ1AQ9NRL2 1556 aaPredicted RBP36.07■■■■□ 3.37
ROGDI-208ENST00000587711 HMGXB3Q12766 1538 aa36.03■■■■□ 3.36
ROGDI-208ENST00000587711 BAZ1BQ9UIG0 1483 aaKnown RBP35.9■■■■□ 3.34
ROGDI-208ENST00000587711 MROH2BQ7Z745 1585 aa35.87■■■■□ 3.33
ROGDI-208ENST00000587711 PEG3Q9GZU2 1588 aa35.85■■■■□ 3.33
ROGDI-208ENST00000587711 ERCC6Q03468 1493 aa35.82■■■■□ 3.32
ROGDI-208ENST00000587711 NESP48681 1621 aa35.72■■■■□ 3.31
ROGDI-208ENST00000587711 CUX2O14529 1486 aa35.62■■■■□ 3.29
ROGDI-208ENST00000587711 WIZO95785 1651 aa35.46■■■■□ 3.27
ROGDI-208ENST00000587711 LAMC3Q9Y6N6 1575 aa35.43■■■■□ 3.26
ROGDI-208ENST00000587711 DNAJC5Q9H3Z4 198 aa35.36■■■■□ 3.25
ROGDI-208ENST00000587711 THOC2Q8NI27 1593 aaKnown RBP35.31■■■■□ 3.24
ROGDI-208ENST00000587711 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
ROGDI-208ENST00000587711 PDS5BQ9NTI5 1447 aa35.21■■■■□ 3.23
ROGDI-208ENST00000587711 CADPSQ9ULU8 1353 aa35.18■■■■□ 3.22
ROGDI-208ENST00000587711 RSF1Q96T23 1441 aaPredicted RBP35.16■■■■□ 3.22
ROGDI-208ENST00000587711 TOP2AP11388 1531 aaKnown RBP35■■■■□ 3.19
ROGDI-208ENST00000587711 MRC2Q9UBG0 1479 aa34.94■■■■□ 3.18
ROGDI-208ENST00000587711 WDR62O43379 1518 aa34.85■■■■□ 3.17
ROGDI-208ENST00000587711 CEP164Q9UPV0 1460 aa34.84■■■■□ 3.17
ROGDI-208ENST00000587711 CFTRP13569 1480 aa34.83■■■■□ 3.17
ROGDI-208ENST00000587711 FANCD2Q9BXW9 1451 aa34.83■■■■□ 3.17
ROGDI-208ENST00000587711 CCDC88BA6NC98 1476 aa34.59■■■■□ 3.13
ROGDI-208ENST00000587711 URB2Q14146 1524 aaKnown RBP34.55■■■■□ 3.12
ROGDI-208ENST00000587711 PRDM2Q13029 1718 aa34.52■■■■□ 3.12
ROGDI-208ENST00000587711 TOPBP1Q92547 1522 aa34.19■■■■□ 3.06
ROGDI-208ENST00000587711 IFT140Q96RY7 1462 aa34.11■■■■□ 3.05
ROGDI-208ENST00000587711 ZNF608Q9ULD9 1512 aaPredicted RBP34.1■■■■□ 3.05
ROGDI-208ENST00000587711 DNMBPQ6XZF7 1577 aa34.07■■■■□ 3.05
ROGDI-208ENST00000587711 ABCC8Q09428 1581 aa34.04■■■■□ 3.04
ROGDI-208ENST00000587711 TRIM41Q8WV44 630 aa34.01■■■■□ 3.03
ROGDI-208ENST00000587711 OSCARQ8IYS5 282 aa34■■■■□ 3.03
ROGDI-208ENST00000587711 EIF4G3O43432 1585 aaKnown RBP33.93■■■■□ 3.02
ROGDI-208ENST00000587711 TARBP1Q13395 1621 aaKnown RBP33.87■■■■□ 3.01
ROGDI-208ENST00000587711 POLA1P09884 1462 aaPredicted RBP33.86■■■■□ 3.01
ROGDI-208ENST00000587711 AQRO60306 1485 aaKnown RBP eCLIP33.81■■■■□ 31e-6■■■■■ 31.5
ROGDI-208ENST00000587711 SUPT5HO00267 1087 aaKnown RBP33.8■■■■□ 3
ROGDI-208ENST00000587711 RAD54L2Q9Y4B4 1467 aa33.76■■■□□ 2.99
ROGDI-208ENST00000587711 CUX1P39880 1505 aa33.69■■■□□ 2.98
ROGDI-208ENST00000587711 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
ROGDI-208ENST00000587711 SOGA1O94964 1423 aa33.68■■■□□ 2.98
ROGDI-208ENST00000587711 CHD1O14646 1710 aa33.64■■■□□ 2.98
ROGDI-208ENST00000587711 RIMBP3CA6NJZ7 1639 aa33.63■■■□□ 2.97
ROGDI-208ENST00000587711 RIMBP3BA6NNM3 1639 aa33.63■■■□□ 2.97
ROGDI-208ENST00000587711 RIMBP3Q9UFD9 1639 aa33.63■■■□□ 2.97
ROGDI-208ENST00000587711 TDRD9Q8NDG6 1382 aaKnown RBP33.62■■■□□ 2.97
ROGDI-208ENST00000587711 FBLN2P98095 1184 aa33.55■■■□□ 2.96
ROGDI-208ENST00000587711 ARHGEF11O15085 1522 aa33.54■■■□□ 2.96
ROGDI-208ENST00000587711 SNAPC4Q5SXM2 1469 aa33.48■■■□□ 2.95
ROGDI-208ENST00000587711 WDR97A6NE52 1622 aa33.47■■■□□ 2.95
ROGDI-208ENST00000587711 GRIN2BQ13224 1484 aa33.37■■■□□ 2.93
ROGDI-208ENST00000587711 MAGI1Q96QZ7 1491 aaPredicted RBP33.34■■■□□ 2.93
ROGDI-208ENST00000587711 PBRM1Q86U86 1689 aa33.29■■■□□ 2.92
ROGDI-208ENST00000587711 GAPVD1Q14C86 1478 aa33.29■■■□□ 2.92
ROGDI-208ENST00000587711 CHMP7Q8WUX9 453 aaPredicted RBP33.28■■■□□ 2.92
ROGDI-208ENST00000587711 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
ROGDI-208ENST00000587711 CYB5RLQ6IPT4 315 aa33.26■■■□□ 2.91
ROGDI-208ENST00000587711 ABCA5Q8WWZ7 1642 aa33.24■■■□□ 2.91
ROGDI-208ENST00000587711 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
ROGDI-208ENST00000587711 ARAP1Q96P48 1450 aa33.23■■■□□ 2.91
ROGDI-208ENST00000587711 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
ROGDI-208ENST00000587711 SYNJ1O43426 1573 aa33.21■■■□□ 2.91
ROGDI-208ENST00000587711 WRNQ14191 1432 aaPredicted RBP eCLIP33.18■■■□□ 2.9
ROGDI-208ENST00000587711 TOP2BQ02880 1626 aa33.17■■■□□ 2.9
ROGDI-208ENST00000587711 BIVM-ERCC5R4GMW8 1640 aa33.17■■■□□ 2.9
ROGDI-208ENST00000587711 ADAMTS12P58397 1594 aa33■■■□□ 2.87
ROGDI-208ENST00000587711 GRIN2AQ12879 1464 aa32.96■■■□□ 2.87
ROGDI-208ENST00000587711 CEP170Q5SW79 1584 aa32.87■■■□□ 2.85
ROGDI-208ENST00000587711 TRHP20396 242 aaPredicted RBP32.85■■■□□ 2.85
ROGDI-208ENST00000587711 ERICH3Q5RHP9 1530 aa32.85■■■□□ 2.85
ROGDI-208ENST00000587711 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
ROGDI-208ENST00000587711 NUP160Q12769 1436 aa32.82■■■□□ 2.84
ROGDI-208ENST00000587711 ERCC6L2Q5T890 1561 aa32.78■■■□□ 2.84
ROGDI-208ENST00000587711 SHROOM2Q13796 1616 aa32.66■■■□□ 2.82
ROGDI-208ENST00000587711 RUSC2Q8N2Y8 1516 aa32.53■■■□□ 2.8
ROGDI-208ENST00000587711 KIF27Q86VH2 1401 aa32.51■■■□□ 2.8
ROGDI-208ENST00000587711 PRG4Q92954 1404 aaPredicted RBP32.51■■■□□ 2.79
ROGDI-208ENST00000587711 IGF1RP08069 1367 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms