RNA–Protein interactions for RNA: ENST00000587479.2

RANBP3-211, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-211ENST00000587479 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
RANBP3-211ENST00000587479 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
RANBP3-211ENST00000587479 ABCC9O60706 1549 aa34.38■■■■□ 3.09
RANBP3-211ENST00000587479 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
RANBP3-211ENST00000587479 NACADO15069 1562 aa32.8■■■□□ 2.84
RANBP3-211ENST00000587479 DCAF8L2P0C7V8 631 aa32.67■■■□□ 2.82
RANBP3-211ENST00000587479 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
RANBP3-211ENST00000587479 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
RANBP3-211ENST00000587479 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
RANBP3-211ENST00000587479 DCAF1Q9Y4B6 1507 aa32.17■■■□□ 2.74
RANBP3-211ENST00000587479 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.728e-7■■□□□ 12.1
RANBP3-211ENST00000587479 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
RANBP3-211ENST00000587479 DNAJC5BQ9UF47 199 aa31.85■■■□□ 2.69
RANBP3-211ENST00000587479 SCRIBQ14160 1630 aa31.7■■■□□ 2.66
RANBP3-211ENST00000587479 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
RANBP3-211ENST00000587479 EIF4G1Q04637 1599 aaKnown RBP31.12■■■□□ 2.57
RANBP3-211ENST00000587479 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
RANBP3-211ENST00000587479 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.54
RANBP3-211ENST00000587479 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
RANBP3-211ENST00000587479 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
RANBP3-211ENST00000587479 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.43
RANBP3-211ENST00000587479 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
RANBP3-211ENST00000587479 SMARCA2P51531 1590 aa30.18■■■□□ 2.42
RANBP3-211ENST00000587479 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
RANBP3-211ENST00000587479 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
RANBP3-211ENST00000587479 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
RANBP3-211ENST00000587479 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.39
RANBP3-211ENST00000587479 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
RANBP3-211ENST00000587479 WIZO95785 1651 aa29.64■■■□□ 2.34
RANBP3-211ENST00000587479 NESP48681 1621 aa29.62■■■□□ 2.33
RANBP3-211ENST00000587479 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
RANBP3-211ENST00000587479 CUX2O14529 1486 aa29.52■■■□□ 2.32
RANBP3-211ENST00000587479 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.31
RANBP3-211ENST00000587479 PDS5BQ9NTI5 1447 aa29.35■■■□□ 2.29
RANBP3-211ENST00000587479 CADPSQ9ULU8 1353 aa29.34■■■□□ 2.29
RANBP3-211ENST00000587479 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
RANBP3-211ENST00000587479 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
RANBP3-211ENST00000587479 THOC2Q8NI27 1593 aaKnown RBP29.29■■■□□ 2.28
RANBP3-211ENST00000587479 CFTRP13569 1480 aa29.07■■■□□ 2.24
RANBP3-211ENST00000587479 MRC2Q9UBG0 1479 aa29.06■■■□□ 2.24
RANBP3-211ENST00000587479 DNAJC5Q9H3Z4 198 aa29.05■■■□□ 2.24
RANBP3-211ENST00000587479 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
RANBP3-211ENST00000587479 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
RANBP3-211ENST00000587479 WDR62O43379 1518 aa28.97■■■□□ 2.23
RANBP3-211ENST00000587479 CCDC88BA6NC98 1476 aa28.93■■■□□ 2.22
RANBP3-211ENST00000587479 PRDM2Q13029 1718 aa28.92■■■□□ 2.22
RANBP3-211ENST00000587479 URB2Q14146 1524 aaKnown RBP28.73■■■□□ 2.19
RANBP3-211ENST00000587479 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
RANBP3-211ENST00000587479 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
RANBP3-211ENST00000587479 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.15
RANBP3-211ENST00000587479 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
RANBP3-211ENST00000587479 IFT140Q96RY7 1462 aa28.43■■■□□ 2.14
RANBP3-211ENST00000587479 ZNF608Q9ULD9 1512 aaPredicted RBP28.3■■■□□ 2.12
RANBP3-211ENST00000587479 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
RANBP3-211ENST00000587479 POLA1P09884 1462 aaPredicted RBP28.22■■■□□ 2.11
RANBP3-211ENST00000587479 TARBP1Q13395 1621 aaKnown RBP28.22■■■□□ 2.11
RANBP3-211ENST00000587479 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
RANBP3-211ENST00000587479 CUX1P39880 1505 aa28.13■■■□□ 2.09
RANBP3-211ENST00000587479 SOGA1O94964 1423 aa28.12■■■□□ 2.09
RANBP3-211ENST00000587479 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
RANBP3-211ENST00000587479 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.095e-8■■■■■ 30.4
RANBP3-211ENST00000587479 RAD54L2Q9Y4B4 1467 aa28.09■■■□□ 2.09
RANBP3-211ENST00000587479 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
RANBP3-211ENST00000587479 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
RANBP3-211ENST00000587479 CHD1O14646 1710 aa27.97■■■□□ 2.07
RANBP3-211ENST00000587479 TRIM41Q8WV44 630 aa27.94■■■□□ 2.06
RANBP3-211ENST00000587479 FBLN2P98095 1184 aa27.88■■■□□ 2.05
RANBP3-211ENST00000587479 GRIN2BQ13224 1484 aa27.84■■■□□ 2.05
RANBP3-211ENST00000587479 SNAPC4Q5SXM2 1469 aa27.84■■■□□ 2.05
RANBP3-211ENST00000587479 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
RANBP3-211ENST00000587479 RIMBP3CA6NJZ7 1639 aa27.82■■■□□ 2.04
RANBP3-211ENST00000587479 RIMBP3BA6NNM3 1639 aa27.82■■■□□ 2.04
RANBP3-211ENST00000587479 RIMBP3Q9UFD9 1639 aa27.82■■■□□ 2.04
RANBP3-211ENST00000587479 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.045e-6■■■■■ 29.2
RANBP3-211ENST00000587479 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
RANBP3-211ENST00000587479 ABCA10Q8WWZ4 1543 aa27.82■■■□□ 2.04
RANBP3-211ENST00000587479 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
RANBP3-211ENST00000587479 PBRM1Q86U86 1689 aa27.8■■■□□ 2.04
RANBP3-211ENST00000587479 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
RANBP3-211ENST00000587479 SYNJ1O43426 1573 aa27.76■■■□□ 2.03
RANBP3-211ENST00000587479 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
RANBP3-211ENST00000587479 ABCA5Q8WWZ7 1642 aa27.75■■■□□ 2.03
RANBP3-211ENST00000587479 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
RANBP3-211ENST00000587479 SYNJ2O15056 1496 aa27.7■■■□□ 2.03
RANBP3-211ENST00000587479 CLASP1Q7Z460 1538 aa27.61■■■□□ 2.01
RANBP3-211ENST00000587479 ADAMTS12P58397 1594 aa27.52■■■□□ 2
RANBP3-211ENST00000587479 CYB5RLQ6IPT4 315 aa27.52■■■□□ 2
RANBP3-211ENST00000587479 ERICH3Q5RHP9 1530 aa27.5■■□□□ 1.99
RANBP3-211ENST00000587479 ARAP1Q96P48 1450 aa27.49■■□□□ 1.99
RANBP3-211ENST00000587479 GRIN2AQ12879 1464 aa27.48■■□□□ 1.99
RANBP3-211ENST00000587479 FHAD1B1AJZ9 1412 aa27.46■■□□□ 1.99
RANBP3-211ENST00000587479 NUP160Q12769 1436 aa27.35■■□□□ 1.97
RANBP3-211ENST00000587479 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
RANBP3-211ENST00000587479 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
RANBP3-211ENST00000587479 SHROOM2Q13796 1616 aa27.23■■□□□ 1.95
RANBP3-211ENST00000587479 CUL7Q14999 1698 aa27.21■■□□□ 1.95
RANBP3-211ENST00000587479 IGF1RP08069 1367 aa27.18■■□□□ 1.94
RANBP3-211ENST00000587479 ERCC6L2Q5T890 1561 aa27.17■■□□□ 1.94
RANBP3-211ENST00000587479 TRHP20396 242 aaPredicted RBP27.13■■□□□ 1.93
RANBP3-211ENST00000587479 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms