RNA–Protein interactions for RNA: ENST00000587295.5

ITGA2B-202, Transcript of integrin subunit alpha 2b, humanhuman

TSL 3

Gene ITGA2B, Length 496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA2B-202ENST00000587295 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
ITGA2B-202ENST00000587295 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
ITGA2B-202ENST00000587295 ABCC9O60706 1549 aa17.13■□□□□ 0.33
ITGA2B-202ENST00000587295 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
ITGA2B-202ENST00000587295 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
ITGA2B-202ENST00000587295 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
ITGA2B-202ENST00000587295 NACADO15069 1562 aa16.65■□□□□ 0.26
ITGA2B-202ENST00000587295 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
ITGA2B-202ENST00000587295 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.24
ITGA2B-202ENST00000587295 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
ITGA2B-202ENST00000587295 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
ITGA2B-202ENST00000587295 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
ITGA2B-202ENST00000587295 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
ITGA2B-202ENST00000587295 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
ITGA2B-202ENST00000587295 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
ITGA2B-202ENST00000587295 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
ITGA2B-202ENST00000587295 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
ITGA2B-202ENST00000587295 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.09
ITGA2B-202ENST00000587295 MROH2BQ7Z745 1585 aa15.57■□□□□ 0.08
ITGA2B-202ENST00000587295 CC2D2AQ9P2K1 1620 aa15.5■□□□□ 0.07
ITGA2B-202ENST00000587295 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
ITGA2B-202ENST00000587295 WIZO95785 1651 aa15.49■□□□□ 0.07
ITGA2B-202ENST00000587295 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
ITGA2B-202ENST00000587295 SMARCA2P51531 1590 aa15.46■□□□□ 0.07
ITGA2B-202ENST00000587295 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
ITGA2B-202ENST00000587295 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
ITGA2B-202ENST00000587295 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
ITGA2B-202ENST00000587295 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
ITGA2B-202ENST00000587295 TOP2AP11388 1531 aaKnown RBP15.32■□□□□ 0.04
ITGA2B-202ENST00000587295 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
ITGA2B-202ENST00000587295 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
ITGA2B-202ENST00000587295 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
ITGA2B-202ENST00000587295 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
ITGA2B-202ENST00000587295 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
ITGA2B-202ENST00000587295 NESP48681 1621 aa14.9□□□□□ -0.02
ITGA2B-202ENST00000587295 CADPSQ9ULU8 1353 aa14.89□□□□□ -0.03
ITGA2B-202ENST00000587295 CFTRP13569 1480 aa14.88□□□□□ -0.03
ITGA2B-202ENST00000587295 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
ITGA2B-202ENST00000587295 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
ITGA2B-202ENST00000587295 ERCC6Q03468 1493 aa14.8□□□□□ -0.04
ITGA2B-202ENST00000587295 FANCD2Q9BXW9 1451 aa14.78□□□□□ -0.04
ITGA2B-202ENST00000587295 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
ITGA2B-202ENST00000587295 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
ITGA2B-202ENST00000587295 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
ITGA2B-202ENST00000587295 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
ITGA2B-202ENST00000587295 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
ITGA2B-202ENST00000587295 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
ITGA2B-202ENST00000587295 THOC2Q8NI27 1593 aaKnown RBP14.62□□□□□ -0.07
ITGA2B-202ENST00000587295 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
ITGA2B-202ENST00000587295 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
ITGA2B-202ENST00000587295 CUX1P39880 1505 aa14.6□□□□□ -0.07
ITGA2B-202ENST00000587295 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
ITGA2B-202ENST00000587295 URB2Q14146 1524 aaKnown RBP14.58□□□□□ -0.08
ITGA2B-202ENST00000587295 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
ITGA2B-202ENST00000587295 CHIC1Q5VXU3 224 aa14.57□□□□□ -0.08
ITGA2B-202ENST00000587295 WDR62O43379 1518 aa14.56□□□□□ -0.08
ITGA2B-202ENST00000587295 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.08
ITGA2B-202ENST00000587295 POLA1P09884 1462 aaPredicted RBP14.47□□□□□ -0.09
ITGA2B-202ENST00000587295 SOGA1O94964 1423 aa14.42□□□□□ -0.1
ITGA2B-202ENST00000587295 RAD54L2Q9Y4B4 1467 aa14.42□□□□□ -0.1
ITGA2B-202ENST00000587295 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
ITGA2B-202ENST00000587295 CUX2O14529 1486 aa14.4□□□□□ -0.1
ITGA2B-202ENST00000587295 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
ITGA2B-202ENST00000587295 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
ITGA2B-202ENST00000587295 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
ITGA2B-202ENST00000587295 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
ITGA2B-202ENST00000587295 FAM9AQ8IZU1 332 aaPredicted RBP14.34□□□□□ -0.11
ITGA2B-202ENST00000587295 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.12
ITGA2B-202ENST00000587295 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
ITGA2B-202ENST00000587295 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
ITGA2B-202ENST00000587295 TDRD9Q8NDG6 1382 aaKnown RBP14.29□□□□□ -0.12
ITGA2B-202ENST00000587295 EEA1Q15075 1411 aa14.29□□□□□ -0.12
ITGA2B-202ENST00000587295 ZNF608Q9ULD9 1512 aaPredicted RBP14.29□□□□□ -0.12
ITGA2B-202ENST00000587295 GAPVD1Q14C86 1478 aa14.28□□□□□ -0.12
ITGA2B-202ENST00000587295 RUSC2Q8N2Y8 1516 aa14.27□□□□□ -0.12
ITGA2B-202ENST00000587295 AQRO60306 1485 aaKnown RBP eCLIP14.26□□□□□ -0.135e-6■■□□□ 14.3
ITGA2B-202ENST00000587295 CUL7Q14999 1698 aa14.23□□□□□ -0.13
ITGA2B-202ENST00000587295 GRIN2BQ13224 1484 aa14.22□□□□□ -0.13
ITGA2B-202ENST00000587295 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.13
ITGA2B-202ENST00000587295 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
ITGA2B-202ENST00000587295 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
ITGA2B-202ENST00000587295 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
ITGA2B-202ENST00000587295 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
ITGA2B-202ENST00000587295 KIF21BO75037 1637 aa14.15□□□□□ -0.14
ITGA2B-202ENST00000587295 MAGI1Q96QZ7 1491 aaPredicted RBP14.14□□□□□ -0.15
ITGA2B-202ENST00000587295 CHD1O14646 1710 aa14.13□□□□□ -0.15
ITGA2B-202ENST00000587295 IGF1RP08069 1367 aa14.12□□□□□ -0.15
ITGA2B-202ENST00000587295 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
ITGA2B-202ENST00000587295 FBLN2P98095 1184 aa14.11□□□□□ -0.15
ITGA2B-202ENST00000587295 GOLGA3Q08378 1498 aa14.11□□□□□ -0.15
ITGA2B-202ENST00000587295 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
ITGA2B-202ENST00000587295 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
ITGA2B-202ENST00000587295 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
ITGA2B-202ENST00000587295 CTTNBP2Q8WZ74 1663 aa14.07□□□□□ -0.16
ITGA2B-202ENST00000587295 PRXQ9BXM0 1461 aa14.07□□□□□ -0.16
ITGA2B-202ENST00000587295 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
ITGA2B-202ENST00000587295 UBTFP17480 764 aaKnown RBP14.06□□□□□ -0.16
ITGA2B-202ENST00000587295 GRIN2AQ12879 1464 aa14.05□□□□□ -0.16
ITGA2B-202ENST00000587295 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
ITGA2B-202ENST00000587295 RANGAP1P46060 587 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms