RNA–Protein interactions for RNA: ENST00000587094.2

PTBP1-211, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 273 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-211ENST00000587094 NISCHQ9Y2I1 1504 aa28.74■■■□□ 2.19
PTBP1-211ENST00000587094 CCDC180Q9P1Z9 1646 aa25.72■■□□□ 1.71
PTBP1-211ENST00000587094 ABCC9O60706 1549 aa25.6■■□□□ 1.69
PTBP1-211ENST00000587094 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
PTBP1-211ENST00000587094 NACADO15069 1562 aa24.21■■□□□ 1.47
PTBP1-211ENST00000587094 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.46
PTBP1-211ENST00000587094 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
PTBP1-211ENST00000587094 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
PTBP1-211ENST00000587094 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
PTBP1-211ENST00000587094 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
PTBP1-211ENST00000587094 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
PTBP1-211ENST00000587094 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
PTBP1-211ENST00000587094 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
PTBP1-211ENST00000587094 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
PTBP1-211ENST00000587094 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
PTBP1-211ENST00000587094 CC2D2AQ9P2K1 1620 aa23.13■■□□□ 1.29
PTBP1-211ENST00000587094 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
PTBP1-211ENST00000587094 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
PTBP1-211ENST00000587094 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
PTBP1-211ENST00000587094 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
PTBP1-211ENST00000587094 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
PTBP1-211ENST00000587094 SMARCA2P51531 1590 aa22.26■■□□□ 1.15
PTBP1-211ENST00000587094 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
PTBP1-211ENST00000587094 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
PTBP1-211ENST00000587094 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
PTBP1-211ENST00000587094 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.13
PTBP1-211ENST00000587094 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
PTBP1-211ENST00000587094 NESP48681 1621 aa22.08■■□□□ 1.13
PTBP1-211ENST00000587094 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
PTBP1-211ENST00000587094 WIZO95785 1651 aa22.01■■□□□ 1.11
PTBP1-211ENST00000587094 CUX2O14529 1486 aa21.87■■□□□ 1.09
PTBP1-211ENST00000587094 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
PTBP1-211ENST00000587094 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
PTBP1-211ENST00000587094 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
PTBP1-211ENST00000587094 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
PTBP1-211ENST00000587094 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
PTBP1-211ENST00000587094 DNAJC5Q9H3Z4 198 aa21.66■■□□□ 1.06
PTBP1-211ENST00000587094 PDS5BQ9NTI5 1447 aa21.64■■□□□ 1.06
PTBP1-211ENST00000587094 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.05
PTBP1-211ENST00000587094 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.03
PTBP1-211ENST00000587094 CFTRP13569 1480 aa21.48■■□□□ 1.03
PTBP1-211ENST00000587094 FANCD2Q9BXW9 1451 aa21.47■■□□□ 1.03
PTBP1-211ENST00000587094 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
PTBP1-211ENST00000587094 WDR62O43379 1518 aa21.47■■□□□ 1.03
PTBP1-211ENST00000587094 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
PTBP1-211ENST00000587094 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
PTBP1-211ENST00000587094 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
PTBP1-211ENST00000587094 TOPBP1Q92547 1522 aa21.11■□□□□ 0.97
PTBP1-211ENST00000587094 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
PTBP1-211ENST00000587094 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
PTBP1-211ENST00000587094 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
PTBP1-211ENST00000587094 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
PTBP1-211ENST00000587094 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
PTBP1-211ENST00000587094 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
PTBP1-211ENST00000587094 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
PTBP1-211ENST00000587094 POLA1P09884 1462 aaPredicted RBP20.9■□□□□ 0.94
PTBP1-211ENST00000587094 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
PTBP1-211ENST00000587094 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
PTBP1-211ENST00000587094 AQRO60306 1485 aaKnown RBP eCLIP20.87■□□□□ 0.933e-8■■■■■ 32.8
PTBP1-211ENST00000587094 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
PTBP1-211ENST00000587094 CUX1P39880 1505 aa20.85■□□□□ 0.93
PTBP1-211ENST00000587094 CHD1O14646 1710 aa20.83■□□□□ 0.92
PTBP1-211ENST00000587094 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
PTBP1-211ENST00000587094 SOGA1O94964 1423 aa20.78■□□□□ 0.92
PTBP1-211ENST00000587094 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
PTBP1-211ENST00000587094 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
PTBP1-211ENST00000587094 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
PTBP1-211ENST00000587094 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
PTBP1-211ENST00000587094 WDR97A6NE52 1622 aa20.72■□□□□ 0.91
PTBP1-211ENST00000587094 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
PTBP1-211ENST00000587094 FBLN2P98095 1184 aa20.65■□□□□ 0.9
PTBP1-211ENST00000587094 PBRM1Q86U86 1689 aa20.64■□□□□ 0.89
PTBP1-211ENST00000587094 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
PTBP1-211ENST00000587094 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
PTBP1-211ENST00000587094 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
PTBP1-211ENST00000587094 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
PTBP1-211ENST00000587094 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
PTBP1-211ENST00000587094 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
PTBP1-211ENST00000587094 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
PTBP1-211ENST00000587094 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
PTBP1-211ENST00000587094 MAGI1Q96QZ7 1491 aaPredicted RBP20.53■□□□□ 0.88
PTBP1-211ENST00000587094 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
PTBP1-211ENST00000587094 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.873e-6■■■■□ 22.3
PTBP1-211ENST00000587094 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
PTBP1-211ENST00000587094 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
PTBP1-211ENST00000587094 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
PTBP1-211ENST00000587094 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
PTBP1-211ENST00000587094 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
PTBP1-211ENST00000587094 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
PTBP1-211ENST00000587094 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
PTBP1-211ENST00000587094 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
PTBP1-211ENST00000587094 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.84
PTBP1-211ENST00000587094 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
PTBP1-211ENST00000587094 NUP160Q12769 1436 aa20.23■□□□□ 0.83
PTBP1-211ENST00000587094 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
PTBP1-211ENST00000587094 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
PTBP1-211ENST00000587094 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
PTBP1-211ENST00000587094 IGF1RP08069 1367 aa20.07■□□□□ 0.8
PTBP1-211ENST00000587094 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
PTBP1-211ENST00000587094 CUL7Q14999 1698 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms