RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
DNMT1-211ENST00000586988 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
DNMT1-211ENST00000586988 ABCC9O60706 1549 aa23.37■■□□□ 1.33
DNMT1-211ENST00000586988 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
DNMT1-211ENST00000586988 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
DNMT1-211ENST00000586988 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
DNMT1-211ENST00000586988 NACADO15069 1562 aa22.89■■□□□ 1.26
DNMT1-211ENST00000586988 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
DNMT1-211ENST00000586988 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
DNMT1-211ENST00000586988 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
DNMT1-211ENST00000586988 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
DNMT1-211ENST00000586988 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
DNMT1-211ENST00000586988 BICRAQ9NZM4 1560 aa22.02■■□□□ 1.12
DNMT1-211ENST00000586988 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
DNMT1-211ENST00000586988 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
DNMT1-211ENST00000586988 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
DNMT1-211ENST00000586988 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
DNMT1-211ENST00000586988 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
DNMT1-211ENST00000586988 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
DNMT1-211ENST00000586988 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.01
DNMT1-211ENST00000586988 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
DNMT1-211ENST00000586988 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
DNMT1-211ENST00000586988 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
DNMT1-211ENST00000586988 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
DNMT1-211ENST00000586988 CC2D2AQ9P2K1 1620 aa21.2■□□□□ 0.98
DNMT1-211ENST00000586988 WIZO95785 1651 aa21.15■□□□□ 0.98
DNMT1-211ENST00000586988 ATAD2BQ9ULI0 1458 aa21.14■□□□□ 0.98
DNMT1-211ENST00000586988 HMGXB3Q12766 1538 aa21.08■□□□□ 0.96
DNMT1-211ENST00000586988 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
DNMT1-211ENST00000586988 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
DNMT1-211ENST00000586988 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
DNMT1-211ENST00000586988 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
DNMT1-211ENST00000586988 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
DNMT1-211ENST00000586988 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
DNMT1-211ENST00000586988 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
DNMT1-211ENST00000586988 CFTRP13569 1480 aa20.48■□□□□ 0.87
DNMT1-211ENST00000586988 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
DNMT1-211ENST00000586988 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
DNMT1-211ENST00000586988 NESP48681 1621 aa20.36■□□□□ 0.85
DNMT1-211ENST00000586988 PDS5BQ9NTI5 1447 aa20.29■□□□□ 0.84
DNMT1-211ENST00000586988 FANCD2Q9BXW9 1451 aa20.25■□□□□ 0.83
DNMT1-211ENST00000586988 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
DNMT1-211ENST00000586988 KIF21AQ7Z4S6 1674 aa20.2■□□□□ 0.82
DNMT1-211ENST00000586988 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
DNMT1-211ENST00000586988 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
DNMT1-211ENST00000586988 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
DNMT1-211ENST00000586988 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
DNMT1-211ENST00000586988 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
DNMT1-211ENST00000586988 BIVM-ERCC5R4GMW8 1640 aa20.03■□□□□ 0.8
DNMT1-211ENST00000586988 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
DNMT1-211ENST00000586988 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
DNMT1-211ENST00000586988 CUX1P39880 1505 aa20.02■□□□□ 0.79
DNMT1-211ENST00000586988 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
DNMT1-211ENST00000586988 WDR62O43379 1518 aa20■□□□□ 0.79
DNMT1-211ENST00000586988 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
DNMT1-211ENST00000586988 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
DNMT1-211ENST00000586988 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
DNMT1-211ENST00000586988 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
DNMT1-211ENST00000586988 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
DNMT1-211ENST00000586988 CUX2O14529 1486 aa19.79■□□□□ 0.76
DNMT1-211ENST00000586988 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
DNMT1-211ENST00000586988 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
DNMT1-211ENST00000586988 SOGA1O94964 1423 aa19.75■□□□□ 0.75
DNMT1-211ENST00000586988 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
DNMT1-211ENST00000586988 ABCA10Q8WWZ4 1543 aa19.73■□□□□ 0.75
DNMT1-211ENST00000586988 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
DNMT1-211ENST00000586988 EEA1Q15075 1411 aa19.65■□□□□ 0.74
DNMT1-211ENST00000586988 KIF27Q86VH2 1401 aa19.65■□□□□ 0.74
DNMT1-211ENST00000586988 ABCA5Q8WWZ7 1642 aa19.63■□□□□ 0.73
DNMT1-211ENST00000586988 EIF4G3O43432 1585 aaKnown RBP19.59■□□□□ 0.73
DNMT1-211ENST00000586988 GAPVD1Q14C86 1478 aa19.56■□□□□ 0.72
DNMT1-211ENST00000586988 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
DNMT1-211ENST00000586988 PBRM1Q86U86 1689 aa19.54■□□□□ 0.72
DNMT1-211ENST00000586988 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
DNMT1-211ENST00000586988 ERICH3Q5RHP9 1530 aa19.52■□□□□ 0.72
DNMT1-211ENST00000586988 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
DNMT1-211ENST00000586988 GRIN2BQ13224 1484 aa19.51■□□□□ 0.71
DNMT1-211ENST00000586988 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.712e-7■■■■■ 31
DNMT1-211ENST00000586988 CUL7Q14999 1698 aa19.48■□□□□ 0.71
DNMT1-211ENST00000586988 FAM9AQ8IZU1 332 aaPredicted RBP19.43■□□□□ 0.7
DNMT1-211ENST00000586988 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
DNMT1-211ENST00000586988 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
DNMT1-211ENST00000586988 IGF1RP08069 1367 aa19.42■□□□□ 0.7
DNMT1-211ENST00000586988 ADAMTS12P58397 1594 aa19.41■□□□□ 0.7
DNMT1-211ENST00000586988 KIF21BO75037 1637 aa19.4■□□□□ 0.7
DNMT1-211ENST00000586988 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
DNMT1-211ENST00000586988 PRXQ9BXM0 1461 aa19.37■□□□□ 0.69
DNMT1-211ENST00000586988 DNAJC5Q9H3Z4 198 aa19.37■□□□□ 0.69
DNMT1-211ENST00000586988 FHAD1B1AJZ9 1412 aa19.36■□□□□ 0.69
DNMT1-211ENST00000586988 CARMIL1Q5VZK9 1371 aa19.35■□□□□ 0.69
DNMT1-211ENST00000586988 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
DNMT1-211ENST00000586988 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
DNMT1-211ENST00000586988 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
DNMT1-211ENST00000586988 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
DNMT1-211ENST00000586988 CHD1O14646 1710 aa19.23■□□□□ 0.67
DNMT1-211ENST00000586988 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
DNMT1-211ENST00000586988 CTTNBP2Q8WZ74 1663 aa19.18■□□□□ 0.66
DNMT1-211ENST00000586988 FBLN2P98095 1184 aa19.16■□□□□ 0.66
DNMT1-211ENST00000586988 NUP160Q12769 1436 aa19.14■□□□□ 0.65
DNMT1-211ENST00000586988 UBTFP17480 764 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms