RNA–Protein interactions for RNA: ENST00000586954.1

LINC00662-203, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,254 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-203ENST00000586954 NISCHQ9Y2I1 1504 aa19.55■□□□□ 0.72
LINC00662-203ENST00000586954 CCDC180Q9P1Z9 1646 aa17.31■□□□□ 0.36
LINC00662-203ENST00000586954 ABCC9O60706 1549 aa16.96■□□□□ 0.31
LINC00662-203ENST00000586954 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
LINC00662-203ENST00000586954 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
LINC00662-203ENST00000586954 NACADO15069 1562 aa16.29■□□□□ 0.2
LINC00662-203ENST00000586954 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.2
LINC00662-203ENST00000586954 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
LINC00662-203ENST00000586954 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
LINC00662-203ENST00000586954 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
LINC00662-203ENST00000586954 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
LINC00662-203ENST00000586954 SCRIBQ14160 1630 aa15.84■□□□□ 0.13
LINC00662-203ENST00000586954 BICRAQ9NZM4 1560 aa15.82■□□□□ 0.12
LINC00662-203ENST00000586954 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
LINC00662-203ENST00000586954 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
LINC00662-203ENST00000586954 EIF4G1Q04637 1599 aaKnown RBP15.39■□□□□ 0.05
LINC00662-203ENST00000586954 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
LINC00662-203ENST00000586954 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
LINC00662-203ENST00000586954 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
LINC00662-203ENST00000586954 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
LINC00662-203ENST00000586954 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
LINC00662-203ENST00000586954 ATAD2BQ9ULI0 1458 aa15.07■□□□□ 0
LINC00662-203ENST00000586954 NCAPD3P42695 1498 aa15.05■□□□□ 0
LINC00662-203ENST00000586954 SMARCA2P51531 1590 aa15.03■□□□□ -0
LINC00662-203ENST00000586954 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
LINC00662-203ENST00000586954 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
LINC00662-203ENST00000586954 HMGXB3Q12766 1538 aa14.95□□□□□ -0.02
LINC00662-203ENST00000586954 BAZ1BQ9UIG0 1483 aaKnown RBP14.94□□□□□ -0.02
LINC00662-203ENST00000586954 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
LINC00662-203ENST00000586954 WIZO95785 1651 aa14.91□□□□□ -0.02
LINC00662-203ENST00000586954 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
LINC00662-203ENST00000586954 NESP48681 1621 aa14.7□□□□□ -0.06
LINC00662-203ENST00000586954 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
LINC00662-203ENST00000586954 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
LINC00662-203ENST00000586954 LAMC3Q9Y6N6 1575 aa14.62□□□□□ -0.07
LINC00662-203ENST00000586954 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
LINC00662-203ENST00000586954 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
LINC00662-203ENST00000586954 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
LINC00662-203ENST00000586954 CFTRP13569 1480 aa14.54□□□□□ -0.08
LINC00662-203ENST00000586954 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
LINC00662-203ENST00000586954 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
LINC00662-203ENST00000586954 FANCD2Q9BXW9 1451 aa14.45□□□□□ -0.1
LINC00662-203ENST00000586954 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
LINC00662-203ENST00000586954 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
LINC00662-203ENST00000586954 CUX2O14529 1486 aa14.4□□□□□ -0.1
LINC00662-203ENST00000586954 PRDM2Q13029 1718 aa14.39□□□□□ -0.11
LINC00662-203ENST00000586954 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
LINC00662-203ENST00000586954 WDR62O43379 1518 aa14.32□□□□□ -0.12
LINC00662-203ENST00000586954 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
LINC00662-203ENST00000586954 CHIC1Q5VXU3 224 aa14.3□□□□□ -0.12
LINC00662-203ENST00000586954 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
LINC00662-203ENST00000586954 ABCC8Q09428 1581 aa14.21□□□□□ -0.13
LINC00662-203ENST00000586954 DNMBPQ6XZF7 1577 aa14.19□□□□□ -0.14
LINC00662-203ENST00000586954 CUX1P39880 1505 aa14.13□□□□□ -0.15
LINC00662-203ENST00000586954 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
LINC00662-203ENST00000586954 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
LINC00662-203ENST00000586954 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
LINC00662-203ENST00000586954 SOGA1O94964 1423 aa14.07□□□□□ -0.16
LINC00662-203ENST00000586954 ZNF608Q9ULD9 1512 aaPredicted RBP14.07□□□□□ -0.16
LINC00662-203ENST00000586954 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
LINC00662-203ENST00000586954 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
LINC00662-203ENST00000586954 TARBP1Q13395 1621 aaKnown RBP14.05□□□□□ -0.16
LINC00662-203ENST00000586954 SYNJ1O43426 1573 aa14.01□□□□□ -0.17
LINC00662-203ENST00000586954 AQRO60306 1485 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00662-203ENST00000586954 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
LINC00662-203ENST00000586954 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
LINC00662-203ENST00000586954 BIVM-ERCC5R4GMW8 1640 aa14□□□□□ -0.17
LINC00662-203ENST00000586954 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
LINC00662-203ENST00000586954 EIF4G3O43432 1585 aaKnown RBP13.97□□□□□ -0.17
LINC00662-203ENST00000586954 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
LINC00662-203ENST00000586954 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
LINC00662-203ENST00000586954 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
LINC00662-203ENST00000586954 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
LINC00662-203ENST00000586954 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
LINC00662-203ENST00000586954 FBLN2P98095 1184 aa13.87□□□□□ -0.19
LINC00662-203ENST00000586954 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
LINC00662-203ENST00000586954 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
LINC00662-203ENST00000586954 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
LINC00662-203ENST00000586954 PBRM1Q86U86 1689 aa13.83□□□□□ -0.2
LINC00662-203ENST00000586954 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
LINC00662-203ENST00000586954 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
LINC00662-203ENST00000586954 CHD1O14646 1710 aa13.81□□□□□ -0.2
LINC00662-203ENST00000586954 SYNJ2O15056 1496 aa13.77□□□□□ -0.2
LINC00662-203ENST00000586954 KIF27Q86VH2 1401 aa13.77□□□□□ -0.21
LINC00662-203ENST00000586954 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
LINC00662-203ENST00000586954 IGF1RP08069 1367 aa13.74□□□□□ -0.21
LINC00662-203ENST00000586954 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
LINC00662-203ENST00000586954 ADAMTS12P58397 1594 aa13.72□□□□□ -0.21
LINC00662-203ENST00000586954 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
LINC00662-203ENST00000586954 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
LINC00662-203ENST00000586954 CARMIL1Q5VZK9 1371 aa13.65□□□□□ -0.22
LINC00662-203ENST00000586954 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
LINC00662-203ENST00000586954 CUL7Q14999 1698 aa13.63□□□□□ -0.23
LINC00662-203ENST00000586954 NUP160Q12769 1436 aa13.63□□□□□ -0.23
LINC00662-203ENST00000586954 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
LINC00662-203ENST00000586954 EEA1Q15075 1411 aa13.62□□□□□ -0.23
LINC00662-203ENST00000586954 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
LINC00662-203ENST00000586954 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
LINC00662-203ENST00000586954 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
LINC00662-203ENST00000586954 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms