RNA–Protein interactions for RNA: ENST00000586797.5

NFIX-206, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-206ENST00000586797 NISCHQ9Y2I1 1504 aa38.4■■■■□ 3.74
NFIX-206ENST00000586797 CCDC180Q9P1Z9 1646 aa33.47■■■□□ 2.95
NFIX-206ENST00000586797 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
NFIX-206ENST00000586797 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
NFIX-206ENST00000586797 ABCC9O60706 1549 aa31.87■■■□□ 2.69
NFIX-206ENST00000586797 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
NFIX-206ENST00000586797 MYO15BQ96JP2 1530 aa31.38■■■□□ 2.61
NFIX-206ENST00000586797 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
NFIX-206ENST00000586797 NACADO15069 1562 aa31.26■■■□□ 2.6
NFIX-206ENST00000586797 RB1CC1Q8TDY2 1594 aa31.02■■■□□ 2.56
NFIX-206ENST00000586797 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
NFIX-206ENST00000586797 UNC13AQ9UPW8 1703 aa30.34■■■□□ 2.45
NFIX-206ENST00000586797 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
NFIX-206ENST00000586797 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.41
NFIX-206ENST00000586797 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
NFIX-206ENST00000586797 CECR2Q9BXF3 1484 aa29.88■■■□□ 2.37
NFIX-206ENST00000586797 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
NFIX-206ENST00000586797 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
NFIX-206ENST00000586797 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
NFIX-206ENST00000586797 SMARCA4P51532 1647 aa29.52■■■□□ 2.32
NFIX-206ENST00000586797 WIZO95785 1651 aa29.41■■■□□ 2.3
NFIX-206ENST00000586797 EIF4G1Q04637 1599 aaKnown RBP29.19■■■□□ 2.26
NFIX-206ENST00000586797 PEG3Q9GZU2 1588 aa29.14■■■□□ 2.26
NFIX-206ENST00000586797 ATAD2BQ9ULI0 1458 aa29.1■■■□□ 2.25
NFIX-206ENST00000586797 TOP2AP11388 1531 aaKnown RBP29.09■■■□□ 2.25
NFIX-206ENST00000586797 SMARCA2P51531 1590 aa29.07■■■□□ 2.24
NFIX-206ENST00000586797 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
NFIX-206ENST00000586797 NCAPD3P42695 1498 aa28.88■■■□□ 2.21
NFIX-206ENST00000586797 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
NFIX-206ENST00000586797 CC2D2AQ9P2K1 1620 aa28.8■■■□□ 2.2
NFIX-206ENST00000586797 HMGXB3Q12766 1538 aa28.78■■■□□ 2.2
NFIX-206ENST00000586797 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
NFIX-206ENST00000586797 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
NFIX-206ENST00000586797 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
NFIX-206ENST00000586797 CFTRP13569 1480 aa28.2■■■□□ 2.11
NFIX-206ENST00000586797 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
NFIX-206ENST00000586797 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
NFIX-206ENST00000586797 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
NFIX-206ENST00000586797 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
NFIX-206ENST00000586797 NESP48681 1621 aa27.94■■■□□ 2.06
NFIX-206ENST00000586797 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
NFIX-206ENST00000586797 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
NFIX-206ENST00000586797 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
NFIX-206ENST00000586797 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
NFIX-206ENST00000586797 TOP2BQ02880 1626 aa27.76■■■□□ 2.04
NFIX-206ENST00000586797 CUX1P39880 1505 aa27.74■■■□□ 2.03
NFIX-206ENST00000586797 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
NFIX-206ENST00000586797 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
NFIX-206ENST00000586797 LOC105371045A0A1W2PR82 267 aa27.67■■■□□ 2.02
NFIX-206ENST00000586797 SOGA1O94964 1423 aa27.65■■■□□ 2.02
NFIX-206ENST00000586797 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
NFIX-206ENST00000586797 RUSC2Q8N2Y8 1516 aa27.55■■■□□ 2
NFIX-206ENST00000586797 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
NFIX-206ENST00000586797 EEA1Q15075 1411 aa27.54■■■□□ 2
NFIX-206ENST00000586797 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
NFIX-206ENST00000586797 TOPBP1Q92547 1522 aa27.5■■□□□ 1.99
NFIX-206ENST00000586797 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
NFIX-206ENST00000586797 FGD5Q6ZNL6 1462 aa27.47■■□□□ 1.99
NFIX-206ENST00000586797 URB2Q14146 1524 aaKnown RBP27.47■■□□□ 1.99
NFIX-206ENST00000586797 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.98
NFIX-206ENST00000586797 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
NFIX-206ENST00000586797 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
NFIX-206ENST00000586797 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
NFIX-206ENST00000586797 KIF27Q86VH2 1401 aa27.34■■□□□ 1.97
NFIX-206ENST00000586797 RAD54L2Q9Y4B4 1467 aa27.3■■□□□ 1.96
NFIX-206ENST00000586797 CUX2O14529 1486 aa27.29■■□□□ 1.96
NFIX-206ENST00000586797 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
NFIX-206ENST00000586797 WDR62O43379 1518 aa27.18■■□□□ 1.94
NFIX-206ENST00000586797 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
NFIX-206ENST00000586797 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
NFIX-206ENST00000586797 KIF21BO75037 1637 aa27.15■■□□□ 1.94
NFIX-206ENST00000586797 IGF1RP08069 1367 aa27.14■■□□□ 1.93
NFIX-206ENST00000586797 THOC2Q8NI27 1593 aaKnown RBP27.1■■□□□ 1.93
NFIX-206ENST00000586797 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
NFIX-206ENST00000586797 TNIKQ9UKE5 1360 aa27.08■■□□□ 1.93
NFIX-206ENST00000586797 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
NFIX-206ENST00000586797 TDRD9Q8NDG6 1382 aaKnown RBP27.07■■□□□ 1.92
NFIX-206ENST00000586797 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
NFIX-206ENST00000586797 TARBP1Q13395 1621 aaKnown RBP27.07■■□□□ 1.92
NFIX-206ENST00000586797 IFT140Q96RY7 1462 aa27.01■■□□□ 1.91
NFIX-206ENST00000586797 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
NFIX-206ENST00000586797 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
NFIX-206ENST00000586797 GAPVD1Q14C86 1478 aa26.99■■□□□ 1.91
NFIX-206ENST00000586797 ABCA5Q8WWZ7 1642 aa26.96■■□□□ 1.91
NFIX-206ENST00000586797 CEP162Q5TB80 1403 aa26.91■■□□□ 1.9
NFIX-206ENST00000586797 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.98e-7■■■■□ 22.8
NFIX-206ENST00000586797 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
NFIX-206ENST00000586797 CUL7Q14999 1698 aa26.84■■□□□ 1.89
NFIX-206ENST00000586797 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
NFIX-206ENST00000586797 RANGAP1P46060 587 aaPredicted RBP26.77■■□□□ 1.88
NFIX-206ENST00000586797 PBRM1Q86U86 1689 aa26.77■■□□□ 1.88
NFIX-206ENST00000586797 CLIP1P30622 1438 aa26.74■■□□□ 1.87
NFIX-206ENST00000586797 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
NFIX-206ENST00000586797 FHAD1B1AJZ9 1412 aa26.69■■□□□ 1.86
NFIX-206ENST00000586797 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
NFIX-206ENST00000586797 SNAPC4Q5SXM2 1469 aa26.61■■□□□ 1.85
NFIX-206ENST00000586797 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
NFIX-206ENST00000586797 CTTNBP2Q8WZ74 1663 aa26.51■■□□□ 1.83
NFIX-206ENST00000586797 CHMP7Q8WUX9 453 aaPredicted RBP26.5■■□□□ 1.83
NFIX-206ENST00000586797 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms