RNA–Protein interactions for RNA: ENST00000586768.1

CDIP1-211, Transcript of cell death inducing p53 target 1, humanhuman

TSL 4

Gene CDIP1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-211ENST00000586768 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
CDIP1-211ENST00000586768 ABCC9O60706 1549 aa29.25■■■□□ 2.27
CDIP1-211ENST00000586768 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
CDIP1-211ENST00000586768 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
CDIP1-211ENST00000586768 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
CDIP1-211ENST00000586768 NACADO15069 1562 aa27.25■■□□□ 1.95
CDIP1-211ENST00000586768 PABPN1Q86U42 306 aaKnown RBP eCLIP27.15■■□□□ 1.94
CDIP1-211ENST00000586768 UNC13AQ9UPW8 1703 aa26.98■■□□□ 1.91
CDIP1-211ENST00000586768 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
CDIP1-211ENST00000586768 BICRAQ9NZM4 1560 aa26.82■■□□□ 1.88
CDIP1-211ENST00000586768 MYO15BQ96JP2 1530 aa26.68■■□□□ 1.86
CDIP1-211ENST00000586768 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
CDIP1-211ENST00000586768 CC2D2AQ9P2K1 1620 aa26.42■■□□□ 1.82
CDIP1-211ENST00000586768 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
CDIP1-211ENST00000586768 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
CDIP1-211ENST00000586768 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
CDIP1-211ENST00000586768 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
CDIP1-211ENST00000586768 ZCCHC6Q5VYS8 1495 aaKnown RBP26.03■■□□□ 1.76
CDIP1-211ENST00000586768 SCRIBQ14160 1630 aa26■■□□□ 1.75
CDIP1-211ENST00000586768 CUX2O14529 1486 aa25.51■■□□□ 1.67
CDIP1-211ENST00000586768 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
CDIP1-211ENST00000586768 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
CDIP1-211ENST00000586768 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
CDIP1-211ENST00000586768 NESP48681 1621 aa24.95■■□□□ 1.58
CDIP1-211ENST00000586768 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
CDIP1-211ENST00000586768 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
CDIP1-211ENST00000586768 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
CDIP1-211ENST00000586768 TRIM41Q8WV44 630 aa24.79■■□□□ 1.56
CDIP1-211ENST00000586768 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
CDIP1-211ENST00000586768 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
CDIP1-211ENST00000586768 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
CDIP1-211ENST00000586768 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
CDIP1-211ENST00000586768 PDS5BQ9NTI5 1447 aa24.58■■□□□ 1.53
CDIP1-211ENST00000586768 PEG3Q9GZU2 1588 aa24.57■■□□□ 1.52
CDIP1-211ENST00000586768 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
CDIP1-211ENST00000586768 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
CDIP1-211ENST00000586768 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
CDIP1-211ENST00000586768 WDR62O43379 1518 aa24.35■■□□□ 1.49
CDIP1-211ENST00000586768 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.49
CDIP1-211ENST00000586768 OSCARQ8IYS5 282 aa24.27■■□□□ 1.48
CDIP1-211ENST00000586768 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.46
CDIP1-211ENST00000586768 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
CDIP1-211ENST00000586768 WIZO95785 1651 aa24.01■■□□□ 1.43
CDIP1-211ENST00000586768 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
CDIP1-211ENST00000586768 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
CDIP1-211ENST00000586768 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
CDIP1-211ENST00000586768 CFTRP13569 1480 aa23.95■■□□□ 1.42
CDIP1-211ENST00000586768 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
CDIP1-211ENST00000586768 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
CDIP1-211ENST00000586768 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
CDIP1-211ENST00000586768 ZNF608Q9ULD9 1512 aaPredicted RBP23.73■■□□□ 1.39
CDIP1-211ENST00000586768 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
CDIP1-211ENST00000586768 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
CDIP1-211ENST00000586768 PRDM2Q13029 1718 aa23.64■■□□□ 1.38
CDIP1-211ENST00000586768 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.38
CDIP1-211ENST00000586768 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
CDIP1-211ENST00000586768 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
CDIP1-211ENST00000586768 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
CDIP1-211ENST00000586768 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
CDIP1-211ENST00000586768 CHD1O14646 1710 aa23.51■■□□□ 1.35
CDIP1-211ENST00000586768 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
CDIP1-211ENST00000586768 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
CDIP1-211ENST00000586768 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
CDIP1-211ENST00000586768 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
CDIP1-211ENST00000586768 FBLN2P98095 1184 aa23.4■■□□□ 1.34
CDIP1-211ENST00000586768 TARBP1Q13395 1621 aaKnown RBP23.4■■□□□ 1.34
CDIP1-211ENST00000586768 DNMBPQ6XZF7 1577 aa23.39■■□□□ 1.33
CDIP1-211ENST00000586768 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
CDIP1-211ENST00000586768 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
CDIP1-211ENST00000586768 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
CDIP1-211ENST00000586768 RAD54L2Q9Y4B4 1467 aa23.18■■□□□ 1.3
CDIP1-211ENST00000586768 SOGA1O94964 1423 aa23.16■■□□□ 1.3
CDIP1-211ENST00000586768 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
CDIP1-211ENST00000586768 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
CDIP1-211ENST00000586768 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
CDIP1-211ENST00000586768 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
CDIP1-211ENST00000586768 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
CDIP1-211ENST00000586768 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
CDIP1-211ENST00000586768 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
CDIP1-211ENST00000586768 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
CDIP1-211ENST00000586768 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
CDIP1-211ENST00000586768 CUX1P39880 1505 aa22.88■■□□□ 1.25
CDIP1-211ENST00000586768 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
CDIP1-211ENST00000586768 ERCC6L2Q5T890 1561 aa22.81■■□□□ 1.24
CDIP1-211ENST00000586768 KIF13AQ9H1H9 1805 aa22.74■■□□□ 1.23
CDIP1-211ENST00000586768 ABCA5Q8WWZ7 1642 aa22.74■■□□□ 1.23
CDIP1-211ENST00000586768 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
CDIP1-211ENST00000586768 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
CDIP1-211ENST00000586768 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
CDIP1-211ENST00000586768 NUP160Q12769 1436 aa22.68■■□□□ 1.22
CDIP1-211ENST00000586768 SHROOM2Q13796 1616 aa22.66■■□□□ 1.22
CDIP1-211ENST00000586768 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
CDIP1-211ENST00000586768 FAM69CQ0P6D2 419 aa22.54■■□□□ 1.2
CDIP1-211ENST00000586768 FHAD1B1AJZ9 1412 aa22.54■■□□□ 1.2
CDIP1-211ENST00000586768 KDM4FA0A1W2PPD8 638 aa22.53■■□□□ 1.2
CDIP1-211ENST00000586768 ABCC10Q5T3U5 1492 aa22.53■■□□□ 1.2
CDIP1-211ENST00000586768 ILDR1Q86SU0 546 aaPredicted RBP22.52■■□□□ 1.2
CDIP1-211ENST00000586768 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
CDIP1-211ENST00000586768 PRG4Q92954 1404 aaPredicted RBP22.5■■□□□ 1.19
CDIP1-211ENST00000586768 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms