RNA–Protein interactions for RNA: ENST00000586692.5

GHDC-206, Transcript of GH3 domain containing, humanhuman

TSL 4

Gene GHDC, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-206ENST00000586692 NISCHQ9Y2I1 1504 aa43.93■■■■■ 4.62
GHDC-206ENST00000586692 CCDC180Q9P1Z9 1646 aa39.38■■■■□ 3.89
GHDC-206ENST00000586692 ABCC9O60706 1549 aa39.24■■■■□ 3.87
GHDC-206ENST00000586692 RB1CC1Q8TDY2 1594 aa37.38■■■■□ 3.57
GHDC-206ENST00000586692 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
GHDC-206ENST00000586692 NACADO15069 1562 aa37.11■■■■□ 3.53
GHDC-206ENST00000586692 UNC13AQ9UPW8 1703 aa36.68■■■■□ 3.46
GHDC-206ENST00000586692 MYO15BQ96JP2 1530 aa36.56■■■■□ 3.44
GHDC-206ENST00000586692 PABPN1Q86U42 306 aaKnown RBP eCLIP36.54■■■■□ 3.44
GHDC-206ENST00000586692 DNAJC5BQ9UF47 199 aa36.54■■■■□ 3.44
GHDC-206ENST00000586692 ZCCHC6Q5VYS8 1495 aaKnown RBP36.45■■■■□ 3.43
GHDC-206ENST00000586692 BICRAQ9NZM4 1560 aa36.29■■■■□ 3.4
GHDC-206ENST00000586692 DCAF1Q9Y4B6 1507 aa36.21■■■■□ 3.39
GHDC-206ENST00000586692 SCRIBQ14160 1630 aa36■■■■□ 3.35
GHDC-206ENST00000586692 SHROOM4Q9ULL8 1493 aa35.67■■■■□ 3.3
GHDC-206ENST00000586692 CC2D2AQ9P2K1 1620 aa35.44■■■■□ 3.26
GHDC-206ENST00000586692 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
GHDC-206ENST00000586692 CECR2Q9BXF3 1484 aa35.26■■■■□ 3.23
GHDC-206ENST00000586692 SMARCA4P51532 1647 aa34.29■■■■□ 3.08
GHDC-206ENST00000586692 NCAPD3P42695 1498 aa34.21■■■■□ 3.07
GHDC-206ENST00000586692 ATAD2BQ9ULI0 1458 aa34.2■■■■□ 3.06
GHDC-206ENST00000586692 SMARCA2P51531 1590 aa34.12■■■■□ 3.05
GHDC-206ENST00000586692 BAZ1AQ9NRL2 1556 aaPredicted RBP34.1■■■■□ 3.05
GHDC-206ENST00000586692 HMGXB3Q12766 1538 aa34.04■■■■□ 3.04
GHDC-206ENST00000586692 BAZ1BQ9UIG0 1483 aaKnown RBP33.93■■■■□ 3.02
GHDC-206ENST00000586692 MROH2BQ7Z745 1585 aa33.9■■■■□ 3.02
GHDC-206ENST00000586692 ERCC6Q03468 1493 aa33.85■■■■□ 3.01
GHDC-206ENST00000586692 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
GHDC-206ENST00000586692 NESP48681 1621 aa33.77■■■■□ 3
GHDC-206ENST00000586692 CUX2O14529 1486 aa33.61■■■□□ 2.97
GHDC-206ENST00000586692 WIZO95785 1651 aa33.58■■■□□ 2.97
GHDC-206ENST00000586692 LAMC3Q9Y6N6 1575 aa33.49■■■□□ 2.95
GHDC-206ENST00000586692 KIF21AQ7Z4S6 1674 aa33.42■■■□□ 2.94
GHDC-206ENST00000586692 THOC2Q8NI27 1593 aaKnown RBP33.37■■■□□ 2.93
GHDC-206ENST00000586692 DNAJC5Q9H3Z4 198 aa33.33■■■□□ 2.93
GHDC-206ENST00000586692 PDS5BQ9NTI5 1447 aa33.24■■■□□ 2.91
GHDC-206ENST00000586692 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
GHDC-206ENST00000586692 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
GHDC-206ENST00000586692 TOP2AP11388 1531 aaKnown RBP33.08■■■□□ 2.89
GHDC-206ENST00000586692 MRC2Q9UBG0 1479 aa32.99■■■□□ 2.87
GHDC-206ENST00000586692 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
GHDC-206ENST00000586692 FANCD2Q9BXW9 1451 aa32.9■■■□□ 2.86
GHDC-206ENST00000586692 WDR62O43379 1518 aa32.9■■■□□ 2.86
GHDC-206ENST00000586692 CFTRP13569 1480 aa32.87■■■□□ 2.85
GHDC-206ENST00000586692 PRDM2Q13029 1718 aa32.75■■■□□ 2.83
GHDC-206ENST00000586692 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
GHDC-206ENST00000586692 URB2Q14146 1524 aaKnown RBP32.63■■■□□ 2.81
GHDC-206ENST00000586692 TOPBP1Q92547 1522 aa32.31■■■□□ 2.76
GHDC-206ENST00000586692 DNMBPQ6XZF7 1577 aa32.22■■■□□ 2.75
GHDC-206ENST00000586692 ZNF608Q9ULD9 1512 aaPredicted RBP32.21■■■□□ 2.75
GHDC-206ENST00000586692 IFT140Q96RY7 1462 aa32.21■■■□□ 2.75
GHDC-206ENST00000586692 ABCC8Q09428 1581 aa32.16■■■□□ 2.74
GHDC-206ENST00000586692 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
GHDC-206ENST00000586692 OSCARQ8IYS5 282 aa32.11■■■□□ 2.73
GHDC-206ENST00000586692 EIF4G3O43432 1585 aaKnown RBP32.09■■■□□ 2.73
GHDC-206ENST00000586692 TARBP1Q13395 1621 aaKnown RBP32.03■■■□□ 2.72
GHDC-206ENST00000586692 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
GHDC-206ENST00000586692 POLA1P09884 1462 aaPredicted RBP31.98■■■□□ 2.71
GHDC-206ENST00000586692 AQRO60306 1485 aaKnown RBP eCLIP31.94■■■□□ 2.7
GHDC-206ENST00000586692 RAD54L2Q9Y4B4 1467 aa31.91■■■□□ 2.7
GHDC-206ENST00000586692 CHD1O14646 1710 aa31.88■■■□□ 2.69
GHDC-206ENST00000586692 CUX1P39880 1505 aa31.85■■■□□ 2.69
GHDC-206ENST00000586692 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
GHDC-206ENST00000586692 SOGA1O94964 1423 aa31.82■■■□□ 2.68
GHDC-206ENST00000586692 RIMBP3CA6NJZ7 1639 aa31.8■■■□□ 2.68
GHDC-206ENST00000586692 RIMBP3BA6NNM3 1639 aa31.8■■■□□ 2.68
GHDC-206ENST00000586692 RIMBP3Q9UFD9 1639 aa31.8■■■□□ 2.68
GHDC-206ENST00000586692 TDRD9Q8NDG6 1382 aaKnown RBP31.77■■■□□ 2.68
GHDC-206ENST00000586692 FBLN2P98095 1184 aa31.74■■■□□ 2.67
GHDC-206ENST00000586692 ARHGEF11O15085 1522 aa31.67■■■□□ 2.66
GHDC-206ENST00000586692 WDR97A6NE52 1622 aa31.65■■■□□ 2.66
GHDC-206ENST00000586692 SNAPC4Q5SXM2 1469 aa31.63■■■□□ 2.65
GHDC-206ENST00000586692 PBRM1Q86U86 1689 aa31.56■■■□□ 2.64
GHDC-206ENST00000586692 GRIN2BQ13224 1484 aa31.52■■■□□ 2.64
GHDC-206ENST00000586692 MAGI1Q96QZ7 1491 aaPredicted RBP31.48■■■□□ 2.63
GHDC-206ENST00000586692 GAPVD1Q14C86 1478 aa31.46■■■□□ 2.63
GHDC-206ENST00000586692 CHMP7Q8WUX9 453 aaPredicted RBP31.45■■■□□ 2.63
GHDC-206ENST00000586692 ABCA5Q8WWZ7 1642 aa31.43■■■□□ 2.62
GHDC-206ENST00000586692 CYB5RLQ6IPT4 315 aa31.42■■■□□ 2.62
GHDC-206ENST00000586692 ABCA10Q8WWZ4 1543 aa31.42■■■□□ 2.62
GHDC-206ENST00000586692 BIVM-ERCC5R4GMW8 1640 aa31.41■■■□□ 2.62
GHDC-206ENST00000586692 SYNJ1O43426 1573 aa31.4■■■□□ 2.62
GHDC-206ENST00000586692 SYNJ2O15056 1496 aa31.39■■■□□ 2.62
GHDC-206ENST00000586692 CLASP1Q7Z460 1538 aa31.38■■■□□ 2.61
GHDC-206ENST00000586692 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
GHDC-206ENST00000586692 ARAP1Q96P48 1450 aa31.37■■■□□ 2.61
GHDC-206ENST00000586692 WRNQ14191 1432 aaPredicted RBP eCLIP31.35■■■□□ 2.61
GHDC-206ENST00000586692 ADAMTS12P58397 1594 aa31.19■■■□□ 2.58
GHDC-206ENST00000586692 GRIN2AQ12879 1464 aa31.14■■■□□ 2.57
GHDC-206ENST00000586692 CEP170Q5SW79 1584 aa31.07■■■□□ 2.56
GHDC-206ENST00000586692 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
GHDC-206ENST00000586692 ERICH3Q5RHP9 1530 aa31.04■■■□□ 2.56
GHDC-206ENST00000586692 FHAD1B1AJZ9 1412 aa31.02■■■□□ 2.56
GHDC-206ENST00000586692 ERCC6L2Q5T890 1561 aa30.99■■■□□ 2.55
GHDC-206ENST00000586692 NUP160Q12769 1436 aa30.97■■■□□ 2.55
GHDC-206ENST00000586692 SHROOM2Q13796 1616 aa30.87■■■□□ 2.53
GHDC-206ENST00000586692 RUSC2Q8N2Y8 1516 aa30.76■■■□□ 2.51
GHDC-206ENST00000586692 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
GHDC-206ENST00000586692 PRG4Q92954 1404 aaPredicted RBP30.72■■■□□ 2.51
GHDC-206ENST00000586692 CUL7Q14999 1698 aa30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms