RNA–Protein interactions for RNA: ENST00000586397.5

PRKAR1A-211, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 1,940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-211ENST00000586397 NISCHQ9Y2I1 1504 aa20.23■□□□□ 0.83
PRKAR1A-211ENST00000586397 CCDC180Q9P1Z9 1646 aa17.72■□□□□ 0.43
PRKAR1A-211ENST00000586397 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
PRKAR1A-211ENST00000586397 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.28
PRKAR1A-211ENST00000586397 ABCC9O60706 1549 aa16.75■□□□□ 0.27
PRKAR1A-211ENST00000586397 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
PRKAR1A-211ENST00000586397 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
PRKAR1A-211ENST00000586397 NACADO15069 1562 aa16.5■□□□□ 0.23
PRKAR1A-211ENST00000586397 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
PRKAR1A-211ENST00000586397 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
PRKAR1A-211ENST00000586397 SCRIBQ14160 1630 aa16.22■□□□□ 0.19
PRKAR1A-211ENST00000586397 UNC13AQ9UPW8 1703 aa16■□□□□ 0.15
PRKAR1A-211ENST00000586397 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
PRKAR1A-211ENST00000586397 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
PRKAR1A-211ENST00000586397 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
PRKAR1A-211ENST00000586397 CECR2Q9BXF3 1484 aa15.69■□□□□ 0.1
PRKAR1A-211ENST00000586397 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
PRKAR1A-211ENST00000586397 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
PRKAR1A-211ENST00000586397 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
PRKAR1A-211ENST00000586397 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
PRKAR1A-211ENST00000586397 WIZO95785 1651 aa15.46■□□□□ 0.07
PRKAR1A-211ENST00000586397 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
PRKAR1A-211ENST00000586397 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
PRKAR1A-211ENST00000586397 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
PRKAR1A-211ENST00000586397 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
PRKAR1A-211ENST00000586397 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.05
PRKAR1A-211ENST00000586397 BAZ1BQ9UIG0 1483 aaKnown RBP15.24■□□□□ 0.03
PRKAR1A-211ENST00000586397 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
PRKAR1A-211ENST00000586397 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
PRKAR1A-211ENST00000586397 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
PRKAR1A-211ENST00000586397 CCDC88BA6NC98 1476 aa15.15■□□□□ 0.02
PRKAR1A-211ENST00000586397 CHIC1Q5VXU3 224 aa15.02□□□□□ -0.01
PRKAR1A-211ENST00000586397 CFTRP13569 1480 aa14.86□□□□□ -0.03
PRKAR1A-211ENST00000586397 CADPSQ9ULU8 1353 aa14.81□□□□□ -0.04
PRKAR1A-211ENST00000586397 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
PRKAR1A-211ENST00000586397 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
PRKAR1A-211ENST00000586397 PRDM2Q13029 1718 aa14.79□□□□□ -0.04
PRKAR1A-211ENST00000586397 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
PRKAR1A-211ENST00000586397 WRNQ14191 1432 aaPredicted RBP eCLIP14.74□□□□□ -0.05
PRKAR1A-211ENST00000586397 LAMC3Q9Y6N6 1575 aa14.73□□□□□ -0.05
PRKAR1A-211ENST00000586397 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
PRKAR1A-211ENST00000586397 NESP48681 1621 aa14.67□□□□□ -0.06
PRKAR1A-211ENST00000586397 FANCD2Q9BXW9 1451 aa14.65□□□□□ -0.06
PRKAR1A-211ENST00000586397 TOP2BQ02880 1626 aa14.64□□□□□ -0.07
PRKAR1A-211ENST00000586397 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
PRKAR1A-211ENST00000586397 CUX1P39880 1505 aa14.61□□□□□ -0.07
PRKAR1A-211ENST00000586397 PDS5BQ9NTI5 1447 aa14.6□□□□□ -0.07
PRKAR1A-211ENST00000586397 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
PRKAR1A-211ENST00000586397 EEA1Q15075 1411 aa14.53□□□□□ -0.08
PRKAR1A-211ENST00000586397 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.09
PRKAR1A-211ENST00000586397 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.09
PRKAR1A-211ENST00000586397 SOGA1O94964 1423 aa14.5□□□□□ -0.09
PRKAR1A-211ENST00000586397 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
PRKAR1A-211ENST00000586397 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
PRKAR1A-211ENST00000586397 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.09
PRKAR1A-211ENST00000586397 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
PRKAR1A-211ENST00000586397 RUSC2Q8N2Y8 1516 aa14.43□□□□□ -0.1
PRKAR1A-211ENST00000586397 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
PRKAR1A-211ENST00000586397 POLA1P09884 1462 aaPredicted RBP14.41□□□□□ -0.1
PRKAR1A-211ENST00000586397 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
PRKAR1A-211ENST00000586397 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
PRKAR1A-211ENST00000586397 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
PRKAR1A-211ENST00000586397 KIF27Q86VH2 1401 aa14.38□□□□□ -0.11
PRKAR1A-211ENST00000586397 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
PRKAR1A-211ENST00000586397 WDR62O43379 1518 aa14.36□□□□□ -0.11
PRKAR1A-211ENST00000586397 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
PRKAR1A-211ENST00000586397 CUX2O14529 1486 aa14.35□□□□□ -0.11
PRKAR1A-211ENST00000586397 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
PRKAR1A-211ENST00000586397 KIF21BO75037 1637 aa14.33□□□□□ -0.12
PRKAR1A-211ENST00000586397 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
PRKAR1A-211ENST00000586397 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
PRKAR1A-211ENST00000586397 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
PRKAR1A-211ENST00000586397 GOLGA3Q08378 1498 aa14.3□□□□□ -0.12
PRKAR1A-211ENST00000586397 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
PRKAR1A-211ENST00000586397 PRXQ9BXM0 1461 aa14.27□□□□□ -0.13
PRKAR1A-211ENST00000586397 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
PRKAR1A-211ENST00000586397 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
PRKAR1A-211ENST00000586397 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
PRKAR1A-211ENST00000586397 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
PRKAR1A-211ENST00000586397 IGF1RP08069 1367 aa14.24□□□□□ -0.13
PRKAR1A-211ENST00000586397 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
PRKAR1A-211ENST00000586397 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
PRKAR1A-211ENST00000586397 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
PRKAR1A-211ENST00000586397 TDRD9Q8NDG6 1382 aaKnown RBP14.19□□□□□ -0.14
PRKAR1A-211ENST00000586397 CUL7Q14999 1698 aa14.18□□□□□ -0.14
PRKAR1A-211ENST00000586397 UBTFP17480 764 aaKnown RBP14.17□□□□□ -0.14
PRKAR1A-211ENST00000586397 CARMIL1Q5VZK9 1371 aa14.17□□□□□ -0.14
PRKAR1A-211ENST00000586397 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
PRKAR1A-211ENST00000586397 PBRM1Q86U86 1689 aa14.13□□□□□ -0.15
PRKAR1A-211ENST00000586397 ZNF608Q9ULD9 1512 aaPredicted RBP14.12□□□□□ -0.15
PRKAR1A-211ENST00000586397 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.151e-6■■■■□ 26.2
PRKAR1A-211ENST00000586397 GRIN2BQ13224 1484 aa14.11□□□□□ -0.15
PRKAR1A-211ENST00000586397 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
PRKAR1A-211ENST00000586397 ADAMTS12P58397 1594 aa14.06□□□□□ -0.16
PRKAR1A-211ENST00000586397 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
PRKAR1A-211ENST00000586397 CLIP1P30622 1438 aa14.05□□□□□ -0.16
PRKAR1A-211ENST00000586397 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.17
PRKAR1A-211ENST00000586397 MAGI1Q96QZ7 1491 aaPredicted RBP14.02□□□□□ -0.17
PRKAR1A-211ENST00000586397 CTTNBP2Q8WZ74 1663 aa14□□□□□ -0.17
PRKAR1A-211ENST00000586397 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms