RNA–Protein interactions for RNA: ENST00000586319.5

YIF1B-206, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1B, Length 936 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-206ENST00000586319 NISCHQ9Y2I1 1504 aa42.46■■■■■ 4.39
YIF1B-206ENST00000586319 CCDC180Q9P1Z9 1646 aa37.83■■■■□ 3.65
YIF1B-206ENST00000586319 ABCC9O60706 1549 aa36.87■■■■□ 3.49
YIF1B-206ENST00000586319 RB1CC1Q8TDY2 1594 aa35.6■■■■□ 3.29
YIF1B-206ENST00000586319 NACADO15069 1562 aa35.59■■■■□ 3.29
YIF1B-206ENST00000586319 MYO15BQ96JP2 1530 aa35.52■■■■□ 3.28
YIF1B-206ENST00000586319 ZCCHC6Q5VYS8 1495 aaKnown RBP35.39■■■■□ 3.26
YIF1B-206ENST00000586319 DCAF1Q9Y4B6 1507 aa35.28■■■■□ 3.24
YIF1B-206ENST00000586319 DCAF8L2P0C7V8 631 aa35.17■■■■□ 3.22
YIF1B-206ENST00000586319 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
YIF1B-206ENST00000586319 BICRAQ9NZM4 1560 aa34.49■■■■□ 3.11
YIF1B-206ENST00000586319 SHROOM4Q9ULL8 1493 aa34.38■■■■□ 3.09
YIF1B-206ENST00000586319 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
YIF1B-206ENST00000586319 SCRIBQ14160 1630 aa34.31■■■■□ 3.08
YIF1B-206ENST00000586319 DNAJC5BQ9UF47 199 aa33.87■■■■□ 3.01
YIF1B-206ENST00000586319 EIF4G1Q04637 1599 aaKnown RBP33.59■■■□□ 2.97
YIF1B-206ENST00000586319 CC2D2AQ9P2K1 1620 aa33.41■■■□□ 2.94
YIF1B-206ENST00000586319 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
YIF1B-206ENST00000586319 BAZ1AQ9NRL2 1556 aaPredicted RBP32.94■■■□□ 2.86
YIF1B-206ENST00000586319 SMARCA4P51532 1647 aa32.92■■■□□ 2.86
YIF1B-206ENST00000586319 NCAPD3P42695 1498 aa32.86■■■□□ 2.85
YIF1B-206ENST00000586319 SMARCA2P51531 1590 aa32.79■■■□□ 2.84
YIF1B-206ENST00000586319 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
YIF1B-206ENST00000586319 PEG3Q9GZU2 1588 aa32.75■■■□□ 2.83
YIF1B-206ENST00000586319 HMGXB3Q12766 1538 aa32.7■■■□□ 2.83
YIF1B-206ENST00000586319 MROH2BQ7Z745 1585 aa32.64■■■□□ 2.82
YIF1B-206ENST00000586319 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
YIF1B-206ENST00000586319 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
YIF1B-206ENST00000586319 WIZO95785 1651 aa32.21■■■□□ 2.75
YIF1B-206ENST00000586319 TOP2AP11388 1531 aaKnown RBP32.01■■■□□ 2.72
YIF1B-206ENST00000586319 LAMC3Q9Y6N6 1575 aa31.97■■■□□ 2.71
YIF1B-206ENST00000586319 NESP48681 1621 aa31.88■■■□□ 2.69
YIF1B-206ENST00000586319 CADPSQ9ULU8 1353 aa31.83■■■□□ 2.69
YIF1B-206ENST00000586319 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
YIF1B-206ENST00000586319 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
YIF1B-206ENST00000586319 CUX2O14529 1486 aa31.68■■■□□ 2.66
YIF1B-206ENST00000586319 CFTRP13569 1480 aa31.67■■■□□ 2.66
YIF1B-206ENST00000586319 CCDC88BA6NC98 1476 aa31.57■■■□□ 2.64
YIF1B-206ENST00000586319 THOC2Q8NI27 1593 aaKnown RBP31.54■■■□□ 2.64
YIF1B-206ENST00000586319 KIF21AQ7Z4S6 1674 aa31.52■■■□□ 2.64
YIF1B-206ENST00000586319 FANCD2Q9BXW9 1451 aa31.42■■■□□ 2.62
YIF1B-206ENST00000586319 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
YIF1B-206ENST00000586319 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
YIF1B-206ENST00000586319 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
YIF1B-206ENST00000586319 WDR62O43379 1518 aa31.33■■■□□ 2.61
YIF1B-206ENST00000586319 SUPT5HO00267 1087 aaKnown RBP31.17■■■□□ 2.58
YIF1B-206ENST00000586319 URB2Q14146 1524 aaKnown RBP31.1■■■□□ 2.57
YIF1B-206ENST00000586319 ABCC8Q09428 1581 aa31.03■■■□□ 2.56
YIF1B-206ENST00000586319 TOPBP1Q92547 1522 aa30.92■■■□□ 2.54
YIF1B-206ENST00000586319 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
YIF1B-206ENST00000586319 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
YIF1B-206ENST00000586319 DNAJC5Q9H3Z4 198 aa30.68■■■□□ 2.5
YIF1B-206ENST00000586319 POLA1P09884 1462 aaPredicted RBP30.66■■■□□ 2.5
YIF1B-206ENST00000586319 CUX1P39880 1505 aa30.63■■■□□ 2.49
YIF1B-206ENST00000586319 TARBP1Q13395 1621 aaKnown RBP30.61■■■□□ 2.49
YIF1B-206ENST00000586319 ZNF608Q9ULD9 1512 aaPredicted RBP30.54■■■□□ 2.48
YIF1B-206ENST00000586319 FGD5Q6ZNL6 1462 aa30.54■■■□□ 2.48
YIF1B-206ENST00000586319 WDR97A6NE52 1622 aa30.52■■■□□ 2.48
YIF1B-206ENST00000586319 SOGA1O94964 1423 aa30.49■■■□□ 2.47
YIF1B-206ENST00000586319 EIF4G3O43432 1585 aaKnown RBP30.46■■■□□ 2.47
YIF1B-206ENST00000586319 WRNQ14191 1432 aaPredicted RBP eCLIP30.44■■■□□ 2.46
YIF1B-206ENST00000586319 RAD54L2Q9Y4B4 1467 aa30.43■■■□□ 2.46
YIF1B-206ENST00000586319 TOP2BQ02880 1626 aa30.41■■■□□ 2.46
YIF1B-206ENST00000586319 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
YIF1B-206ENST00000586319 AQRO60306 1485 aaKnown RBP eCLIP30.35■■■□□ 2.458e-7■■■■□ 21.5
YIF1B-206ENST00000586319 ABCA10Q8WWZ4 1543 aa30.34■■■□□ 2.45
YIF1B-206ENST00000586319 SYNJ1O43426 1573 aa30.32■■■□□ 2.44
YIF1B-206ENST00000586319 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
YIF1B-206ENST00000586319 OSCARQ8IYS5 282 aa30.23■■■□□ 2.43
YIF1B-206ENST00000586319 GRIN2BQ13224 1484 aa30.21■■■□□ 2.43
YIF1B-206ENST00000586319 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
YIF1B-206ENST00000586319 ABCA5Q8WWZ7 1642 aa30.18■■■□□ 2.42
YIF1B-206ENST00000586319 GAPVD1Q14C86 1478 aa30.17■■■□□ 2.42
YIF1B-206ENST00000586319 SNAPC4Q5SXM2 1469 aa30.11■■■□□ 2.41
YIF1B-206ENST00000586319 PBRM1Q86U86 1689 aa30.05■■■□□ 2.4
YIF1B-206ENST00000586319 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
YIF1B-206ENST00000586319 CHD1O14646 1710 aa30.02■■■□□ 2.4
YIF1B-206ENST00000586319 ERICH3Q5RHP9 1530 aa29.98■■■□□ 2.39
YIF1B-206ENST00000586319 CHMP7Q8WUX9 453 aaPredicted RBP29.92■■■□□ 2.38
YIF1B-206ENST00000586319 FBLN2P98095 1184 aa29.89■■■□□ 2.38
YIF1B-206ENST00000586319 ADAMTS12P58397 1594 aa29.89■■■□□ 2.38
YIF1B-206ENST00000586319 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
YIF1B-206ENST00000586319 CLASP1Q7Z460 1538 aa29.83■■■□□ 2.37
YIF1B-206ENST00000586319 KIF27Q86VH2 1401 aa29.83■■■□□ 2.37
YIF1B-206ENST00000586319 GRIN2AQ12879 1464 aa29.8■■■□□ 2.36
YIF1B-206ENST00000586319 ARHGEF11O15085 1522 aa29.76■■■□□ 2.36
YIF1B-206ENST00000586319 NUP160Q12769 1436 aa29.73■■■□□ 2.35
YIF1B-206ENST00000586319 RIMBP3CA6NJZ7 1639 aa29.72■■■□□ 2.35
YIF1B-206ENST00000586319 RIMBP3BA6NNM3 1639 aa29.72■■■□□ 2.35
YIF1B-206ENST00000586319 RIMBP3Q9UFD9 1639 aa29.72■■■□□ 2.35
YIF1B-206ENST00000586319 IGF1RP08069 1367 aa29.7■■■□□ 2.35
YIF1B-206ENST00000586319 CUL7Q14999 1698 aa29.66■■■□□ 2.34
YIF1B-206ENST00000586319 CEP170Q5SW79 1584 aa29.61■■■□□ 2.33
YIF1B-206ENST00000586319 TRIM41Q8WV44 630 aa29.55■■■□□ 2.32
YIF1B-206ENST00000586319 ARAP1Q96P48 1450 aa29.51■■■□□ 2.31
YIF1B-206ENST00000586319 CARMIL1Q5VZK9 1371 aa29.51■■■□□ 2.31
YIF1B-206ENST00000586319 SHROOM2Q13796 1616 aa29.5■■■□□ 2.31
YIF1B-206ENST00000586319 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.3
YIF1B-206ENST00000586319 KIAA0586Q9BVV6 1533 aa29.41■■■□□ 2.3
YIF1B-206ENST00000586319 CYB5RLQ6IPT4 315 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms